TomoSeq data search

Data search

Results for MligTC455_27195

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27195	4	0.08	Mlig455_009910	Neo: - Age: -	ANKRD29	Mlig455_009910 {REF} {Length: 2231} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=171.2]; Ankyrin repeat [PF00023.32, score=124.2]; Ankyrin repeat [PF13606.8, score=102.1]; Ankyrin repeats (many copies) [PF13637.8, score=98.7]; Ankyrin repeats (many copies) [PF13857.8, score=81.5]; Glutamine amidotransferase domain [PF13537.8, score=25.0]; PEGA domain [PF08308.13, score=23.9]} {Human: ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=123, Expect=5e-33]} {Mouse: ENSMUSG00000057766, Ankrd29, ankyrin repeat domain 29, [Score=121, Expect=5e-32]} {Dmel: FBgn0031473, CG3104, [Score=108, Expect=2e-27]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=106, Expect=1e-25]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=130, Expect=2e-34]} {RNA1509_42328} {RNA1310_46182} {RNA815_12581.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_27195

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_27195

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27195	4	0.08	Mlig455_009910	Neo: - Age: -	ANKRD29	1	-	-	-	-	1.000	-	Mlig455_009910 {REF} {Length: 2231} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=171.2]; Ankyrin repeat [PF00023.32, score=124.2]; Ankyrin repeat [PF13606.8, score=102.1]; Ankyrin repeats (many copies) [PF13637.8, score=98.7]; Ankyrin repeats (many copies) [PF13857.8, score=81.5]; Glutamine amidotransferase domain [PF13537.8, score=25.0]; PEGA domain [PF08308.13, score=23.9]} {Human: ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=123, Expect=5e-33]} {Mouse: ENSMUSG00000057766, Ankrd29, ankyrin repeat domain 29, [Score=121, Expect=5e-32]} {Dmel: FBgn0031473, CG3104, [Score=108, Expect=2e-27]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=106, Expect=1e-25]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=130, Expect=2e-34]} {RNA1509_42328} {RNA1310_46182} {RNA815_12581.1}
2.	MligTC455_06645	3	0.07	Mlig455_048818	Neo: - Age: -		0.996	-	-	-	-	0.996	-	Mlig455_048818 {REF} {Length: 372} {NoTransDecoderORF}
3.	MligTC455_06900	7	0.15	Mlig455_039369	Neo: Irradiation Age: -		0.996	-	-	-	-	0.996	-	Mlig455_039369 {REF} {Length: 2160} {NoTransDecoderORF} {RNA1509_8714} {RNA1310_10572.1} {RNA815_7460.1}
4.	MligTC455_11287	42	0.87	Mlig455_033901	Neo: - Age: - Region-enriched R5: 4.474/0.00096		0.996	-	-	-	-	0.996	-	Mlig455_033901 {REF} {Length: 674} {RNA1310_69364} {RNA815_35056}
5.	MligTC455_14592	5	0.1	Mlig455_056678	Neo: - Age: -		0.996	-	-	-	-	0.996	-	Mlig455_056678 {REF} {Length: 593} {NoTransDecoderORF} {RNA1310_138511}
6.	MligTC455_30032	162	3.37	Mlig455_056967	Neo: Germline Age: Up-Down-Down, logFC(26M/2M)=-0.345 Region-specific R4: 5.157		0.996	-	-	-	-	0.996	-	Mlig455_056967 {REF} {Length: 4232} {RNA1509_28811} {RNA1310_35298, RNA1509_28811} {RNA1509_28811, RNA815_21309}
7.	MligTC455_56305	3	0.06	Mlig455_010408	Neo: - Age: -		0.996	-	-	-	-	0.996	-	Mlig455_010408 {REF} {Length: 243} {NoTransDecoderORF}
