TomoSeq data search

Data search

Results for MligTC455_27212

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27212	26	0.55	Mlig455_009694	Neo: Irradiation Age: Down-Up-Down	PRR9	Mlig455_009694 {REF} {Length: 1891} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.0, Expect=6e-06]} {Celegans: WBGene00008559, F07H5.8, [Score=56.2, Expect=6e-08]}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_27212

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_27212

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27212	26	0.55	Mlig455_009694	Neo: Irradiation Age: Down-Up-Down	PRR9	1	-	-	-	1.000	-	-	Mlig455_009694 {REF} {Length: 1891} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.0, Expect=6e-06]} {Celegans: WBGene00008559, F07H5.8, [Score=56.2, Expect=6e-08]}
2.	MligTC455_33745	48	0.99	Mlig455_057348, Mlig455_059577	Neo: - Age: -	NFIA, NFIC	0.972	-	-	-	0.972	-	-	Mlig455_057348 {REF} {Length: 2692} {TRANSSPLICED} {Human: ENSG00000141905, NFIC, nuclear factor I C, [RH, Score=99.4, Expect=4e-21]; ENSG00000162599, NFIA, nuclear factor I A, [RH, Score=98.6, Expect=7e-21]; ENSG00000147862, NFIB, nuclear factor I B, [RH, Score=96.3, Expect=5e-20]} {Mouse: ENSMUSG00000055053, Nfic, nuclear factor I/C, [RH, Score=98.6, Expect=3e-21]; ENSMUSG00000028565, Nfia, nuclear factor I/A, [RH, Score=98.6, Expect=4e-21]; ENSMUSG00000008575, Nfib, nuclear factor I/B, [RH, Score=96.3, Expect=4e-20]} {Dmel: FBgn0042696, NfI, Nuclear factor I, [RH, Score=95.5, Expect=8e-20]} {Celegans: WBGene00003592, nfi-1, NFI (Nuclear Factor I) family, [RH, Score=107, Expect=1e-23]} {Smed: dd_Smed_v6_12312_0_1, dd_Smed_v6_12312_0_1, [RH, Score=174, Expect=1e-44]} {RNA1509_19363} {RNA1310_11787} {RNA815_4938.1} Mlig455_059577 {REF} {Length: 4914} {TRANSSPLICED} {Human: ENSG00000162599, NFIA, nuclear factor I A, [RH, Score=98.6, Expect=7e-21]; ENSG00000147862, NFIB, nuclear factor I B, [RH, Score=96.3, Expect=5e-20]; ENSG00000141905, NFIC, nuclear factor I C, [RH, Score=96.3, Expect=4e-20]} {Mouse: ENSMUSG00000028565, Nfia, nuclear factor I/A, [RH, Score=98.6, Expect=4e-21]; ENSMUSG00000008575, Nfib, nuclear factor I/B, [RH, Score=96.3, Expect=4e-20]; ENSMUSG00000055053, Nfic, nuclear factor I/C, [RH, Score=95.9, Expect=2e-20]} {Dmel: FBgn0042696, NfI, Nuclear factor I, [RH, Score=95.5, Expect=8e-20]} {Celegans: WBGene00003592, nfi-1, NFI (Nuclear Factor I) family, [RH, Score=107, Expect=1e-23]} {Smed: dd_Smed_v6_12312_0_1, dd_Smed_v6_12312_0_1, [RH, Score=174, Expect=1e-44]} {RNA1509_19363} {RNA1310_11787} {RNA815_4938.1}
3.	MligTC455_51977	119	2.48	Mlig455_026762, Mlig455_051779	Neo: - Age: Down-Up-Up	HOXA1	0.964	-	-	-	0.964	-	-	Mlig455_026762 {REF} {Length: 2041} {Pfam: Homeodomain [PF00046.31, score=79.1]} {Human: ENSG00000105991, HOXA1, homeobox A1, [RH, Score=116, Expect=4e-30]; ENSG00000120094, HOXB1, homeobox B1, [RH, Score=114, Expect=8e-30]; ENSG00000128645, HOXD1, homeobox D1, [RH, Score=111, Expect=2e-28]} {Mouse: ENSMUSG00000029844, Hoxa1, homeobox A1, [RH, Score=116, Expect=2e-30]; ENSMUSG00000042448, Hoxd1, homeobox D1, [RH, Score=113, Expect=4e-29]} {Dmel: FBgn0002522, lab, labial, [RH, Score=118, Expect=4e-30]} {Celegans: WBGene00000437, ceh-13, Homeobox protein ceh-13, [RH, Score=85.1, Expect=6e-20]} {Smed: dd_Smed_v6_62255_0_1, dd_Smed_v6_62255_0_1, [RH, Score=121, Expect=3e-34]} {RNA1310_35369} {RNA815_17610} Mlig455_051779 {REF} {Length: 2283} {Pfam: Homeodomain [PF00046.31, score=80.2]} {Human: ENSG00000105991, HOXA1, homeobox A1, [RH, Score=118, Expect=7e-31]; ENSG00000120094, HOXB1, homeobox B1, [RH, Score=117, Expect=1e-30]; ENSG00000128645, HOXD1, homeobox D1, [RH, Score=114, Expect=3e-29]} {Mouse: ENSMUSG00000029844, Hoxa1, homeobox A1, [RH, Score=118, Expect=4e-31]; ENSMUSG00000018973, Hoxb1, homeobox B1, [RH, Score=116, Expect=1e-30]; ENSMUSG00000042448, Hoxd1, homeobox D1, [RH, Score=115, Expect=5e-30]} {Dmel: FBgn0002522, lab, labial, [RH, Score=120, Expect=8e-31]} {Celegans: WBGene00000437, ceh-13, Homeobox protein ceh-13, [RH, Score=83.6, Expect=2e-19]} {Smed: dd_Smed_v6_62255_0_1, dd_Smed_v6_62255_0_1, [RH, Score=122, Expect=6e-35]} {RNA1509_53134} {RNA1310_35369} {RNA815_17610}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_27212

0.55

Mlig455_009694

Neo: Irradiation

Age: Down-Up-Down

PRR9

1.000

Mlig455_009694 {REF} {Length: 1891} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.0, Expect=6e-06]} {Celegans: WBGene00008559, F07H5.8, [Score=56.2, Expect=6e-08]}

MligTC455_33745

0.99

Mlig455_057348, Mlig455_059577

Neo: -

Age: -

NFIA, NFIC

0.972

Mlig455_057348 {REF} {Length: 2692} {TRANSSPLICED} {Human: ENSG00000141905, NFIC, nuclear factor I C, [RH, Score=99.4, Expect=4e-21]; ENSG00000162599, NFIA, nuclear factor I A, [RH, Score=98.6, Expect=7e-21]; ENSG00000147862, NFIB, nuclear factor I B, [RH, Score=96.3, Expect=5e-20]} {Mouse: ENSMUSG00000055053, Nfic, nuclear factor I/C, [RH, Score=98.6, Expect=3e-21]; ENSMUSG00000028565, Nfia, nuclear factor I/A, [RH, Score=98.6, Expect=4e-21]; ENSMUSG00000008575, Nfib, nuclear factor I/B, [RH, Score=96.3, Expect=4e-20]} {Dmel: FBgn0042696, NfI, Nuclear factor I, [RH, Score=95.5, Expect=8e-20]} {Celegans: WBGene00003592, nfi-1, NFI (Nuclear Factor I) family, [RH, Score=107, Expect=1e-23]} {Smed: dd_Smed_v6_12312_0_1, dd_Smed_v6_12312_0_1, [RH, Score=174, Expect=1e-44]} {RNA1509_19363} {RNA1310_11787} {RNA815_4938.1}

Mlig455_059577 {REF} {Length: 4914} {TRANSSPLICED} {Human: ENSG00000162599, NFIA, nuclear factor I A, [RH, Score=98.6, Expect=7e-21]; ENSG00000147862, NFIB, nuclear factor I B, [RH, Score=96.3, Expect=5e-20]; ENSG00000141905, NFIC, nuclear factor I C, [RH, Score=96.3, Expect=4e-20]} {Mouse: ENSMUSG00000028565, Nfia, nuclear factor I/A, [RH, Score=98.6, Expect=4e-21]; ENSMUSG00000008575, Nfib, nuclear factor I/B, [RH, Score=96.3, Expect=4e-20]; ENSMUSG00000055053, Nfic, nuclear factor I/C, [RH, Score=95.9, Expect=2e-20]} {Dmel: FBgn0042696, NfI, Nuclear factor I, [RH, Score=95.5, Expect=8e-20]} {Celegans: WBGene00003592, nfi-1, NFI (Nuclear Factor I) family, [RH, Score=107, Expect=1e-23]} {Smed: dd_Smed_v6_12312_0_1, dd_Smed_v6_12312_0_1, [RH, Score=174, Expect=1e-44]} {RNA1509_19363} {RNA1310_11787} {RNA815_4938.1}

MligTC455_51977

119

2.48

Mlig455_026762, Mlig455_051779

Neo: -

Age: Down-Up-Up

HOXA1

0.964

Mlig455_026762 {REF} {Length: 2041} {Pfam: Homeodomain [PF00046.31, score=79.1]} {Human: ENSG00000105991, HOXA1, homeobox A1, [RH, Score=116, Expect=4e-30]; ENSG00000120094, HOXB1, homeobox B1, [RH, Score=114, Expect=8e-30]; ENSG00000128645, HOXD1, homeobox D1, [RH, Score=111, Expect=2e-28]} {Mouse: ENSMUSG00000029844, Hoxa1, homeobox A1, [RH, Score=116, Expect=2e-30]; ENSMUSG00000042448, Hoxd1, homeobox D1, [RH, Score=113, Expect=4e-29]} {Dmel: FBgn0002522, lab, labial, [RH, Score=118, Expect=4e-30]} {Celegans: WBGene00000437, ceh-13, Homeobox protein ceh-13, [RH, Score=85.1, Expect=6e-20]} {Smed: dd_Smed_v6_62255_0_1, dd_Smed_v6_62255_0_1, [RH, Score=121, Expect=3e-34]} {RNA1310_35369} {RNA815_17610}

Mlig455_051779 {REF} {Length: 2283} {Pfam: Homeodomain [PF00046.31, score=80.2]} {Human: ENSG00000105991, HOXA1, homeobox A1, [RH, Score=118, Expect=7e-31]; ENSG00000120094, HOXB1, homeobox B1, [RH, Score=117, Expect=1e-30]; ENSG00000128645, HOXD1, homeobox D1, [RH, Score=114, Expect=3e-29]} {Mouse: ENSMUSG00000029844, Hoxa1, homeobox A1, [RH, Score=118, Expect=4e-31]; ENSMUSG00000018973, Hoxb1, homeobox B1, [RH, Score=116, Expect=1e-30]; ENSMUSG00000042448, Hoxd1, homeobox D1, [RH, Score=115, Expect=5e-30]} {Dmel: FBgn0002522, lab, labial, [RH, Score=120, Expect=8e-31]} {Celegans: WBGene00000437, ceh-13, Homeobox protein ceh-13, [RH, Score=83.6, Expect=2e-19]} {Smed: dd_Smed_v6_62255_0_1, dd_Smed_v6_62255_0_1, [RH, Score=122, Expect=6e-35]} {RNA1509_53134} {RNA1310_35369} {RNA815_17610}