TomoSeq data search

Data search

Results for MligTC455_27117

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27117	118	2.45	Mlig455_034266	Neo: - Age: Up-Down-Down		Mlig455_034266 {REF} {Length: 2439} {Pfam: Ring finger domain [PF13639.8, score=20.8]; RING-type zinc-finger [PF13445.8, score=20.0]} {RNA1509_4535} {RNA1310_1489} {RNA815_1870.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_27117

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.988	1.861	0.31452	0.96394
RegionR2	1.621	1.861	0.14165	0.46833
RegionR3	1.011	1.861	0.16039	0.67826
RegionR4	-1.838	1.861	0.05946	0.21677
RegionR5	-0.268	1.861	0.72010	1.00000
RegionR6	0.949	1.861	0.22966	0.81315
RegionR7	-1.94	1.861	0.22641	0.84717
RegionR8	2.452	1.861	0.01675	0.25215

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.186	1.861	0.81581	1.00000
RegenerationR2	1.546	1.861	0.08769	0.47518
RegenerationR3	0.454	1.861	0.63135	0.92074
RegenerationR4	0.803	1.861	0.43395	0.83288
RegenerationR5	1.342	1.861	0.12061	0.51989
RegenerationR6	1.79	1.861	0.05529	0.29496
RegenerationBL	-1.171	1.861	0.60364	0.95001
RegenerationTP	1.456	1.861	0.31454	0.75956

Genes with expression patterns similar to MligTC455_27117

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27117	118	2.45	Mlig455_034266	Neo: - Age: Up-Down-Down		5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_034266 {REF} {Length: 2439} {Pfam: Ring finger domain [PF13639.8, score=20.8]; RING-type zinc-finger [PF13445.8, score=20.0]} {RNA1509_4535} {RNA1310_1489} {RNA815_1870.1}
2.	MligTC455_27116	115	2.4	Mlig455_034267	Neo: - Age: -		3.877	0.997	0.993	-	0.895	-	0.992	Mlig455_034267 {REF} {Length: 2201} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=23.5]} {RNA1509_48492} {RNA1310_6803.1} {RNA815_2603.2}
3.	MligTC455_37208	1266	26.37	Mlig455_053808, Mlig455_068536	Neo: - Age: -	AMOTL1	1.754	-	-	-	0.795	0.959	-	Mlig455_053808 {REF} {Length: 2762} {TRANSSPLICED} {Human: ENSG00000166025, AMOTL1, angiomotin like 1, [RH, Score=52.0, Expect=2e-06]} {Mouse: ENSMUSG00000041688, Amot, angiomotin, [RH, Score=57.4, Expect=2e-08]} {RNA1509_13880} {RNA1310_9641} {RNA815_16509} Mlig455_068536 {REF} {Length: 2729} {TRANSSPLICED} {Human: ENSG00000166025, AMOTL1, angiomotin like 1, [RH, Score=52.0, Expect=2e-06]} {Mouse: ENSMUSG00000041688, Amot, angiomotin, [RH, Score=57.4, Expect=2e-08]} {RNA1509_13880} {RNA1310_9641, RNA1509_13880} {RNA1509_13880, RNA815_16509}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_27117

118

2.45

Mlig455_034266

Neo: -

Age: Up-Down-Down

1.000

Mlig455_034266 {REF} {Length: 2439} {Pfam: Ring finger domain [PF13639.8, score=20.8]; RING-type zinc-finger [PF13445.8, score=20.0]} {RNA1509_4535} {RNA1310_1489} {RNA815_1870.1}

MligTC455_27116

115

2.4

Mlig455_034267

Neo: -

Age: -

3.877

0.997

0.993

0.895

0.992

Mlig455_034267 {REF} {Length: 2201} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=23.5]} {RNA1509_48492} {RNA1310_6803.1} {RNA815_2603.2}

MligTC455_37208

1266

26.37

Mlig455_053808, Mlig455_068536

Neo: -

Age: -

AMOTL1

1.754

0.795

0.959

Mlig455_053808 {REF} {Length: 2762} {TRANSSPLICED} {Human: ENSG00000166025, AMOTL1, angiomotin like 1, [RH, Score=52.0, Expect=2e-06]} {Mouse: ENSMUSG00000041688, Amot, angiomotin, [RH, Score=57.4, Expect=2e-08]} {RNA1509_13880} {RNA1310_9641} {RNA815_16509}

Mlig455_068536 {REF} {Length: 2729} {TRANSSPLICED} {Human: ENSG00000166025, AMOTL1, angiomotin like 1, [RH, Score=52.0, Expect=2e-06]} {Mouse: ENSMUSG00000041688, Amot, angiomotin, [RH, Score=57.4, Expect=2e-08]} {RNA1509_13880} {RNA1310_9641, RNA1509_13880} {RNA1509_13880, RNA815_16509}