8.	MligTC455_20271	58	1.2	Mlig455_013994	Neo: Germline Age: Up-Down-Up		0.994	-	-	-	-	0.994	-	Mlig455_013994 {REF} {Length: 1947} {RNA1509_45350} {RNA1310_35055, RNA1509_45350} {RNA1509_45350, RNA815_40723}
9.	MligTC455_10277	34	0.72	Mlig455_036089	Neo: - Age: -		0.988	-	-	-	-	0.988	-	Mlig455_036089 {REF} {Length: 392} {NoTransDecoderORF} {RNA1509_14725} {RNA1310_79450} {RNA815_4200.3}
10.	MligTC455_14440	8	0.17	Mlig455_042058	Neo: - Age: -		0.988	-	-	-	-	0.988	-	Mlig455_042058 {REF} {Length: 1757} {Smed: dd_Smed_v6_20444_0_1, dd_Smed_v6_20444_0_1, [RH, Score=94.7, Expect=3e-21]} {RNA1310_55922} {RNA815_31957}
11.	MligTC455_43526	6	0.13	Mlig455_064719	Neo: - Age: -	FAM166B	0.986	-	-	-	-	0.986	-	Mlig455_064719 {REF} {Length: 1476} {Pfam: Protein of unknown function (DUF2475) [PF10629.11, score=21.2]} {Human: ENSG00000215187, FAM166B, family with sequence similarity 166 member B, [Score=48.5, Expect=4e-06]} {Mouse: ENSMUSG00000042788, Fam166b, family with sequence similarity 166, member B, [Score=49.7, Expect=1e-06]} {RNA1509_31500} {RNA1310_52581} {RNA815_48502}
12.	MligTC455_16395	9	0.19	Mlig455_039674	Neo: Irradiation Age: Up-Down-Down	BEST1	0.983	-	-	-	-	0.983	-	Mlig455_039674 {REF} {Length: 3836} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=198.7]} {Human: ENSG00000167995, BEST1, bestrophin 1, [Score=230, Expect=7e-70]; ENSG00000142959, BEST4, bestrophin 4, [Score=230, Expect=6e-71]; ENSG00000039987, BEST2, bestrophin 2, [Score=229, Expect=3e-70]; ENSG00000127325, BEST3, bestrophin 3, [Score=224, Expect=1e-66]} {Mouse: ENSMUSG00000052819, Best2, bestrophin 2, [Score=233, Expect=5e-72]; ENSMUSG00000037418, Best1, bestrophin 1, [Score=225, Expect=2e-68]; ENSMUSG00000020169, Best3, bestrophin 3, [Score=224, Expect=4e-67]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=238, Expect=5e-72]} {Celegans: WBGene00014989, best-23, Bestrophin homolog, [Score=189, Expect=3e-56]} {Smed: dd_Smed_v6_3859_0_1, dd_Smed_v6_3859_0_1, [Score=374, Expect=2e-127]} {RNA1509_15872} {RNA1310_16599.1} {RNA815_10905}
13.	MligTC455_27486	48	1.01	Mlig455_040202	Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.604		0.98	-	-	-	-	0.980	-	Mlig455_040202 {REF} {Length: 2541} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=106.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.0]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=52.0, Expect=7e-07]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=52.0, Expect=7e-07]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=117, Expect=5e-32]} {RNA1509_56078} {RNA1310_617} {RNA815_3663}
14.	MligTC455_35285	8	0.17	Mlig455_033336	Neo: - Age: -		0.98	-	-	-	-	0.980	-	Mlig455_033336 {REF} {Length: 2740} {Pfam: PT repeat [PF04886.14, score=19.7]} {RNA1310_13604} {RNA815_12772}
15.	MligTC455_49317	5	0.1	Mlig455_042062	Neo: - Age: -		0.979	-	-	-	-	0.979	-	Mlig455_042062 {REF} {Length: 1473} {Smed: dd_Smed_v6_18585_0_1, dd_Smed_v6_18585_0_1, [RH, Score=135, Expect=5e-36]} {RNA1310_54922} {RNA815_28996}
16.	MligTC455_52161	76	1.59	Mlig455_027470	Neo: Irradiation Age: Down-Up-Down		0.979	-	-	-	-	0.979	-	Mlig455_027470 {REF} {Length: 835} {RNA1509_47532} {RNA1310_48663, RNA1509_47532} {RNA1509_47532, RNA815_37762}
17.	MligTC455_49404	13	0.27	Mlig455_065361	Neo: Irradiation Age: -	SNAI2	0.978	-	-	-	-	0.978	-	Mlig455_065361 {REF} {Length: 4804} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=25.8]; C2H2-type zinc finger [PF13894.8, score=24.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.2]; Zinc-finger of C2H2 type [PF12874.9, score=21.7]; C2H2-type zinc finger [PF13912.8, score=19.6]} {Human: ENSG00000019549, SNAI2, snail family transcriptional repressor 2, [Score=79.0, Expect=5e-16]; ENSG00000215397, SCRT2, scratch family transcriptional repressor 2, [Score=77.8, Expect=2e-15]} {Mouse: ENSMUSG00000022676, Snai2, snail family zinc finger 2, [Score=79.3, Expect=3e-16]; ENSMUSG00000060257, Scrt2, scratch family zinc finger 2, [Score=77.4, Expect=2e-15]; ENSMUSG00000048385, Scrt1, scratch family zinc finger 1, [Score=76.6, Expect=5e-15]} {Dmel: FBgn0035144, Kah, Kahuli, [Score=96.3, Expect=2e-21]} {Celegans: WBGene00000468, ces-1, CES-1; CEll death Specification, [Score=74.3, Expect=8e-15]} {Smed: dd_Smed_v6_18952_0_1, dd_Smed_v6_18952_0_1, [Score=71.2, Expect=2e-13]} {RNA1509_53634} {RNA1310_40586.1} {RNA815_44827}
18.	MligTC455_14351	20	0.42	Mlig455_033296	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_033296 {REF} {Length: 904} {NoTransDecoderORF} {RNA1310_77166} {RNA815_51589}
19.	MligTC455_46453	12	0.25	Mlig455_041607	Neo: - Age: -	SLC33A1	0.973	-	-	-	-	0.973	-	Mlig455_041607 {REF} {Length: 2163} {TRANSSPLICED} {Pfam: Acetyl-coenzyme A transporter 1 [PF13000.9, score=353.2]} {Human: ENSG00000169359, SLC33A1, solute carrier family 33 member 1, [RH, Score=434, Expect=5e-146]} {Mouse: ENSMUSG00000027822, Slc33a1, solute carrier family 33 (acetyl-CoA transporter), member 1, [RH, Score=434, Expect=5e-146]} {Dmel: FBgn0036662, CG9706, [RH, Score=414, Expect=8e-139]} {Celegans: WBGene00012033, T26C5.3, [RH, Score=405, Expect=4e-135]} {Smed: dd_Smed_v6_6308_0_1, dd_Smed_v6_6308_0_1, [RH, Score=501, Expect=5e-173]} {RNA1509_8415} {RNA1310_9664, RNA1509_8415} {RNA1509_8415, RNA815_3329.1}
20.	MligTC455_38213	20	0.41	Mlig455_009922	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_009922 {REF} {Length: 459} {NoTransDecoderORF} {RNA1509_54683} {RNA1310_22137} {RNA815_61625}
21.	MligTC455_52499	11	0.24	Mlig455_030393	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_030393 {REF} {Length: 1065} {RNA1509_53422} {RNA1310_48794} {RNA815_63128}
22.	MligTC455_14099	146	3.05	Mlig455_013550	Neo: Irradiation Age: - Region-enriched R4: 3.876/0.00000 Region-enriched R3: 2.504/0.03006		0.97	-	-	-	-	0.970	-	Mlig455_013550 {REF} {Length: 1224} {NoTransDecoderORF} {RNA1509_43167} {RNA1310_35284, RNA1509_43167} {RNA1509_43167, RNA815_31876}
23.	MligTC455_26246	17	0.35	Mlig455_013416, Mlig455_047122, Mlig455_047123, Mlig455_055769	Neo: - Age: Up-Down-Down		0.97	-	-	-	-	0.970	-	Mlig455_013416 {REF} {Length: 4350} {Pfam: Integrase core domain [PF00665.28, score=42.4]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=52.0, Expect=2e-07]} {RNA1509_31888} {RNA1310_1190} {RNA815_22519} Mlig455_047122 {REF} {Length: 383} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=26.5]; Aspartyl protease [PF13650.8, score=25.6]; Zinc knuckle [PF00098.25, score=21.5]} {RNA1509_31888} {RNA1310_12942} {RNA815_47299} Mlig455_047123 {REF} {Length: 367} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=116.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=85.7]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=98.2, Expect=4e-27]} {RNA1509_42532} {RNA1310_1190} {RNA815_22519} Mlig455_055769 {REF} {Length: 1510} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=26.5]; Aspartyl protease [PF13650.8, score=25.6]; Zinc knuckle [PF00098.25, score=21.5]} {RNA1509_31888} {RNA1310_12942} {RNA815_11366.1}
24.	MligTC455_28114	16	0.33	Mlig455_002413	Neo: - Age: -		0.97	-	-	-	-	0.970	-	Mlig455_002413 {REF} {Length: 1446} {TRANSSPLICED} {RNA1310_53298} {RNA815_30466}
25.	MligTC455_38217	71	1.48	Mlig455_038564, Mlig455_052193, Mlig455_053460	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_038564 {REF} {Length: 474} {NoTransDecoderORF} {RNA1509_54683} {RNA1310_22137} {RNA815_61625} Mlig455_052193 {REF} {Length: 428} {NoTransDecoderORF} {RNA1509_54683} {RNA1310_22137} {RNA815_61625} Mlig455_053460 {REF} {Length: 474} {NoTransDecoderORF} {RNA1509_54683} {RNA1310_22137} {RNA815_61625}
26.	MligTC455_05495	24	0.51	Mlig455_004288	Neo: - Age: -		0.967	-	-	-	-	0.967	-	Mlig455_004288 {REF} {Length: 1451} {RNA1509_36497} {RNA1310_33028.2} {RNA815_15751}
27.	MligTC455_10471	6	0.13	Mlig455_002235	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_002235 {REF} {Length: 1163} {NoTransDecoderORF} {RNA1310_53043}
28.	MligTC455_10867	57	1.18	Mlig455_046891	Neo: Germline Age: Up-Down-Down Region-enriched R4: 5.521/0.00948		0.963	-	-	-	-	0.963	-	Mlig455_046891 {REF} {Length: 2746} {RNA1509_42777} {RNA1310_7703.1, RNA1509_42777} {RNA1509_42777, RNA815_8578}
29.	MligTC455_12093	12	0.24	Mlig455_052293	Neo: - Age: - Region-enriched R2: 6.938/0.00677		0.963	-	-	-	-	0.963	-	Mlig455_052293 {REF} {Length: 1337} {RNA1310_83153} {RNA815_43915}
30.	MligTC455_49771	61	1.26	Mlig455_018423	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_018423 {REF} {Length: 2813} {RNA1509_25822} {RNA1310_57791} {RNA815_29848}
31.	MligTC455_38345	26	0.53	Mlig455_044919	Neo: - Age: logFC(26M/2M)=1.537		0.955	-	-	-	-	0.955	-	Mlig455_044919 {REF} {Length: 1662} {TRANSSPLICED} {RNA1509_30974} {RNA1310_33367} {RNA815_15130}
32.	MligTC455_06041	29	0.6	Mlig455_018028	Neo: Germline Age: Up-Down-Down		0.954	-	-	-	-	0.954	-	Mlig455_018028 {REF} {Length: 1029} {RNA1310_49697.1} {RNA815_45512}
33.	MligTC455_12210	31	0.64	Mlig455_032051	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_032051 {REF} {Length: 735} {RNA1310_3033.2} {RNA815_60595}
34.	MligTC455_06698	12	0.24	Mlig455_028883	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_028883 {REF} {Length: 458} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15645} {RNA1310_22254} {RNA815_43135}
35.	MligTC455_10362	37	0.77	Mlig455_046555	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_046555 {REF} {Length: 3814} {NoTransDecoderORF} {RNA1509_25000} {RNA1310_108245} {RNA815_2326}