M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_27027

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27027 208 4.33 Mlig455_019547

Neo: -

Age: -

 Mlig455_019547 {REF} {Length: 1854} {Pfam: Ets-domain [PF00178.24, score=22.7]} {RNA1509_18842} {RNA1310_17615.1, RNA1509_18842} {RNA1509_18842, RNA815_9132.1}

Cumulative graph for MligTC455_27027

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.77 2.523 0.43757 1.00000
RegionR2 -0.731 2.523 0.45684 0.84433
RegionR3 -0.287 2.523 0.74092 1.00000
RegionR4 1.817 2.523 0.05875 0.21506
RegionR5 0.453 2.523 0.57685 0.93544
RegionR6 -0.49 2.523 0.61316 1.00000
RegionR7 -0.675 2.523 0.58723 1.00000
RegionR8 1.683 2.523 0.09897 0.59136

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.274 2.523 0.52499 1.00000
RegenerationR2 -0.042 2.523 0.95823 1.00000
RegenerationR3 0.543 2.523 0.55800 0.88761
RegenerationR4 -0.067 2.523 0.93139 1.00000
RegenerationR5 0.273 2.523 0.75498 0.97333
RegenerationR6 1.458 2.523 0.15076 0.47589
RegenerationBL 0.554 2.523 0.54997 0.90707
RegenerationTP 1.354 2.523 0.15718 0.58502


Genes with expression patterns similar to MligTC455_27027

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27027 208 4.33 Mlig455_019547

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_019547 {REF} {Length: 1854} {Pfam: Ets-domain [PF00178.24, score=22.7]} {RNA1509_18842} {RNA1310_17615.1, RNA1509_18842} {RNA1509_18842, RNA815_9132.1}
2. MligTC455_27026 3818 79.55 Mlig455_019327, Mlig455_019443

Neo: -

Age: -

 1.923 - - - 0.975 0.948 -

Mlig455_019327 {REF} {Length: 2904} {Pfam: Ets-domain [PF00178.24, score=22.7]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.7]} {RNA1509_14260} {RNA1310_17748.1, RNA1509_14260} {RNA1509_14260, RNA815_9132.1}

Mlig455_019443 {REF} {Length: 1881} {Pfam: Ets-domain [PF00178.24, score=22.1]} {RNA1509_18842} {RNA1310_17615.1} {RNA815_9132.1}
3. MligTC455_47747 1085 22.6 Mlig455_018594

Neo: -

Age: -

Region-enriched R5: 1.797/0.00282

 TMEM243 1.833 - - - - 0.970 0.863 Mlig455_018594 {REF} {Length: 1402} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF2678) [PF10856.10, score=135.3]} {Human: ENSG00000135185, TMEM243, transmembrane protein 243, [RH, Score=125, Expect=3e-38]} {Mouse: ENSMUSG00000079659, Tmem243, transmembrane protein 243, mitochondrial, [RH, Score=111, Expect=9e-33]} {RNA1509_19411, RNA1509_28627, RNA1509_52894, RNA1509_55931, RNA1509_57400} {RNA1310_25206.1, RNA1509_19411, RNA1509_28627, RNA1509_52894, RNA1509_55931, RNA1509_57400} {RNA1509_19411, RNA1509_28627, RNA1509_52894, RNA1509_55931, RNA1509_57400, RNA815_6775.1}
4. MligTC455_37401 592 12.33 Mlig455_056107

Neo: -

Age: logFC(26M/2M)=-0.696

 1.812 - - - - 0.953 0.859 Mlig455_056107 {REF} {Length: 2111} {RNA1509_30010} {RNA1310_55937, RNA1509_30010} {RNA1509_30010, RNA815_28707}
5. MligTC455_37878 9058 188.7 Mlig455_026486

Neo: -

Age: Down-Down-Up

 1.764 - - - - 0.965 0.799 Mlig455_026486 {REF} {Length: 1536} {Pfam: Fic/DOC family [PF02661.20, score=42.5]} {RNA1509_10074} {RNA1310_25617} {RNA815_12719.2}
6. MligTC455_15900 535 11.14 Mlig455_031571

