TomoSeq data search

Data search

Results for MligTC455_26754

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26754

670

13.95

Mlig455_006793

Neo: -

Age: -

DERL2

Mlig455_006793 {REF} {Length: 3019} {Pfam: Der1-like family [PF04511.17, score=248.9]} {Human: ENSG00000072849, DERL2, derlin 2, [RH, Score=343, Expect=3e-120]} {Mouse: ENSMUSG00000018442, Derl2, Der1-like domain family, member 2, [RH, Score=342, Expect=3e-120]} {Dmel: FBgn0038438, Der-2, Derlin-2, [RH, Score=307, Expect=4e-106]} {Celegans: WBGene00020109, R151.6, Derlin-2, [RH, Score=258, Expect=3e-87]} {Smed: dd_Smed_v6_4313_0_1, dd_Smed_v6_4313_0_1, [RH, Score=339, Expect=2e-119]} {RNA1509_29927} {RNA1310_16865.2} {RNA815_8345}

Cumulative graph for MligTC455_26754

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.367	4.075	0.70406	1.00000
RegionR2	-0.109	4.075	0.80704	1.00000
RegionR3	0.071	4.075	0.83618	1.00000
RegionR4	0.698	4.075	0.06087	0.22035
RegionR5	0.749	4.075	0.01050	0.05986
RegionR6	0.747	4.075	0.02452	0.28563
RegionR7	-1.109	4.075	0.05038	0.43156
RegionR8	-0.682	4.075	0.29794	0.92789

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.841	4.075	0.48232	1.00000
RegenerationR2	-0.245	4.075	0.50844	0.87484
RegenerationR3	-0.061	4.075	0.87585	1.00000
RegenerationR4	-0.473	4.075	0.19451	0.63957
RegenerationR5	-0.374	4.075	0.25586	0.68850
RegenerationR6	-0.323	4.075	0.38779	0.72790
RegenerationBL	0.215	4.075	0.69386	1.00000
RegenerationTP	0.857	4.075	0.14807	0.57208

