TomoSeq data search

Data search

Results for MligTC455_27178

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27178

514

10.72

Mlig455_005411

Neo: -

Age: Down-Down-Up

Mlig455_005411 {REF} {Length: 359} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}

Cumulative graph for MligTC455_27178

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.712	3.809	0.69269	1.00000
RegionR2	-0.316	3.809	0.61518	0.96157
RegionR3	0.251	3.809	0.62477	1.00000
RegionR4	0.61	3.809	0.30005	0.61275
RegionR5	0.958	3.809	0.03197	0.13588
RegionR6	-0.196	3.809	0.72490	1.00000
RegionR7	-0.734	3.809	0.35121	0.98724
RegionR8	0.137	3.809	0.87505	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.919	3.809	0.74063	1.00000
RegenerationR2	-0.53	3.809	0.29474	0.73700
RegenerationR3	-0.021	3.809	0.96515	1.00000
RegenerationR4	0.304	3.809	0.56931	0.90101
RegenerationR5	-0.105	3.809	0.82112	0.99464
RegenerationR6	0.691	3.809	0.20864	0.55166
RegenerationBL	0.426	3.809	0.52230	0.88335
RegenerationTP	0.884	3.809	0.20690	0.64873

Genes with expression patterns similar to MligTC455_27178

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27178	514	10.72	Mlig455_005411	Neo: - Age: Down-Down-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005411 {REF} {Length: 359} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}
2.	MligTC455_51827	2868	59.75	Mlig455_017594, Mlig455_058811	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.028/0.00020	POLR1C	2.599	0.738	-	-	0.887	0.974	-	Mlig455_017594 {REF} {Length: 4616} {Pfam: RNA polymerase Rpb3/Rpb11 dimerisation domain [PF01193.26, score=74.9]; RNA polymerase Rpb3/RpoA insert domain [PF01000.28, score=44.7]} {Human: ENSG00000171453, POLR1C, RNA polymerase I and III subunit C, [Score=213, Expect=2e-66]} {Mouse: ENSMUSG00000067148, Polr1c, polymerase (RNA) I polypeptide C, [Score=204, Expect=4e-63]} {Dmel: FBgn0031657, CG3756, [Score=197, Expect=8e-61]} {Celegans: WBGene00019275, rpac-40, RNA Polymerase I/III (A/C) shared subunit, [Score=210, Expect=1e-65]} {Smed: dd_Smed_v6_5608_0_5, dd_Smed_v6_5608_0_5, [Score=98.6, Expect=6e-23]} {RNA1509_8571} {RNA1310_29398} {RNA815_14725} Mlig455_058811 {REF} {Length: 1089} {TRANSSPLICED} {Pfam: RNA polymerase Rpb3/Rpb11 dimerisation domain [PF01193.26, score=75.0]; RNA polymerase Rpb3/RpoA insert domain [PF01000.28, score=71.6]} {Human: ENSG00000171453, POLR1C, RNA polymerase I and III subunit C, [RH, Score=257, Expect=1e-83]} {Mouse: ENSMUSG00000067148, Polr1c, polymerase (RNA) I polypeptide C, [RH, Score=248, Expect=2e-80]} {Dmel: FBgn0031657, CG3756, [RH, Score=238, Expect=1e-76]} {Celegans: WBGene00019275, rpac-40, RNA Polymerase I/III (A/C) shared subunit, [RH, Score=250, Expect=3e-81]} {Smed: dd_Smed_v6_5608_0_1, dd_Smed_v6_5608_0_1, [RH, Score=132, Expect=5e-35]} {RNA1509_8571} {RNA1310_29398, RNA1509_8571} {RNA1509_8571, RNA815_14725}
3.	MligTC455_26485	1568	32.66	Mlig455_002056, Mlig455_060890	Neo: - Age: -	ABCB7	1.765	-	-	0.794	0.971	-	-	Mlig455_002056 {REF} {Length: 3265} {TRANSSPLICED} {Pfam: ABC transporter transmembrane region [PF00664.25, score=106.7]} {Human: ENSG00000131269, ABCB7, ATP binding cassette subfamily B member 7, [Score=375, Expect=5e-121]} {Mouse: ENSMUSG00000031333, Abcb7, ATP-binding cassette, sub-family B (MDR/TAP), member 7, [Score=369, Expect=9e-118]} {Dmel: FBgn0035244, ABCB7, ATP binding cassette subfamily B member 7, [Score=355, Expect=9e-113]} {Celegans: WBGene00022281, abtm-1, ABC Transporter, Mitochondrial, [Score=345, Expect=3e-109]} {Smed: dd_Smed_v6_6005_0_1, dd_Smed_v6_6005_0_1, [Score=358, Expect=4e-115]} {RNA1509_5332} {RNA1310_8149.1} {RNA815_3013} Mlig455_060890 {REF} {Length: 3295} {Pfam: ABC transporter transmembrane region [PF00664.25, score=115.3]; ABC transporter [PF00005.29, score=114.8]; RecF/RecN/SMC N terminal domain [PF02463.21, score=31.8]} {Human: ENSG00000131269, ABCB7, ATP binding cassette subfamily B member 7, [RH, Score=748, Expect=0.0]} {Mouse: ENSMUSG00000031333, Abcb7, ATP-binding cassette, sub-family B (MDR/TAP), member 7, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0035244, ABCB7, ATP binding cassette subfamily B member 7, [RH, Score=713, Expect=0.0]} {Celegans: WBGene00022281, abtm-1, ABC Transporter, Mitochondrial, [RH, Score=709, Expect=0.0]} {Smed: dd_Smed_v6_6005_0_2, dd_Smed_v6_6005_0_2, [RH, Score=735, Expect=0.0]} {RNA1509_5332, RNA1509_56336} {RNA1310_8149.1, RNA1509_5332, RNA1509_56336} {RNA1509_5332, RNA1509_56336, RNA815_3013}
4.	MligTC455_26484	740	15.42	Mlig455_001957	Neo: - Age: -	ABCB7	1.726	-	-	0.758	0.968	-	-	Mlig455_001957 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=113.5]; ABC transporter transmembrane region [PF00664.25, score=112.2]; RecF/RecN/SMC N terminal domain [PF02463.21, score=30.7]} {Human: ENSG00000131269, ABCB7, ATP binding cassette subfamily B member 7, [RH, Score=747, Expect=0.0]} {Mouse: ENSMUSG00000031333, Abcb7, ATP-binding cassette, sub-family B (MDR/TAP), member 7, [RH, Score=737, Expect=0.0]} {Dmel: FBgn0035244, ABCB7, ATP binding cassette subfamily B member 7, [RH, Score=715, Expect=0.0]} {Celegans: WBGene00022281, abtm-1, ABC Transporter, Mitochondrial, [RH, Score=702, Expect=0.0]} {Smed: dd_Smed_v6_6005_0_2, dd_Smed_v6_6005_0_2, [RH, Score=735, Expect=0.0]} {RNA1509_5332} {RNA1310_8149.1} {RNA815_3013}
5.	MligTC455_44893	215	4.47	Mlig455_020672	Neo: Irradiation Age: -	SMARCC2	1.676	-	-	-	0.950	0.726	-	Mlig455_020672 {REF} {Length: 2246} {TRANSSPLICED} {Pfam: SWIRM domain [PF04433.19, score=107.7]; SWIRM-associated region 1 [PF16495.7, score=79.7]; SWIRM-associated domain at the C-terminal [PF16498.7, score=49.2]; Myb-like DNA-binding domain [PF00249.33, score=42.7]; Myb-like DNA-binding domain [PF13921.8, score=28.7]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [RH, Score=450, Expect=3e-144]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [RH, Score=451, Expect=8e-146]} {Dmel: FBgn0002783, mor, moira, [RH, Score=339, Expect=3e-103]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [RH, Score=331, Expect=1e-103]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [RH, Score=405, Expect=2e-127]} {RNA1509_39768, RNA1509_54926} {RNA1310_5494.1, RNA1509_39768, RNA1509_54926} {RNA1509_39768, RNA1509_54926, RNA815_8217}
6.	MligTC455_48327	2347	48.9	Mlig455_046907	Neo: - Age: Up-Down-Up Regeneration-enriched BL: 1.482 Regeneration-enriched R6: 1.344	EIF2S3	1.676	0.722	-	-	0.954	-	-	Mlig455_046907 {REF} {Length: 2665} {TRANSSPLICED} {Pfam: Initiation factor eIF2 gamma, C terminal [PF09173.13, score=114.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=78.7]; Elongation factor Tu domain 2 [PF03144.27, score=44.1]} {Human: ENSG00000130741, EIF2S3, eukaryotic translation initiation factor 2 subunit gamma, [RH, Score=741, Expect=0.0]; ENSG00000180574, EIF2S3B, eukaryotic translation initiation factor 2 subunit gamma B, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000069049, Eif2s3y, eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked, [RH, Score=745, Expect=0.0]; ENSMUSG00000035150, Eif2s3x, eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked, [RH, Score=741, Expect=0.0]} {Dmel: FBgn0263740, eIF2gamma, eukaryotic translation initiation factor 2 subunit gamma, [RH, Score=713, Expect=0.0]} {Celegans: WBGene00021466, eif-2gamma, Eukaryotic Initiation Factor, [RH, Score=712, Expect=0.0]} {Smed: dd_Smed_v6_980_0_1, dd_Smed_v6_980_0_1, [RH, Score=678, Expect=0.0]} {RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895} {RNA1310_16815.1, RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895} {RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895, RNA815_7319}
7.	MligTC455_48326	2328	48.51	Mlig455_016492	Neo: Int S/G2/M Age: logFC(26M/2M)=1.013 Regeneration-enriched BL: 1.725 Regeneration-enriched R6: 1.385	EIF2S3B	1.663	0.704	-	-	0.959	-	-	Mlig455_016492 {REF} {Length: 2643} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=78.9]; Initiation factor eIF2 gamma, C terminal [PF09173.13, score=73.2]; Elongation factor Tu domain 2 [PF03144.27, score=45.3]} {Human: ENSG00000180574, EIF2S3B, eukaryotic translation initiation factor 2 subunit gamma B, [RH, Score=686, Expect=0.0]} {Mouse: ENSMUSG00000069049, Eif2s3y, eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked, [Score=701, Expect=0.0]; ENSMUSG00000035150, Eif2s3x, eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked, [Score=697, Expect=0.0]} {Dmel: FBgn0263740, eIF2gamma, eukaryotic translation initiation factor 2 subunit gamma, [Score=677, Expect=0.0]} {Celegans: WBGene00021466, eif-2gamma, Eukaryotic Initiation Factor, [RH, Score=677, Expect=0.0]} {Smed: dd_Smed_v6_980_0_1, dd_Smed_v6_980_0_1, [Score=634, Expect=0.0]} {RNA1509_3210} {RNA1310_16815.1} {RNA815_7319}
8.	MligTC455_41159	112	2.33	Mlig455_014878	Neo: - Age: -		0.96	-	-	-	0.960	-	-	Mlig455_014878 {REF} {Length: 1646} {RNA1509_5537} {RNA1310_2775} {RNA815_5708}
9.	MligTC455_18668	1636	34.09	Mlig455_012434, Mlig455_012558, Mlig455_012563, Mlig455_027620	Neo: Int S/G2/M Age: - Region-enriched R5: 1.208/0.04430		0.956	-	-	-	0.956	-	-	Mlig455_012434 {REF} {Length: 2933} {RNA1509_24772} {RNA1310_6123.1} {RNA815_1284.1} Mlig455_012558 {REF} {Length: 3241} {TRANSSPLICED} {RNA1509_24772} {RNA1310_6123.1, RNA1509_24772} {RNA1509_24772, RNA815_1284.1} Mlig455_012563 {REF} {Length: 2852} {TRANSSPLICED} {RNA1509_24772} {RNA1310_6123.1} {RNA815_1284.1} Mlig455_027620 {REF} {Length: 432} {NoTransDecoderORF} {RNA1310_82755} {RNA815_51913}

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