Neo: -

Age: logFC(26M/2M)=0.570

 AK1 1.753 - - - - 0.955 0.798 Mlig455_031571 {REF} {Length: 1336} {Pfam: Adenylate kinase [PF00406.24, score=172.4]; AAA domain [PF13207.8, score=109.5]; AAA domain [PF13671.8, score=31.2]; AAA domain [PF13238.8, score=29.7]; Thymidylate kinase [PF02223.19, score=23.8]} {Human: ENSG00000106992, AK1, adenylate kinase 1, [RH, Score=236, Expect=3e-79]} {Mouse: ENSMUSG00000026817, Ak1, adenylate kinase 1, [RH, Score=241, Expect=1e-81]} {Dmel: FBgn0022709, Adk1, Adenylate kinase 1, [RH, Score=192, Expect=3e-62]} {Celegans: WBGene00009531, F38B2.4, Adenylate kinase isoenzyme 1, [RH, Score=234, Expect=5e-79]} {Smed: dd_Smed_v6_1229_0_2, dd_Smed_v6_1229_0_2, [RH, Score=277, Expect=7e-96]} {RNA1509_45290} {RNA1310_31084} {RNA815_16909}
7. MligTC455_45634 622 12.95 Mlig455_033083, Mlig455_071123

Neo: -

Age: Down-Up-Up

 1.73 0.753 - - - 0.977 -

Mlig455_033083 {REF} {Length: 1318} {Pfam: WSC domain [PF01822.21, score=54.5]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=48.5, Expect=2e-06]} {RNA1509_48972} {RNA1310_28008} {RNA815_14065.1}

Mlig455_071123 {REF} {Length: 1284} {Pfam: WSC domain [PF01822.21, score=48.5]} {RNA1509_48972} {RNA1310_28008, RNA1509_48972} {RNA1509_48972, RNA815_14065.1}
8. MligTC455_51159 49 1.03 Mlig455_068260

Neo: -

Age: -

 SSPO 1.724 0.758 - - - 0.966 - Mlig455_068260 {REF} {Length: 3064} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=45.9]; C8 domain [PF08742.13, score=40.0]; von Willebrand factor type D domain [PF00094.27, score=26.1]} {Human: ENSG00000197558, SSPO, SCO-spondin, [Score=125, Expect=4e-29]} {Mouse: ENSMUSG00000029797, Sspo, SCO-spondin, [Score=115, Expect=6e-26]} {Dmel: FBgn0029167, Hml, Hemolectin, [Score=87.4, Expect=2e-17]} {Celegans: WBGene00003072, lrp-2, Low-density lipoprotein RecePtor related, [Score=61.6, Expect=2e-09]} {Smed: dd_Smed_v6_9342_0_1, dd_Smed_v6_9342_0_1, [Score=141, Expect=8e-35]} {RNA1509_32065} {RNA1310_11674.1} {RNA815_35239}
9. MligTC455_51672 157 3.26 Mlig455_014666

Neo: -

Age: -

Region-enriched R8: 5.800/0.00000
Region-enriched R7: 3.562/0.00419

 MEP1B 1.706 0.756 - - - 0.950 - Mlig455_014666 {REF} {Length: 1216} {Pfam: Astacin (Peptidase family M12A) [PF01400.26, score=143.8]} {Human: ENSG00000141434, MEP1B, meprin A subunit beta, [Score=103, Expect=4e-24]} {Mouse: ENSMUSG00000024313, Mep1b, meprin 1 beta, [Score=107, Expect=2e-25]} {Dmel: FBgn0028950, CG15255, [Score=111, Expect=1e-28]} {Celegans: WBGene00003534, nas-15, Zinc metalloproteinase nas-15, [RH, Score=122, Expect=4e-31]} {Smed: dd_Smed_v6_85_0_1, dd_Smed_v6_85_0_1, [Score=120, Expect=2e-32]} {RNA1310_41083} {RNA815_28844}
10. MligTC455_16220 109 2.26 Mlig455_033861

Neo: -

Age: -

 1.677 - - - - 0.962 0.715 Mlig455_033861 {REF} {Length: 1348} {RNA1509_56316} {RNA1310_29964} {RNA815_15923}
11. MligTC455_22572 299 6.24 Mlig455_006773

Neo: -

Age: logFC(26M/2M)=-0.423

Region-enriched R7: 2.258/0.00949

 TRPM3 1.667 - - - - 0.957 0.710 Mlig455_006773 {REF} {Length: 6013} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=78.5]; Ankyrin repeats (3 copies) [PF12796.9, score=73.4]; Ankyrin repeat [PF13606.8, score=51.5]; Ankyrin repeat [PF00023.32, score=48.2]; Ankyrin repeats (many copies) [PF13857.8, score=29.4]; Ion transport protein [PF00520.33, score=24.0]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=74.3, Expect=9e-13]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=74.3, Expect=6e-13]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=94.4, Expect=2e-19]} {RNA1509_13443} {RNA1310_23388} {RNA815_3717.1}
12. MligTC455_23338 206 4.29 Mlig455_033045, Mlig455_053128

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.721

 NEFH 1.662 - 0.711 - - - 0.951

Mlig455_033045 {REF} {Length: 9317} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=111, Expect=1e-24]} {Dmel: FBgn0029807, CG3108, [Score=53.1, Expect=8e-07]} {RNA1509_6333} {RNA1310_785} {RNA815_2080}

Mlig455_053128 {REF} {Length: 16958} {Human: ENSG00000100285, NEFH, neurofilament heavy, [Score=51.6, Expect=5e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=114, Expect=1e-25]} {Dmel: FBgn0029807, CG3108, [Score=52.4, Expect=1e-06]} {RNA1509_28919, RNA1509_6333} {RNA1310_785, RNA1509_28919} {RNA1509_28919, RNA815_2080}
13. MligTC455_31518 19118 398.29 Mlig455_053864, Mlig455_053878

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=2.053

Region-enriched R8: 7.674/0.00000
Region-enriched R7: 4.838/0.00008

 PI16 1.659 0.709 - - - 0.950 -

Mlig455_053864 {REF} {Length: 1794} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=56.1]; Kringle domain [PF00051.20, score=52.3]} {Human: ENSG00000164530, PI16, peptidase inhibitor 16, [Score=100, Expect=1e-22]} {Mouse: ENSMUSG00000024011, Pi16, peptidase inhibitor 16, [Score=99.0, Expect=3e-22]} {Dmel: FBgn0038126, CG8483, [Score=102, Expect=1e-23]} {Celegans: WBGene00011724, scl-18, SCP-Like extracellular protein, [RH, Score=73.2, Expect=1e-14]} {Smed: dd_Smed_v6_924_0_1, dd_Smed_v6_924_0_1, [RH, Score=128, Expect=3e-35]} {RNA1509_603} {RNA1310_25676} {RNA815_7928}

Mlig455_053878 {REF} {Length: 1368} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=56.1]; Kringle domain [PF00051.20, score=52.3]} {Human: ENSG00000164530, PI16, peptidase inhibitor 16, [Score=100, Expect=1e-22]} {Mouse: ENSMUSG00000024011, Pi16, peptidase inhibitor 16, [Score=99.0, Expect=3e-22]} {Dmel: FBgn0038126, CG8483, [Score=102, Expect=1e-23]} {Celegans: WBGene00011724, scl-18, SCP-Like extracellular protein, [RH, Score=73.2, Expect=1e-14]} {Smed: dd_Smed_v6_924_0_1, dd_Smed_v6_924_0_1, [RH, Score=128, Expect=3e-35]} {RNA1509_603} {RNA1310_25676} {RNA815_7928}
14. MligTC455_37138 34 0.71 Mlig455_032431, Mlig455_061143

Neo: -

Age: -

 0.974 - - - - 0.974 -

Mlig455_032431 {REF} {Length: 122} {NoTransDecoderORF} {RNA1310_117531}

Mlig455_061143 {REF} {Length: 73} {NoTransDecoderORF} {RNA1310_37603}
15. MligTC455_17249 1391 28.97 Mlig455_021343

Neo: -

Age: Down-Up-Up

Region-enriched R3: 1.390/0.03324

 FAU 0.97 - - - - 0.970 - Mlig455_021343 {REF} {Length: 1056} {Pfam: Ribosomal protein S30 [PF04758.16, score=43.3]} {Human: ENSG00000149806, FAU, FAU, ubiquitin like and ribosomal protein S30 fusion, [Score=44.3, Expect=5e-06]} {Mouse: ENSMUSG00000038274, Fau, Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), [Score=43.5, Expect=1e-05]} {Dmel: FBgn0038834, RpS30, Ribosomal protein S30, [Score=45.1, Expect=2e-06]} {Smed: dd_Smed_v6_126_0_1, dd_Smed_v6_126_0_1, [Score=48.9, Expect=9e-08]} {RNA1509_10703} {RNA1310_1545.1, RNA1509_10703} {RNA1509_10703, RNA815_16439}
16. MligTC455_16322 88 1.84 Mlig455_029053

Neo: -

Age: Down-Down-Up

 0.967 - - - - 0.967 - Mlig455_029053 {REF} {Length: 1294} {RNA1509_10778} {RNA1310_25418} {RNA815_18805}
17. MligTC455_45690 2497 52.02 Mlig455_051204

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.586

Region-enriched R7: 1.072/0.04886

 0.966 - - - - 0.966 - Mlig455_051204 {REF} {Length: 1686} {RNA1509_29397} {RNA1310_21586, RNA1509_29397} {RNA1509_29397, RNA815_10734.1}
18. MligTC455_20385 320 6.67 Mlig455_026192

Neo: -

Age: -

Region-enriched R8: 3.215/0.01738
Region-enriched R7: 2.779/0.00840

 0.963 - - - - 0.963 - Mlig455_026192 {REF} {Length: 6207} {Smed: dd_Smed_v6_14319_0_1, dd_Smed_v6_14319_0_1, [RH, Score=79.0, Expect=1e-16]} {RNA1509_51615} {RNA1310_6888, RNA1509_51615} {RNA1509_51615, RNA815_13531.1}
19. MligTC455_11469 135 2.82 Mlig455_035767

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.383

Region-enriched R7: 6.061/0.00000

Regeneration-enriched R3: 6.059
Regeneration-enriched R4: 5.976

 0.961 - - - - 0.961 - Mlig455_035767 {REF} {Length: 694} {RNA1509_15474} {RNA1310_93354} {RNA815_37400.2}
20. MligTC455_30265 720 14.99 Mlig455_014549, Mlig455_036942

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.640

 0.959 - - - - 0.959 -

Mlig455_014549 {REF} {Length: 1343} {RNA1509_45000} {RNA1310_32524} {RNA815_26384}

Mlig455_036942 {REF} {Length: 1343} {RNA1509_45000} {RNA1310_32524} {RNA815_26384}
21. MligTC455_42524 865 18.03 Mlig455_001409, Mlig455_064268

Neo: -

Age: -

 0.959 - - - - 0.959 -

Mlig455_001409 {REF} {Length: 977} {Smed: dd_Smed_v6_391_0_1, dd_Smed_v6_391_0_1, [RH, Score=76.6, Expect=3e-20]} {RNA1509_31794} {RNA1310_45655, RNA1509_31794} {RNA1509_31794, RNA815_25121.1}

Mlig455_064268 {REF} {Length: 1019} {Smed: dd_Smed_v6_391_0_1, dd_Smed_v6_391_0_1, [RH, Score=76.6, Expect=3e-20]} {RNA1509_31794} {RNA1310_45655} {RNA815_25121.1}
22. MligTC455_08679 21 0.44 Mlig455_013256

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_013256 {REF} {Length: 356} {NoTransDecoderORF} {RNA1310_123613} {RNA815_61270}
23. MligTC455_09590 66 1.38 Mlig455_013404

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_013404 {REF} {Length: 535} {NoTransDecoderORF} {RNA1509_20243} {RNA1310_62451.2} {RNA815_1415.1}
24. MligTC455_09930 62 1.28 Mlig455_007950, Mlig455_008051

Neo: -

Age: -

 0.957 - - - - 0.957 -

Mlig455_007950 {REF} {Length: 561} {NoTransDecoderORF} {RNA1310_28876.2} {RNA815_33150}

Mlig455_008051 {REF} {Length: 1404} {RNA1509_11045} {RNA1310_28876.2} {RNA815_37437}
25. MligTC455_17818 453 9.44 Mlig455_005309

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.498

 GUCA1B 0.957 - - - - 0.957 - Mlig455_005309 {REF} {Length: 953} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=75.0]; EF hand [PF00036.34, score=72.8]; EF-hand domain [PF13405.8, score=61.9]; EF hand [PF13202.8, score=61.2]; EF-hand domain pair [PF13833.8, score=47.4]} {Human: ENSG00000112599, GUCA1B, guanylate cyclase activator 1B, [Score=63.9, Expect=2e-12]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=52.0, Expect=7e-09]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=52.0, Expect=2e-08]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=52.0, Expect=2e-08]; ENSMUSG00000033953, Ppp3r1, protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I), [Score=50.1, Expect=1e-07]; ENSMUSG00000028310, Ppp3r2, protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II), [Score=50.1, Expect=1e-07]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=50.4, Expect=4e-08]} {Celegans: WBGene00003565, ncs-3, Neuronal Calcium Sensor family, [Score=67.4, Expect=4e-14]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=50.4, Expect=3e-08]} {RNA1509_25226} {RNA1310_34058, RNA1509_25226} {RNA1509_25226, RNA815_15719}
26. MligTC455_20389 14 0.28 Mlig455_026727

Neo: -

Age: Down-Up-Down

 SLC1A2 0.957 - - - - 0.957 - Mlig455_026727 {REF} {Length: 3573} {Pfam: Sodium:dicarboxylate symporter family [PF00375.20, score=432.3]} {Human: ENSG00000110436, SLC1A2, solute carrier family 1 member 2, [RH, Score=530, Expect=0.0]} {Mouse: ENSMUSG00000005089, Slc1a2, solute carrier family 1 (glial high affinity glutamate transporter), member 2, [RH, Score=545, Expect=0.0]} {Dmel: FBgn0026439, Eaat1, Excitatory amino acid transporter 1, [RH, Score=374, Expect=1e-123]} {Celegans: WBGene00001620, glt-1, Excitatory amino acid transporter, [RH, Score=517, Expect=2e-179]} {Smed: dd_Smed_v6_7570_0_1, dd_Smed_v6_7570_0_1, [RH, Score=609, Expect=0.0]} {RNA1509_31315} {RNA1310_5180} {RNA815_22365}
27. MligTC455_51997 87 1.82 Mlig455_065123, Mlig455_065132

Neo: -

Age: -

Region-enriched R2: 7.027/0.00007
Region-enriched R8: 5.585/0.01192
Region-enriched R7: 4.059/0.04032

 PTPRK 0.957 - - - - 0.957 -

Mlig455_065123 {REF} {Length: 5463} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=353.0]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=21.2]} {Human: ENSG00000152894, PTPRK, protein tyrosine phosphatase, receptor type K, [Score=259, Expect=2e-73]; ENSG00000273993, PTPRK, protein tyrosine phosphatase, receptor type K, [Score=259, Expect=2e-73]; ENSG00000173482, PTPRM, protein tyrosine phosphatase, receptor type M, [Score=251, Expect=2e-70]} {Mouse: ENSMUSG00000019889, Ptprk, protein tyrosine phosphatase, receptor type, K, [Score=254, Expect=1e-71]; ENSMUSG00000033278, Ptprm, protein tyrosine phosphatase, receptor type, M, [Score=251, Expect=1e-70]; ENSMUSG00000053141, Ptprt, protein tyrosine phosphatase, receptor type, T, [Score=243, Expect=4e-68]; ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [Score=242, Expect=1e-67]} {Dmel: FBgn0267486, Ptp36E, Protein tyrosine phosphatase 36E, [Score=327, Expect=2e-102]} {Celegans: WBGene00011755, T13H5.1, Protein-tyrosine-phosphatase, [RH, Score=291, Expect=4e-87]} {Smed: dd_Smed_v6_13723_0_1, dd_Smed_v6_13723_0_1, [Score=274, Expect=6e-82]} {RNA1509_46483} {RNA1310_8984.3} {RNA815_24366}

Mlig455_065132 {REF} {Length: 3421} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=357.1]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=21.7]} {Human: ENSG00000152894, PTPRK, protein tyrosine phosphatase, receptor type K, [Score=270, Expect=2e-76]; ENSG00000273993, PTPRK, protein tyrosine phosphatase, receptor type K, [Score=270, Expect=2e-76]; ENSG00000173482, PTPRM, protein tyrosine phosphatase, receptor type M, [Score=261, Expect=4e-73]; ENSG00000153707, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=259, Expect=2e-72]; ENSG00000142949, PTPRF, protein tyrosine phosphatase, receptor type F, [Score=259, Expect=1e-72]; ENSG00000282932, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=259, Expect=2e-72]; ENSG00000105426, PTPRS, protein tyrosine phosphatase, receptor type S, [Score=257, Expect=9e-72]} {Mouse: ENSMUSG00000019889, Ptprk, protein tyrosine phosphatase, receptor type, K, [Score=264, Expect=2e-74]; ENSMUSG00000033278, Ptprm, protein tyrosine phosphatase, receptor type, M, [Score=262, Expect=7e-74]; ENSMUSG00000033295, Ptprf, protein tyrosine phosphatase, receptor type, F, [Score=261, Expect=3e-73]; ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [Score=261, Expect=1e-73]; ENSMUSG00000013236, Ptprs, protein tyrosine phosphatase, receptor type, S, [Score=258, Expect=2e-72]} {Dmel: FBgn0267486, Ptp36E, Protein tyrosine phosphatase 36E, [RH, Score=343, Expect=1e-107]} {Celegans: WBGene00011755, T13H5.1, Protein-tyrosine-phosphatase, [RH, Score=297, Expect=4e-89]} {Smed: dd_Smed_v6_13723_0_1, dd_Smed_v6_13723_0_1, [RH, Score=287, Expect=4e-86]} {RNA1509_46483} {RNA1310_8984.1, RNA1509_46483} {RNA1509_46483, RNA815_22134.1}
28. MligTC455_47348 2699 56.22 Mlig455_014227

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.429

Region-specific R8: 6.506

Region-enriched R8: 5.811/0.00000
Region-enriched R7: 3.945/0.00000

 0.956 - - - - 0.956 - Mlig455_014227 {REF} {Length: 1491} {RNA1509_14722, RNA1509_30918} {RNA1310_65420, RNA1509_14722, RNA1509_30918} {RNA1509_14722, RNA1509_30918, RNA815_35136}
29. MligTC455_11108 594 12.38 Mlig455_011501

Neo: -

Age: Down-Down-Down

Region-enriched R6: 6.991/0.00992

 0.955 - - - - 0.955 - Mlig455_011501 {REF} {Length: 841} {TRANSSPLICED} {RNA1509_54224} {RNA1310_45118} {RNA815_63517}
30. MligTC455_36821 1027 21.4 Mlig455_008957

Neo: -

Age: -

Region-specific R7: 5.443

Region-enriched R7: 4.993/0.00000
Region-enriched R8: 3.075/0.00000
Region-enriched R6: 2.143/0.00003

 0.955 - - - - 0.955 - Mlig455_008957 {REF} {Length: 1684} {Pfam: Protein of unknown function (DUF3421) [PF11901.10, score=129.1]} {Dmel: FBgn0034583, CG10527, [Score=101, Expect=3e-26]} {Smed: dd_Smed_v6_1040_0_1, dd_Smed_v6_1040_0_1, [RH, Score=148, Expect=3e-46]} {RNA1509_38235} {RNA1310_26456.1} {RNA815_25480}
31. MligTC455_08906 71 1.47 Mlig455_013161