Genes with expression patterns similar to MligTC455_26754

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26754	670	13.95	Mlig455_006793	Neo: - Age: -	DERL2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_006793 {REF} {Length: 3019} {Pfam: Der1-like family [PF04511.17, score=248.9]} {Human: ENSG00000072849, DERL2, derlin 2, [RH, Score=343, Expect=3e-120]} {Mouse: ENSMUSG00000018442, Derl2, Der1-like domain family, member 2, [RH, Score=342, Expect=3e-120]} {Dmel: FBgn0038438, Der-2, Derlin-2, [RH, Score=307, Expect=4e-106]} {Celegans: WBGene00020109, R151.6, Derlin-2, [RH, Score=258, Expect=3e-87]} {Smed: dd_Smed_v6_4313_0_1, dd_Smed_v6_4313_0_1, [RH, Score=339, Expect=2e-119]} {RNA1509_29927} {RNA1310_16865.2} {RNA815_8345}
2.	MligTC455_48315	926	19.3	Mlig455_020184	Neo: - Age: -		1.767	-	-	0.793	-	0.974	-	Mlig455_020184 {REF} {Length: 1125} {TRANSSPLICED} {RNA1509_28277, RNA1509_36330, RNA1509_38475, RNA1509_55867} {RNA1310_23755.2, RNA1509_28277, RNA1509_36330, RNA1509_38475, RNA1509_55867} {RNA1509_28277, RNA1509_36330, RNA1509_38475, RNA1509_55867, RNA815_13137}
3.	MligTC455_51324	1682	35.04	Mlig455_021908	Neo: - Age: Down-Down-Up	DAB1	0.968	-	-	-	-	0.968	-	Mlig455_021908 {REF} {Length: 2379} {Human: ENSG00000173406, DAB1, DAB1, reelin adaptor protein, [RH, Score=72.8, Expect=3e-13]} {Mouse: ENSMUSG00000028519, Dab1, disabled 1, [RH, Score=72.8, Expect=3e-13]} {Dmel: FBgn0000414, Dab, Disabled, [RH, Score=69.7, Expect=3e-12]} {RNA1509_20226} {RNA1310_12089} {RNA815_6330}
4.	MligTC455_43924	1019	21.24	Mlig455_062976, Mlig455_062983	Neo: - Age: - Region-enriched R3: 2.407/0.00165	SLC5A1, SLC5A11	0.962	-	-	-	-	0.962	-	Mlig455_062976 {REF} {Length: 2681} {Pfam: Sodium:solute symporter family [PF00474.19, score=417.2]} {Human: ENSG00000100170, SLC5A1, solute carrier family 5 member 1, [RH, Score=599, Expect=0.0]; ENSG00000100191, SLC5A4, solute carrier family 5 member 4, [RH, Score=590, Expect=0.0]; ENSG00000140675, SLC5A2, solute carrier family 5 member 2, [RH, Score=587, Expect=0.0]; ENSG00000117834, SLC5A9, solute carrier family 5 member 9, [RH, Score=585, Expect=0.0]; ENSG00000158865, SLC5A11, solute carrier family 5 member 11, [RH, Score=581, Expect=0.0]} {Mouse: ENSMUSG00000030781, Slc5a2, solute carrier family 5 (sodium/glucose cotransporter), member 2, [RH, Score=611, Expect=0.0]; ENSMUSG00000030769, Slc5a11, solute carrier family 5 (sodium/glucose cotransporter), member 11, [RH, Score=602, Expect=0.0]; ENSMUSG00000028544, Slc5a9, solute carrier family 5 (sodium/glucose cotransporter), member 9, [RH, Score=601, Expect=0.0]; ENSMUSG00000011034, Slc5a1, solute carrier family 5 (sodium/glucose cotransporter), member 1, [RH, Score=591, Expect=0.0]} {Dmel: FBgn0017448, CG2187, [Score=99.8, Expect=2e-21]} {Celegans: WBGene00014092, ZK822.5, [Score=70.1, Expect=3e-12]} {Smed: dd_Smed_v6_6663_0_1, dd_Smed_v6_6663_0_1, [RH, Score=773, Expect=0.0]} {RNA1509_19405} {RNA1310_2456.1} {RNA815_1533} Mlig455_062983 {REF} {Length: 2544} {Pfam: Sodium:solute symporter family [PF00474.19, score=394.9]} {Human: ENSG00000158865, SLC5A11, solute carrier family 5 member 11, [RH, Score=540, Expect=0.0]} {Mouse: ENSMUSG00000030781, Slc5a2, solute carrier family 5 (sodium/glucose cotransporter), member 2, [Score=560, Expect=0.0]; ENSMUSG00000030769, Slc5a11, solute carrier family 5 (sodium/glucose cotransporter), member 11, [Score=560, Expect=0.0]; ENSMUSG00000028544, Slc5a9, solute carrier family 5 (sodium/glucose cotransporter), member 9, [Score=558, Expect=0.0]; ENSMUSG00000011034, Slc5a1, solute carrier family 5 (sodium/glucose cotransporter), member 1, [Score=541, Expect=0.0]} {Dmel: FBgn0017448, CG2187, [Score=85.1, Expect=7e-17]} {Celegans: WBGene00014092, ZK822.5, [Score=65.1, Expect=9e-11]} {Smed: dd_Smed_v6_6663_0_1, dd_Smed_v6_6663_0_1, [Score=703, Expect=0.0]} {RNA1509_1500} {RNA1310_2456.1} {RNA815_1533}
5.	MligTC455_48719	1459	30.39	Mlig455_053641	Neo: Int S/G2/M Age: -	COA4	0.96	-	-	-	-	0.960	-	Mlig455_053641 {REF} {Length: 578} {TRANSSPLICED} {Pfam: CHCH domain [PF06747.15, score=23.2]} {Human: ENSG00000181924, COA4, cytochrome c oxidase assembly factor 4 homolog, [RH, Score=63.2, Expect=2e-14]} {Mouse: ENSMUSG00000044881, Coa4, cytochrome c oxidase assembly factor 4, [RH, Score=65.1, Expect=2e-15]} {Dmel: FBgn0265083, CG44194, [RH, Score=62.4, Expect=1e-14]} {Celegans: WBGene00011857, T20D3.3, [RH, Score=63.2, Expect=9e-15]} {Smed: dd_Smed_v6_4811_0_1, dd_Smed_v6_4811_0_1, [RH, Score=62.4, Expect=6e-15]} {RNA1509_11132, RNA1509_14110, RNA1509_17460} {RNA1310_61414, RNA1509_11132, RNA1509_14110, RNA1509_17460} {RNA1509_11132, RNA1509_14110, RNA1509_17460, RNA815_16665.1}
6.	MligTC455_43232	900	18.76	Mlig455_029484	Neo: - Age: Up-Down-Down Region-enriched R4: 2.688/0.00000 Region-enriched R5: 1.195/0.00120		0.959	-	-	-	-	0.959	-	Mlig455_029484 {REF} {Length: 3688} {NoTransDecoderORF} {RNA1509_23440} {RNA1310_2972.1} {RNA815_1921}
7.	MligTC455_39967	921	19.18	Mlig455_062912	Neo: - Age: - Region-enriched R3: 1.504/0.00003 Region-enriched R4: 1.259/0.00444 Regeneration-upregulated R6: 1.477 Regeneration-enriched R6: 1.477	STX6	0.953	-	-	-	-	0.953	-	Mlig455_062912 {REF} {Length: 1682} {TRANSSPLICED} {Pfam: Syntaxin 6, N-terminal [PF09177.13, score=46.8]} {Human: ENSG00000135823, STX6, syntaxin 6, [Score=49.7, Expect=1e-06]} {Mouse: ENSMUSG00000026470, Stx6, syntaxin 6, [Score=52.8, Expect=6e-08]} {RNA1509_18796, RNA1509_20721, RNA1509_27073} {RNA1310_18720, RNA1509_18796, RNA1509_20721, RNA1509_27073} {RNA1509_18796, RNA1509_20721, RNA1509_27073, RNA815_22271}
8.	MligTC455_43856	2916	60.74	Mlig455_014933	Neo: - Age: logFC(26M/2M)=-0.293	LAMP1	0.95	-	-	-	-	0.950	-	Mlig455_014933 {REF} {Length: 2990} {Pfam: Lysosome-associated membrane glycoprotein (Lamp) [PF01299.19, score=68.8]} {Human: ENSG00000185896, LAMP1, lysosomal associated membrane protein 1, [RH, Score=79.7, Expect=2e-15]} {Mouse: ENSMUSG00000031447, Lamp1, lysosomal-associated membrane protein 1, [Score=86.3, Expect=9e-18]} {Dmel: FBgn0032949, Lamp1, [RH, Score=74.7, Expect=2e-14]} {Celegans: WBGene00015471, lmp-2, LAMP (Lysosome-associated membrane protein) homolog, [RH, Score=62.0, Expect=2e-10]} {Smed: dd_Smed_v6_2131_0_1, dd_Smed_v6_2131_0_1, [RH, Score=89.4, Expect=5e-19]} {RNA1509_13766, RNA1509_19357, RNA1509_6939} {RNA1310_13759.1, RNA1509_13766, RNA1509_19357, RNA1509_6939} {RNA1509_13766, RNA1509_19357, RNA1509_6939, RNA815_3563.1}
9.	MligTC455_50019	248	5.17	Mlig455_050542	Neo: Int S/G2/M Age: Up-Up-Down	NSD2	0.95	-	-	-	-	0.950	-	Mlig455_050542 {REF} {Length: 4778} {TRANSSPLICED} {Pfam: PWWP domain [PF00855.19, score=113.6]; SET domain [PF00856.30, score=80.1]; AWS domain [PF17907.3, score=47.6]; PHD-finger [PF00628.31, score=38.8]; NSD Cys-His rich domain [PF17982.3, score=32.8]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [RH, Score=691, Expect=0.0]; ENSG00000165671, NSD1, nuclear receptor binding SET domain protein 1, [RH, Score=667, Expect=0.0]; ENSG00000147548, NSD3, nuclear receptor binding SET domain protein 3, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [RH, Score=696, Expect=0.0]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [RH, Score=431, Expect=1e-130]} {Celegans: WBGene00016603, met-1, Histone-lysine N-methyltransferase, [Score=142, Expect=5e-34]} {Smed: dd_Smed_v6_4755_0_1, dd_Smed_v6_4755_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_8385} {RNA1310_4002, RNA1509_8385} {RNA1509_8385, RNA815_849}

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