TomoSeq data search

Data search

Results for MligTC455_26931

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26931	30	0.62	Mlig455_026921	Neo: - Age: -	ASIC1	Mlig455_026921 {REF} {Length: 3122} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=210.6]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.1]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=59.3, Expect=2e-08]; ENSG00000108684, ASIC2, acid sensing ion channel subunit 2, [Score=58.2, Expect=3e-08]} {Mouse: ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=59.7, Expect=9e-09]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=63.2, Expect=4e-10]} {Smed: dd_Smed_v6_8949_0_1, dd_Smed_v6_8949_0_1, [Score=113, Expect=5e-26]} {RNA1310_11972} {RNA815_43218}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26931

0.62

Mlig455_026921

Neo: -

Age: -

ASIC1

Mlig455_026921 {REF} {Length: 3122} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=210.6]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.1]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=59.3, Expect=2e-08]; ENSG00000108684, ASIC2, acid sensing ion channel subunit 2, [Score=58.2, Expect=3e-08]} {Mouse: ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=59.7, Expect=9e-09]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=63.2, Expect=4e-10]} {Smed: dd_Smed_v6_8949_0_1, dd_Smed_v6_8949_0_1, [Score=113, Expect=5e-26]} {RNA1310_11972} {RNA815_43218}

Cumulative graph for MligTC455_26931

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.083	1.043	1.00000	1.00000
RegionR2	1.154	1.043	0.46837	0.85409
RegionR3	0.454	1.043	0.63926	1.00000
RegionR4	1.172	1.043	0.49922	0.82606
RegionR5	-1.004	1.043	0.94484	1.00000
RegionR6	0.593	1.043	0.61134	1.00000
RegionR7	2.102	1.043	0.22413	0.84529
RegionR8	-3.389	1.043	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.851	1.043	0.99991	1.00000
RegenerationR2	-1.523	1.043	0.31046	0.75066
RegenerationR3	0.981	1.043	0.44695	0.83056
RegenerationR4	-0.249	1.043	0.92203	1.00000
RegenerationR5	2.837	1.043	0.03254	0.30148
RegenerationR6	1.591	1.043	0.21156	0.55499
RegenerationBL	1.764	1.043	0.44734	0.81441
RegenerationTP	1.686	1.043	0.47723	0.88579

Genes with expression patterns similar to MligTC455_26931

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26931	30	0.62	Mlig455_026921	Neo: - Age: -	ASIC1	3	-	1.000	-	-	1.000	1.000	Mlig455_026921 {REF} {Length: 3122} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=210.6]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.1]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=59.3, Expect=2e-08]; ENSG00000108684, ASIC2, acid sensing ion channel subunit 2, [Score=58.2, Expect=3e-08]} {Mouse: ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=59.7, Expect=9e-09]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=63.2, Expect=4e-10]} {Smed: dd_Smed_v6_8949_0_1, dd_Smed_v6_8949_0_1, [Score=113, Expect=5e-26]} {RNA1310_11972} {RNA815_43218}
2.	MligTC455_08927	5	0.1	Mlig455_047068	Neo: - Age: -		0.993	-	-	-	-	0.993	-	Mlig455_047068 {REF} {Length: 303} {NoTransDecoderORF}
3.	MligTC455_51438	89	1.86	Mlig455_058792, Mlig455_070064	Neo: - Age: Up-Down-Up		0.968	-	-	-	-	0.968	-	Mlig455_058792 {REF} {Length: 986} {RNA1310_35547} {RNA815_27271} Mlig455_070064 {REF} {Length: 955} {RNA1310_35547} {RNA815_27271}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts