TomoSeq data search

Data search

Results for MligTC455_26787

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26787

3192

66.50

Mlig455_044005

Neo: -

Age: -

Mlig455_044005 {REF} {Length: 2813} {TRANSSPLICED} {Dmel: FBgn0039113, CG10217, [RH, Score=300, Expect=2e-93]} {Smed: dd_Smed_v6_2624_0_1, dd_Smed_v6_2624_0_1, [RH, Score=557, Expect=0.0]} {RNA1509_2220, RNA1509_23791, RNA1509_39262, RNA1509_40052, RNA1509_42460, RNA1509_52067} {RNA1310_5876, RNA1509_2220, RNA1509_23791, RNA1509_39262, RNA1509_40052, RNA1509_42460, RNA1509_52067} {RNA1509_2220, RNA1509_23791, RNA1509_39262, RNA1509_40052, RNA1509_42460, RNA1509_52067, RNA815_10235.1}

Cumulative graph for MligTC455_26787

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.863	6.068	0.16063	0.78110
RegionR2	0.224	6.068	0.42194	0.81282
RegionR3	-0.37	6.068	0.14091	0.64128
RegionR4	-0.077	6.068	0.79407	1.00000
RegionR5	-0.473	6.068	0.05301	0.19564
RegionR6	0.541	6.068	0.02191	0.26794
RegionR7	0.15	6.068	0.60412	1.00000
RegionR8	0.867	6.068	0.00647	0.14611

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.673	6.068	0.38086	1.00000
RegenerationR2	-0.127	6.068	0.63821	0.93073
RegenerationR3	0.056	6.068	0.84783	0.99768
RegenerationR4	-0.331	6.068	0.26619	0.71365
RegenerationR5	0.274	6.068	0.33415	0.75405
RegenerationR6	-0.79	6.068	0.00693	0.10176
RegenerationBL	0.459	6.068	0.08551	0.34268
RegenerationTP	-0.288	6.068	0.35071	0.79253

Genes with expression patterns similar to MligTC455_26787

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26787	3192	66.5	Mlig455_044005	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_044005 {REF} {Length: 2813} {TRANSSPLICED} {Dmel: FBgn0039113, CG10217, [RH, Score=300, Expect=2e-93]} {Smed: dd_Smed_v6_2624_0_1, dd_Smed_v6_2624_0_1, [RH, Score=557, Expect=0.0]} {RNA1509_2220, RNA1509_23791, RNA1509_39262, RNA1509_40052, RNA1509_42460, RNA1509_52067} {RNA1310_5876, RNA1509_2220, RNA1509_23791, RNA1509_39262, RNA1509_40052, RNA1509_42460, RNA1509_52067} {RNA1509_2220, RNA1509_23791, RNA1509_39262, RNA1509_40052, RNA1509_42460, RNA1509_52067, RNA815_10235.1}
2.	MligTC455_35064	2048	42.66	Mlig455_035858	Neo: - Age: logFC(26M/2M)=-0.186	MPP6	2.554	-	0.755	-	0.837	0.962	-	Mlig455_035858 {REF} {Length: 2803} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=130.3]; Variant SH3 domain [PF07653.19, score=34.5]; SH3 domain [PF00018.30, score=31.6]; PDZ domain [PF00595.26, score=29.2]; PDZ domain [PF17820.3, score=24.9]; Variant SH3 domain [PF14604.8, score=24.6]; AAA domain [PF13401.8, score=21.4]; AAA ATPase domain [PF13191.8, score=20.0]} {Human: ENSG00000105926, MPP6, membrane palmitoylated protein 6, [RH, Score=338, Expect=1e-109]} {Mouse: ENSMUSG00000038388, Mpp6, membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), [Score=343, Expect=2e-110]; ENSMUSG00000017314, Mpp2, membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2), [Score=341, Expect=3e-109]} {Dmel: FBgn0250785, vari, varicose, [Score=311, Expect=4e-97]} {Celegans: WBGene00002991, lin-2, [Score=285, Expect=2e-87]} {Smed: dd_Smed_v6_5287_0_1, dd_Smed_v6_5287_0_1, [RH, Score=410, Expect=1e-135]} {RNA1509_14924, RNA1509_2984} {RNA1310_5044, RNA1509_14924, RNA1509_2984} {RNA1509_14924, RNA1509_2984, RNA815_1589}
3.	MligTC455_30502	2241	46.69	Mlig455_069268	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.201	CAPN9	1.727	0.768	-	-	-	0.959	-	Mlig455_069268 {REF} {Length: 3008} {Pfam: Calpain family cysteine protease [PF00648.23, score=408.3]; Calpain large subunit, domain III [PF01067.24, score=140.5]; EF hand [PF00036.34, score=40.0]; EF-hand domain [PF13405.8, score=31.3]; EF-hand domain pair [PF13499.8, score=21.0]} {Human: ENSG00000135773, CAPN9, calpain 9, [Score=545, Expect=0.0]; ENSG00000092529, CAPN3, calpain 3, [Score=534, Expect=4e-180]} {Mouse: ENSMUSG00000031981, Capn9, calpain 9, [Score=540, Expect=0.0]; ENSMUSG00000079110, Capn3, calpain 3, [Score=526, Expect=2e-177]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=587, Expect=0.0]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=437, Expect=7e-143]} {Smed: dd_Smed_v6_1971_0_1, dd_Smed_v6_1971_0_1, [RH, Score=766, Expect=0.0]} {RNA1509_16068} {RNA1310_5831.1} {RNA815_2479.1}
4.	MligTC455_22800	5572	116.08	Mlig455_015811	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.383 Regeneration-upregulated BL: 2.246 Regeneration-enriched BL: 2.246		1.715	-	-	-	0.968	0.747	-	Mlig455_015811 {REF} {Length: 1615} {RNA1509_22563} {RNA1310_38452} {RNA815_22086}
5.	MligTC455_29298	448	9.33	Mlig455_054114	Neo: - Age: - Region-enriched R2: 1.919/0.01506		0.978	-	-	-	-	0.978	-	Mlig455_054114 {REF} {Length: 1799} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=39.1]} {Smed: dd_Smed_v6_13661_0_2, dd_Smed_v6_13661_0_2, [Score=171, Expect=3e-51]} {RNA1509_30304} {RNA1310_26220.2} {RNA815_9613}
6.	MligTC455_19037	10	0.21	Mlig455_062313	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_062313 {REF} {Length: 1180} {NoTransDecoderORF} {RNA1509_20257} {RNA1310_115865} {RNA815_5444.1}
7.	MligTC455_22507	46	0.95	Mlig455_029421	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_029421 {REF} {Length: 1886} {RNA1310_25903.1} {RNA815_25103}
8.	MligTC455_44624	5094	106.13	Mlig455_057087	Neo: - Age: logFC(26M/2M)=-0.347	C1orf158	0.95	-	-	-	-	0.950	-	Mlig455_057087 {REF} {Length: 1117} {Human: ENSG00000157330, C1orf158, chromosome 1 open reading frame 158, [RH, Score=92.0, Expect=8e-23]} {Mouse: ENSMUSG00000028589, 1700012P22Rik, RIKEN cDNA 1700012P22 gene, [RH, Score=92.4, Expect=5e-23]} {Smed: dd_Smed_v6_6127_0_1, dd_Smed_v6_6127_0_1, [RH, Score=141, Expect=1e-42]} {RNA1509_23671, RNA1509_5886} {RNA1310_35499.1, RNA1509_23671, RNA1509_5886} {RNA1509_23671, RNA1509_5886, RNA815_44.1}

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