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Results for MligTC455_26630

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_26630 648 13.49 Mlig455_035293

Neo: Irradiation

Age: -

 SART3 Mlig455_035293 {REF} {Length: 2994} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.2]; Lsm interaction motif [PF05391.13, score=18.2]} {Human: ENSG00000075856, SART3, squamous cell carcinoma antigen recognized by T cells 3, [RH, Score=381, Expect=5e-117]} {Mouse: ENSMUSG00000018974, Sart3, squamous cell carcinoma antigen recognized by T cells 3, [RH, Score=380, Expect=8e-117]} {Celegans: WBGene00007111, sart-3, SART-3/p110 homolog, [RH, Score=221, Expect=3e-60]} {Smed: dd_Smed_v6_6820_1_1, dd_Smed_v6_6820_1_1, [RH, Score=261, Expect=9e-76]} {RNA1509_9456} {RNA1310_5642, RNA1509_9456} {RNA1509_9456, RNA815_2449.1}

Cumulative graph for MligTC455_26630

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.159 4.179 0.89110 1.00000
RegionR2 0.371 4.179 0.44237 0.83151
RegionR3 -0.331 4.179 0.41967 0.94359
RegionR4 0.496 4.179 0.24515 0.54357
RegionR5 0.427 4.179 0.20314 0.49527
RegionR6 -0.102 4.179 0.80159 1.00000
RegionR7 0.009 4.179 0.98634 1.00000
RegionR8 -0.711 4.179 0.38955 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.662 4.179 0.13404 0.86883
RegenerationR2 0.508 4.179 0.17187 0.61141
RegenerationR3 0.911 4.179 0.03614 0.33672
RegenerationR4 0.195 4.179 0.63573 0.92559
RegenerationR5 0.473 4.179 0.19379 0.62562
RegenerationR6 1.337 4.179 0.00147 0.04287
RegenerationBL 0.773 4.179 0.16212 0.48256
RegenerationTP 1.218 4.179 0.04344 0.34596


Genes with expression patterns similar to MligTC455_26630

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_26630 648 13.49 Mlig455_035293

Neo: Irradiation

Age: -

 SART3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_035293 {REF} {Length: 2994} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.2]; Lsm interaction motif [PF05391.13, score=18.2]} {Human: ENSG00000075856, SART3, squamous cell carcinoma antigen recognized by T cells 3, [RH, Score=381, Expect=5e-117]} {Mouse: ENSMUSG00000018974, Sart3, squamous cell carcinoma antigen recognized by T cells 3, [RH, Score=380, Expect=8e-117]} {Celegans: WBGene00007111, sart-3, SART-3/p110 homolog, [RH, Score=221, Expect=3e-60]} {Smed: dd_Smed_v6_6820_1_1, dd_Smed_v6_6820_1_1, [RH, Score=261, Expect=9e-76]} {RNA1509_9456} {RNA1310_5642, RNA1509_9456} {RNA1509_9456, RNA815_2449.1}
2. MligTC455_36413 686 14.29 Mlig455_027517

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.020/0.01741

 DDX10 2.669 - - - 0.953 0.896 0.820 Mlig455_027517 {REF} {Length: 2377} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.1]; Helicase conserved C-terminal domain [PF00271.33, score=84.3]; Domain of unknown function (DUF4217) [PF13959.8, score=39.3]} {Human: ENSG00000178105, DDX10, DEAD-box helicase 10, [RH, Score=430, Expect=2e-138]} {Mouse: ENSMUSG00000053289, Ddx10, DEAD (Asp-Glu-Ala-Asp) box polypeptide 10, [RH, Score=400, Expect=4e-127]} {Dmel: FBgn0030855, CG5800, [RH, Score=384, Expect=7e-122]} {Celegans: WBGene00021277, Y23H5B.6, RNA helicase, [RH, Score=412, Expect=1e-133]} {Smed: dd_Smed_v6_10133_0_1, dd_Smed_v6_10133_0_1, [Score=268, Expect=2e-81]} {RNA1509_10762, RNA1509_41952} {RNA1310_8808, RNA1509_41952} {RNA1509_41952, RNA815_3348.1}
3. MligTC455_45083 956 19.92 Mlig455_065154

Neo: -

Age: -

 PQLC1 1.686 - - - - 0.724 0.962 Mlig455_065154 {REF} {Length: 2802} {Pfam: PQ loop repeat [PF04193.16, score=72.4]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.1]} {Human: ENSG00000122490, PQLC1, PQ loop repeat containing 1, [Score=199, Expect=2e-59]} {Mouse: ENSMUSG00000034006, Pqlc1, PQ loop repeat containing 1, [Score=192, Expect=4e-57]} {Dmel: FBgn0031897, CG13784, [Score=213, Expect=7e-65]} {Celegans: WBGene00011827, T19A6.1, [Score=170, Expect=8e-49]} {Smed: dd_Smed_v6_6419_0_1, dd_Smed_v6_6419_0_1, [Score=180, Expect=3e-53]} {RNA1509_32486} {RNA1310_19086.1} {RNA815_10336.1}
4. MligTC455_30776 1186 24.72 Mlig455_056159, Mlig455_058742

Neo: -

Age: -

 DPAGT1 0.956 - - - - - 0.956

Mlig455_056159 {REF} {Length: 2890} {Pfam: Glycosyl transferase family 4 [PF00953.23, score=129.5]} {Human: ENSG00000172269, DPAGT1, dolichyl-phosphate N-acetylglucosaminephosphotransferase 1, [Score=324, Expect=1e-107]} {Mouse: ENSMUSG00000032123, Dpagt1, dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase), [Score=319, Expect=1e-105]} {Dmel: FBgn0032477, CG5287, [Score=330, Expect=3e-110]} {Celegans: WBGene00013362, algn-7, Asparagine Linked Glycosylation (ALG) homolog, Nematode, [Score=273, Expect=4e-88]} {Smed: dd_Smed_v6_5706_0_1, dd_Smed_v6_5706_0_1, [Score=320, Expect=3e-106]} {RNA1509_12733, RNA1509_21292} {RNA1310_20735.1, RNA1509_21292} {RNA1509_21292, RNA815_8944}

Mlig455_058742 {REF} {Length: 2835} {Pfam: Glycosyl transferase family 4 [PF00953.23, score=129.9]} {Human: ENSG00000172269, DPAGT1, dolichyl-phosphate N-acetylglucosaminephosphotransferase 1, [RH, Score=374, Expect=2e-127]} {Mouse: ENSMUSG00000032123, Dpagt1, dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase), [RH, Score=378, Expect=7e-129]} {Dmel: FBgn0032477, CG5287, [RH, Score=404, Expect=4e-139]} {Celegans: WBGene00013362, algn-7, Asparagine Linked Glycosylation (ALG) homolog, Nematode, [RH, Score=336, Expect=9e-113]} {Smed: dd_Smed_v6_5706_0_1, dd_Smed_v6_5706_0_1, [RH, Score=387, Expect=7e-133]} {RNA1509_12733} {RNA1310_20735.1, RNA1509_12733} {RNA1509_12733, RNA815_8944}

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