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_013161 {REF} {Length: 694}
32. MligTC455_07459 99 2.06 Mlig455_006481

Neo: -

Age: -

Region-enriched R7: 5.737/0.00000
Region-enriched R8: 4.396/0.00673
Region-enriched R6: 2.873/0.00432

 0.953 - - - - 0.953 - Mlig455_006481 {REF} {Length: 920} {NoTransDecoderORF} {RNA1310_80600} {RNA815_38048.2}
33. MligTC455_48650 8593 179.02 Mlig455_043924

Neo: -

Age: logFC(26M/2M)=-0.454

Region-enriched R8: 6.377/0.00000
Region-enriched R7: 4.736/0.00000

 0.953 - - - - 0.953 - Mlig455_043924 {REF} {Length: 1776} {RNA1509_3829} {RNA1310_39915.1, RNA1509_3829} {RNA1509_3829, RNA815_21876}
34. MligTC455_49430 1362 28.38 Mlig455_041374

Neo: -

Age: -

Region-enriched R5: 1.493/0.04187

Regeneration-upregulated TP: 2.859

Regeneration-enriched TP: 2.859

 0.953 - - - - 0.953 - Mlig455_041374 {REF} {Length: 1691} {Pfam: Basic region leucine zipper [PF07716.17, score=36.8]; Lactate racemase N-terminal domain [PF09861.11, score=18.5]} {RNA1509_8902} {RNA1310_20886, RNA1509_8902} {RNA1509_8902, RNA815_8401}
35. MligTC455_40916 649 13.52 Mlig455_042401, Mlig455_042481

Neo: -

Age: -

Region-enriched R7: 7.363/0.00000
Region-enriched R8: 6.345/0.00003

 SCUBE1 0.952 - - - - 0.952 -

Mlig455_042401 {REF} {Length: 1371} {Pfam: Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=102.6]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=55.3]; TNFR/NGFR cysteine-rich region [PF00020.20, score=25.8]} {Human: ENSG00000159307, SCUBE1, signal peptide, CUB domain and EGF like domain containing 1, [Score=60.8, Expect=3e-09]; ENSG00000146197, SCUBE3, signal peptide, CUB domain and EGF like domain containing 3, [Score=60.5, Expect=3e-09]} {Mouse: ENSMUSG00000109446, Gm9195, predicted gene 9195, [Score=65.5, Expect=7e-11]; ENSMUSG00000016763, Scube1, signal peptide, CUB domain, EGF-like 1, [Score=65.1, Expect=6e-11]} {Dmel: FBgn0031879, uif, uninflatable, [Score=65.5, Expect=5e-11]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=57.4, Expect=1e-08]} {Smed: dd_Smed_v6_3432_0_1, dd_Smed_v6_3432_0_1, [Score=85.5, Expect=1e-18]} {RNA1509_1196} {RNA1310_43526} {RNA815_8281.1}

Mlig455_042481 {REF} {Length: 1419} {Pfam: Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=99.7]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=53.9]; TNFR/NGFR cysteine-rich region [PF00020.20, score=22.7]; Giardia variant-specific surface protein [PF03302.15, score=20.0]} {Human: ENSG00000159307, SCUBE1, signal peptide, CUB domain and EGF like domain containing 1, [Score=59.7, Expect=5e-09]; ENSG00000146197, SCUBE3, signal peptide, CUB domain and EGF like domain containing 3, [Score=59.3, Expect=6e-09]} {Mouse: ENSMUSG00000016763, Scube1, signal peptide, CUB domain, EGF-like 1, [Score=64.3, Expect=1e-10]; ENSMUSG00000109446, Gm9195, predicted gene 9195, [Score=62.0, Expect=7e-10]; ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=62.0, Expect=7e-10]} {Dmel: FBgn0031879, uif, uninflatable, [Score=68.6, Expect=4e-12]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=56.6, Expect=2e-08]} {Smed: dd_Smed_v6_3432_0_1, dd_Smed_v6_3432_0_1, [Score=85.1, Expect=2e-18]} {RNA1509_376} {RNA1310_43526} {RNA815_8281.1}
36. MligTC455_19634 4365 90.93 Mlig455_056587

