Data search


search
Exact
Search

Results for MligTC455_26763

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_26763 52 1.09 Mlig455_036440

Neo: -

Age: -

Mlig455_036440 {REF} {Length: 2037} {Pfam: Protein of unknown function (DUF1104) [PF06518.13, score=21.0]} {RNA1509_33950} {RNA1310_17710.1} {RNA815_10211.1}

Cumulative graph for MligTC455_26763

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.71 1.406 1.00000 1.00000
RegionR2 2.885 1.406 0.12007 0.42917
RegionR3 1.227 1.406 0.50590 0.99691
RegionR4 0.441 1.406 0.41319 0.74029
RegionR5 -0.108 1.406 1.00000 1.00000
RegionR6 -0.447 1.406 0.85201 1.00000
RegionR7 -1.086 1.406 1.00000 1.00000
RegionR8 -1.202 1.406 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.47 1.406 0.80483 1.00000
RegenerationR2 0.787 1.406 0.44051 0.84013
RegenerationR3 2.27 1.406 0.16669 0.60121
RegenerationR4 1.933 1.406 0.13657 0.55697
RegenerationR5 3.013 1.406 0.02360 0.26352
RegenerationR6 3.219 1.406 0.06512 0.32066
RegenerationBL 2.694 1.406 0.21842 0.56523
RegenerationTP 4.003 1.406 0.14303 0.56391


Genes with expression patterns similar to MligTC455_26763

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_26763 52 1.09 Mlig455_036440

Neo: -

Age: -

2 - - 1.000 - 1.000 - Mlig455_036440 {REF} {Length: 2037} {Pfam: Protein of unknown function (DUF1104) [PF06518.13, score=21.0]} {RNA1509_33950} {RNA1310_17710.1} {RNA815_10211.1}
2. MligTC455_15410 34 0.71 Mlig455_061041

Neo: -

Age: -

1.682 - - 0.724 - 0.958 - Mlig455_061041 {REF} {Length: 4341} {RNA1509_2515} {RNA1310_28603.1} {RNA815_3258.1}
3. MligTC455_24826 177 3.68 Mlig455_005537, Mlig455_015620, Mlig455_064145

Neo: -

Age: -

0.982 - - 0.982 - - -

Mlig455_005537 {REF} {Length: 10763} {RNA1509_38546} {RNA1310_25012} {RNA815_19588}

Mlig455_015620 {REF} {Length: 5859} {RNA1509_38546} {RNA1310_25012} {RNA815_56989}

Mlig455_064145 {REF} {Length: 5929} {RNA1509_38546} {RNA1310_25012} {RNA815_56989}
4. MligTC455_38571 152 3.16 Mlig455_065241

Neo: -

Age: -

0.977 - - - - 0.977 - Mlig455_065241 {REF} {Length: 5131} {NoTransDecoderORF} {RNA1509_47593} {RNA1310_10205.1} {RNA815_53866}
5. MligTC455_46954 190 3.96 Mlig455_036122

Neo: -

Age: -

0.971 - - 0.971 - - - Mlig455_036122 {REF} {Length: 1781} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=211.4]; Sulfotransferase family [PF13469.8, score=19.7]} {Smed: dd_Smed_v6_5024_0_1, dd_Smed_v6_5024_0_1, [RH, Score=169, Expect=8e-52]} {RNA1509_33205} {RNA1310_22290.1} {RNA815_9571}
6. MligTC455_17964 63 1.31 Mlig455_025546

Neo: -

Age: -

0.96 - - - - 0.960 - Mlig455_025546 {REF} {Length: 865} {NoTransDecoderORF} {RNA1509_13658} {RNA1310_113576}
7. MligTC455_53544 626 13.04 Mlig455_025841

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.481

HEYL 0.959 - - - - 0.959 - Mlig455_025841 {REF} {Length: 2716} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=42.7]} {Human: ENSG00000163909, HEYL, hes related family bHLH transcription factor with YRPW motif-like, [Score=57.4, Expect=3e-08]; ENSG00000135547, HEY2, hes related family bHLH transcription factor with YRPW motif 2, [Score=55.1, Expect=1e-07]; ENSG00000187821, HELT, helt bHLH transcription factor, [Score=55.1, Expect=1e-07]} {Mouse: ENSMUSG00000032744, Heyl, hairy/enhancer-of-split related with YRPW motif-like, [Score=56.6, Expect=4e-08]; ENSMUSG00000047171, Helt, helt bHLH transcription factor, [Score=55.1, Expect=7e-08]; ENSMUSG00000019789, Hey2, hairy/enhancer-of-split related with YRPW motif 2, [Score=54.7, Expect=2e-07]} {Dmel: FBgn0259938, cwo, clockwork orange, [Score=63.5, Expect=4e-10]} {Celegans: WBGene00015646, mlt-10, [RH, Score=176, Expect=2e-46]} {Smed: dd_Smed_v6_22479_0_1, dd_Smed_v6_22479_0_1, [Score=51.2, Expect=9e-07]} {RNA1509_49122} {RNA1310_18992.1} {RNA815_16883}
8. MligTC455_24588 98 2.04 Mlig455_000332, Mlig455_009566

Neo: -

Age: -

0.956 - - 0.956 - - -

Mlig455_000332 {REF} {Length: 192} {NoTransDecoderORF}

Mlig455_009566 {REF} {Length: 3232} {NoTransDecoderORF} {RNA1509_2485} {RNA1310_20638} {RNA815_131.1}
9. MligTC455_29220 298 6.21 Mlig455_053072

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.724

Region-enriched R2: 2.616/0.03046

0.953 - - 0.953 - - - Mlig455_053072 {REF} {Length: 8981} {Pfam: Helix-turn-helix [PF01381.24, score=36.9]; Kinetoplastid membrane protein 11 [PF03037.18, score=27.5]; Family of unknown function (DUF6374) [PF19901.1, score=26.8]; Domain of unknown function (DUF5053) [PF16476.7, score=26.7]; Maf N-terminal region [PF08383.13, score=19.4]} {RNA1509_50040} {RNA1310_688} {RNA815_433.1}
10. MligTC455_24279 12 0.26 Mlig455_043261

Neo: -

Age: -

Region-enriched R4: 7.255/0.02204

0.952 - - 0.952 - - - Mlig455_043261 {REF} {Length: 4510} {Smed: dd_Smed_v6_4351_0_1, dd_Smed_v6_4351_0_1, [RH, Score=233, Expect=3e-72]} {RNA1509_37187} {RNA1310_9833.1} {RNA815_9014.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA