TomoSeq data search

Data search

Results for MligTC455_27240

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27240

11651

242.73

Mlig455_053245

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.009

Region-enriched R3: 2.361/0.00012
Region-enriched R6: 2.054/0.00497

Mlig455_053245 {REF} {Length: 914} {Pfam: ML domain [PF02221.17, score=36.3]} {RNA1509_10382, RNA1509_7205} {RNA1310_28835.1, RNA1509_10382, RNA1509_7205} {RNA1509_10382, RNA1509_7205, RNA815_6681.1}

Cumulative graph for MligTC455_27240

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.095	8.02	0.88597	1.00000
RegionR2	-3.101	8.02	0.00003	0.00158
RegionR3	2.361	8.02	0.00000	0.00012
RegionR4	1.58	8.02	0.00783	0.05075
RegionR5	0.568	8.02	0.28377	0.61303
RegionR6	2.054	8.02	0.00006	0.00497
RegionR7	-0.952	8.02	0.11760	0.64782
RegionR8	-2.415	8.02	0.00087	0.04204

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.014	8.02	0.98596	1.00000
RegenerationR2	-0.13	8.02	0.86436	1.00000
RegenerationR3	-1.198	8.02	0.10979	0.52220
RegenerationR4	-0.759	8.02	0.32481	0.76201
RegenerationR5	-0.467	8.02	0.52344	0.87121
RegenerationR6	-1.755	8.02	0.01889	0.16980
RegenerationBL	-2.563	8.02	0.00058	0.01564
RegenerationTP	-0.515	8.02	0.46888	0.87996

Genes with expression patterns similar to MligTC455_27240

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27240	11651	242.73	Mlig455_053245	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.009 Region-enriched R3: 2.361/0.00012 Region-enriched R6: 2.054/0.00497		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_053245 {REF} {Length: 914} {Pfam: ML domain [PF02221.17, score=36.3]} {RNA1509_10382, RNA1509_7205} {RNA1310_28835.1, RNA1509_10382, RNA1509_7205} {RNA1509_10382, RNA1509_7205, RNA815_6681.1}
2.	MligTC455_27244	10289	214.35	Mlig455_067857	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.836 Region-enriched R3: 3.075/0.00000 Region-enriched R4: 2.397/0.00006 Region-enriched R5: 1.397/0.01351	GM2A	3.667	-	0.919	0.860	0.969	0.919	-	Mlig455_067857 {REF} {Length: 878} {Pfam: ML domain [PF02221.17, score=40.0]} {Human: ENSG00000196743, GM2A, GM2 ganglioside activator, [Score=51.6, Expect=8e-08]} {Mouse: ENSMUSG00000000594, Gm2a, GM2 ganglioside activator protein, [Score=50.8, Expect=1e-07]} {Smed: dd_Smed_v6_214_1_1, dd_Smed_v6_214_1_1, [Score=56.2, Expect=4e-10]} {RNA1509_23026, RNA1509_960} {RNA1310_28835.1, RNA1509_23026} {RNA1509_23026, RNA815_6681.1}
3.	MligTC455_27241	10110	210.63	Mlig455_053246	Neo: - Age: Up-Up-Up, logFC(26M/2M)=2.221 Region-enriched R3: 3.010/0.00000 Region-enriched R4: 2.258/0.00047 Region-enriched R5: 1.305/0.03280	GM2A	3.637	-	0.912	0.829	0.967	0.929	-	Mlig455_053246 {REF} {Length: 888} {Pfam: ML domain [PF02221.17, score=40.0]} {Human: ENSG00000196743, GM2A, GM2 ganglioside activator, [Score=51.6, Expect=8e-08]} {Mouse: ENSMUSG00000000594, Gm2a, GM2 ganglioside activator protein, [Score=50.8, Expect=1e-07]} {Smed: dd_Smed_v6_214_1_1, dd_Smed_v6_214_1_1, [Score=56.2, Expect=4e-10]} {RNA1509_180, RNA1509_30371, RNA1509_960} {RNA1310_28835.1, RNA1509_180, RNA1509_30371, RNA1509_960} {RNA1509_180, RNA1509_30371, RNA1509_960, RNA815_6681.1}
4.	MligTC455_27242	14489	301.86	Mlig455_056957	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.849 Region-enriched R3: 2.848/0.00000 Region-enriched R5: 1.349/0.04924	GM2A	3.518	-	0.875	0.821	0.953	0.869	-	Mlig455_056957 {REF} {Length: 877} {Pfam: ML domain [PF02221.17, score=41.0]} {Human: ENSG00000196743, GM2A, GM2 ganglioside activator, [Score=51.6, Expect=7e-08]} {Mouse: ENSMUSG00000000594, Gm2a, GM2 ganglioside activator protein, [Score=50.8, Expect=1e-07]} {Smed: dd_Smed_v6_214_1_1, dd_Smed_v6_214_1_1, [Score=56.2, Expect=3e-10]} {RNA1509_960} {RNA1310_28835.1} {RNA815_6681.1}
5.	MligTC455_51131	5808	120.99	Mlig455_031629	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.484 Region-enriched R3: 3.757/0.00000 Region-enriched R4: 2.189/0.01454		3.37	-	0.901	0.706	0.973	0.790	-	Mlig455_031629 {REF} {Length: 1657} {Pfam: Glycosyl hydrolases family 16 [PF00722.23, score=60.4]} {Dmel: FBgn0040323, GNBP1, Gram-negative bacteria binding protein 1, [RH, Score=160, Expect=4e-44]} {RNA1509_304} {RNA1310_18175.2} {RNA815_10892.1}
6.	MligTC455_51488	705	14.69	Mlig455_012553	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.664 Region-enriched R3: 2.668/0.00000 Region-enriched R6: 2.438/0.00009		2.639	0.972	0.865	-	-	-	0.802	Mlig455_012553 {REF} {Length: 1481} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=34.4]} {RNA1509_12735, RNA1509_14804, RNA1509_20818} {RNA1310_19974, RNA1509_12735, RNA1509_20818} {RNA1509_12735, RNA1509_20818, RNA815_8492}
7.	MligTC455_28661	1197	24.95	Mlig455_003667	Neo: - Age: logFC(26M/2M)=0.386 Region-enriched R3: 3.225/0.00000 Region-enriched R4: 1.619/0.02931		2.563	-	0.820	-	0.975	0.768	-	Mlig455_003667 {REF} {Length: 2846} {RNA1509_11217, RNA1509_19513, RNA1509_20197} {RNA1310_24401, RNA1509_11217, RNA1509_19513, RNA1509_20197} {RNA1509_11217, RNA1509_19513, RNA1509_20197, RNA815_10016}
8.	MligTC455_31554	12688	264.32	Mlig455_003094	Neo: - Age: Down-Up-Down Region-enriched R4: 2.454/0.01927		2.421	-	0.725	0.738	0.958	-	-	Mlig455_003094 {REF} {Length: 2681} {Pfam: Wolframin Sel1-like repeat [PF20023.1, score=52.7]; Crp-like helix-turn-helix domain [PF13545.8, score=50.3]; 4'-phosphopantetheinyl transferase superfamily [PF01648.22, score=47.0]; Family of unknown function (DUF6307) [PF19826.1, score=42.0]; MarR family [PF01047.24, score=38.3]; Ribosomal protein L10 [PF00466.22, score=38.1]; Skp1 family, tetramerisation domain [PF03931.17, score=35.7]; PASTA domain [PF03793.21, score=32.0]; Family of unknown function (DUF6470) [PF20074.1, score=32.0]; D-lactate dehydrogenase, membrane binding [PF09330.13, score=30.1]; SprT-like family [PF10263.11, score=26.5]; winged helix-turn-helix [PF16221.7, score=26.3]; CUT domain [PF02376.17, score=24.1]; Helicase HerA, central domain [PF01935.19, score=22.5]; Bpu10I restriction endonuclease [PF09549.12, score=22.1]; von Willebrand factor type A domain [PF13768.8, score=21.6]; Protein of unknown function (DUF1340) [PF07067.13, score=21.0]; Mobile element transfer protein [PF05122.15, score=18.8]} {RNA1509_27680} {RNA1310_14862.1} {RNA815_5816}
9.	MligTC455_44576	827	17.23	Mlig455_035737	Neo: - Age: Down-Down-Down Region-enriched R3: 3.810/0.00000 Region-enriched R4: 2.716/0.00215	NPC2	1.848	-	0.871	-	0.977	-	-	Mlig455_035737 {REF} {Length: 750} {Pfam: ML domain [PF02221.17, score=97.3]} {Human: ENSG00000119655, NPC2, NPC intracellular cholesterol transporter 2, [RH, Score=136, Expect=2e-40]} {Mouse: ENSMUSG00000021242, Npc2, NPC intracellular cholesterol transporter 2, [RH, Score=132, Expect=5e-40]} {Dmel: FBgn0031381, Npc2a, Niemann-Pick type C-2a, [RH, Score=144, Expect=1e-44]} {Smed: dd_Smed_v6_602_0_1, dd_Smed_v6_602_0_1, [RH, Score=139, Expect=6e-43]} {RNA1509_4097, RNA1509_41414} {RNA1310_51205, RNA1509_4097, RNA1509_41414} {RNA1509_4097, RNA1509_41414, RNA815_27598}
10.	MligTC455_49124	1349	28.1	Mlig455_051221	Neo: - Age: Down-Down-Up, logFC(26M/2M)=3.438 Region-enriched R3: 4.637/0.00000 Region-enriched R4: 2.731/0.00586 Regeneration-upregulated R6: 4.256 Regeneration-enriched R6: 4.256		1.794	-	-	-	0.970	0.824	-	Mlig455_051221 {REF} {Length: 914} {RNA1509_6539} {RNA1310_2644.1, RNA1509_6539} {RNA1509_6539, RNA815_462.1}

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