Neo: -

Age: -

Region-enriched R8: 2.446/0.00244
Region-enriched R7: 1.888/0.03992

 0.951 - - - - 0.951 - Mlig455_056587 {REF} {Length: 341} {NoTransDecoderORF} {RNA1509_7730} {RNA1310_32308} {RNA815_5913.3}
37. MligTC455_27122 1937 40.35 Mlig455_036943

Neo: -

Age: logFC(26M/2M)=-0.328

 0.951 - - - - 0.951 - Mlig455_036943 {REF} {Length: 2654} {RNA1509_51779, RNA1509_58276} {RNA1310_29995.1, RNA1509_51779} {RNA1509_51779, RNA815_9865}
38. MligTC455_27299 1310 27.3 Mlig455_030624

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_030624 {REF} {Length: 1599} {Smed: dd_Smed_v6_5420_0_1, dd_Smed_v6_5420_0_1, [RH, Score=175, Expect=9e-55]} {RNA1509_6286} {RNA1310_20686, RNA1509_6286} {RNA1509_6286, RNA815_9356.1}
39. MligTC455_28287 44 0.92 Mlig455_008619

Neo: -

Age: Down-Down-Up

 0.951 - - - - 0.951 - Mlig455_008619 {REF} {Length: 3624} {RNA1509_41463} {RNA1310_17510.1} {RNA815_6737}
40. MligTC455_33569 50 1.05 Mlig455_011393

Neo: -

Age: -

Region-enriched R3: 3.123/0.04141

 0.951 - - - - 0.951 - Mlig455_011393 {REF} {Length: 1811} {RNA1509_38108} {RNA1310_23033.1, RNA1509_38108} {RNA1509_38108, RNA815_15683.1}
41. MligTC455_42610 135 2.81 Mlig455_041375

Neo: -

Age: Up-Down-Down

 0.951 - - - - 0.951 - Mlig455_041375 {REF} {Length: 3243} {NoTransDecoderORF} {RNA1509_51543, RNA1509_8902} {RNA1310_20886, RNA1509_51543} {RNA1509_51543, RNA815_8401}
42. MligTC455_44098 944 19.67 Mlig455_012843

Neo: -

Age: Down-Down-Up

 GCH1 0.951 - - - - 0.951 - Mlig455_012843 {REF} {Length: 1400} {Pfam: GTP cyclohydrolase I [PF01227.24, score=246.6]; QueF-like protein [PF14489.8, score=18.8]} {Human: ENSG00000131979, GCH1, GTP cyclohydrolase 1, [RH, Score=307, Expect=2e-106]} {Mouse: ENSMUSG00000037580, Gch1, GTP cyclohydrolase 1, [RH, Score=302, Expect=2e-104]} {Dmel: FBgn0003162, Pu, Punch, [RH, Score=291, Expect=5e-100]} {Celegans: WBGene00000298, cat-4, GTP cyclohydrolase 1, [RH, Score=300, Expect=5e-104]} {Smed: dd_Smed_v6_11172_0_1, dd_Smed_v6_11172_0_1, [RH, Score=296, Expect=8e-103]} {RNA1509_50079} {RNA1310_26106.1} {RNA815_21206}
43. MligTC455_27300 1249 26.01 Mlig455_030696

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_030696 {REF} {Length: 1014} {Smed: dd_Smed_v6_5420_0_1, dd_Smed_v6_5420_0_1, [RH, Score=175, Expect=9e-55]} {RNA1509_6286} {RNA1310_20686} {RNA815_9356.1}
44. MligTC455_36432 66 1.38 Mlig455_041004

Neo: -

Age: Up-Up-Down

 0.95 - - - - 0.950 - Mlig455_041004 {REF} {Length: 1286} {RNA1509_20249} {RNA1310_52255} {RNA815_8663}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA