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Results for MligTC455_27340

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27340 38 0.80 Mlig455_020121

Neo: -

Age: Up-Down-Down

 Mlig455_020121 {REF} {Length: 5797} {NoTransDecoderORF} {RNA1509_39201, RNA1509_40586} {RNA1310_40894.1, RNA1509_39201, RNA1509_40586} {RNA1509_39201, RNA1509_40586, RNA815_14343.2}

Cumulative graph for MligTC455_27340

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.33 1.045 0.99998 1.00000
RegionR2 -0.66 1.045 0.99989 1.00000
RegionR3 0.219 1.045 1.00000 1.00000
RegionR4 0.522 1.045 1.00000 1.00000
RegionR5 0.435 1.045 1.00000 1.00000
RegionR6 -0.062 1.045 0.99998 1.00000
RegionR7 -0.175 1.045 1.00000 1.00000
RegionR8 0.051 1.045 0.99997 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.775 1.045 0.77445 1.00000
RegenerationR2 4.249 1.045 0.00204 0.06891
RegenerationR3 3.349 1.045 0.06805 0.43844
RegenerationR4 2.612 1.045 0.07663 0.44043
RegenerationR5 2.77 1.045 0.05079 0.36278
RegenerationR6 3.23 1.045 0.09924 0.39124
RegenerationBL 4.945 1.045 0.00951 0.09781
RegenerationTP 2.258 1.045 0.44046 0.86034


Genes with expression patterns similar to MligTC455_27340

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27340 38 0.8 Mlig455_020121

Neo: -

Age: Up-Down-Down

 3 - - - 1.000 1.000 1.000 Mlig455_020121 {REF} {Length: 5797} {NoTransDecoderORF} {RNA1509_39201, RNA1509_40586} {RNA1310_40894.1, RNA1509_39201, RNA1509_40586} {RNA1509_39201, RNA1509_40586, RNA815_14343.2}
2. MligTC455_49829 606 12.63 Mlig455_018528

Neo: -

Age: -

Region-enriched R8: 5.323/0.00000

 1.799 - - - 0.847 0.952 - Mlig455_018528 {REF} {Length: 3314} {Pfam: Plectin repeat [PF00681.22, score=39.5]; SH3 domain [PF17902.3, score=22.5]} {Dmel: FBgn0013733, shot, short stop, [Score=57.0, Expect=9e-08]} {Celegans: WBGene00006952, wrt-6, Warthog protein 6 Warthog protein 6 N-product Warthog protein 6 C-product, [Score=51.2, Expect=3e-06]} {RNA1509_40966} {RNA1310_5072.1} {RNA815_12828}
3. MligTC455_52693 53 1.09 Mlig455_010844

Neo: -

Age: -

 0.973 - - - - - 0.973 Mlig455_010844 {REF} {Length: 2348} {NoTransDecoderORF} {RNA1310_45390} {RNA815_62908}
4. MligTC455_23338 206 4.29 Mlig455_033045, Mlig455_053128

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.721

 NEFH 0.968 - - - 0.968 - -

Mlig455_033045 {REF} {Length: 9317} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=111, Expect=1e-24]} {Dmel: FBgn0029807, CG3108, [Score=53.1, Expect=8e-07]} {RNA1509_6333} {RNA1310_785} {RNA815_2080}

Mlig455_053128 {REF} {Length: 16958} {Human: ENSG00000100285, NEFH, neurofilament heavy, [Score=51.6, Expect=5e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=114, Expect=1e-25]} {Dmel: FBgn0029807, CG3108, [Score=52.4, Expect=1e-06]} {RNA1509_28919, RNA1509_6333} {RNA1310_785, RNA1509_28919} {RNA1509_28919, RNA815_2080}
5. MligTC455_03269 100 2.08 Mlig455_055747, Mlig455_070968

Neo: -

Age: -

 KCTD16 0.962 - - - - 0.962 -

Mlig455_055747 {REF} {Length: 734} {Pfam: BTB/POZ domain [PF02214.24, score=57.6]} {Human: ENSG00000183775, KCTD16, potassium channel tetramerization domain containing 16, [RH, Score=174, Expect=1e-51]; ENSG00000178695, KCTD12, potassium channel tetramerization domain containing 12, [RH, Score=166, Expect=2e-49]} {Mouse: ENSMUSG00000051401, Kctd16, potassium channel tetramerisation domain containing 16, [RH, Score=176, Expect=2e-52]} {Dmel: FBgn0038839, Ktl, Kctd12-like, [RH, Score=251, Expect=3e-84]} {Celegans: WBGene00014848, VM106R.1, [RH, Score=178, Expect=6e-55]} {Smed: dd_Smed_v6_12440_0_1, dd_Smed_v6_12440_0_1, [RH, Score=242, Expect=5e-81]} {RNA1310_34396} {RNA815_14650}

Mlig455_070968 {REF} {Length: 1087} {Pfam: BTB/POZ domain [PF02214.24, score=57.6]} {Human: ENSG00000183775, KCTD16, potassium channel tetramerization domain containing 16, [RH, Score=174, Expect=1e-51]; ENSG00000178695, KCTD12, potassium channel tetramerization domain containing 12, [RH, Score=166, Expect=2e-49]} {Mouse: ENSMUSG00000051401, Kctd16, potassium channel tetramerisation domain containing 16, [RH, Score=176, Expect=2e-52]} {Dmel: FBgn0038839, Ktl, Kctd12-like, [RH, Score=251, Expect=3e-84]} {Celegans: WBGene00014848, VM106R.1, [RH, Score=178, Expect=6e-55]} {Smed: dd_Smed_v6_12440_0_1, dd_Smed_v6_12440_0_1, [RH, Score=242, Expect=5e-81]} {RNA1310_34396} {RNA815_14650}
6. MligTC455_33870 60 1.25 Mlig455_008442

Neo: -

Age: -

 KCNIP1 0.959 - - - - 0.959 - Mlig455_008442 {REF} {Length: 4465} {Pfam: EF hand [PF00036.34, score=66.1]; EF-hand domain [PF13405.8, score=54.5]; EF-hand domain pair [PF13499.8, score=53.6]; EF hand [PF13202.8, score=45.4]; EF-hand domain pair [PF13833.8, score=33.6]; Dockerin type I domain [PF00404.20, score=19.9]} {Human: ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=164, Expect=1e-49]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=157, Expect=5e-47]; ENSG00000115041, KCNIP3, potassium voltage-gated channel interacting protein 3, [Score=156, Expect=4e-46]} {Mouse: ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=165, Expect=3e-50]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=157, Expect=3e-47]} {Dmel: FBgn0039380, CG5890, [Score=157, Expect=2e-47]} {Celegans: WBGene00008998, ncs-4, Neuronal Calcium Sensor family, [Score=110, Expect=4e-29]} {Smed: dd_Smed_v6_9727_0_1, dd_Smed_v6_9727_0_1, [Score=147, Expect=3e-43]} {RNA1509_22651} {RNA1310_622.1} {RNA815_2514.1}
7. MligTC455_13006 55 1.15 Mlig455_044901

Neo: -

Age: -

 PCDH11Y 0.957 - - - - 0.957 - Mlig455_044901 {REF} {Length: 6092} {Pfam: Cadherin domain [PF00028.19, score=276.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.8]; Cadherin-like [PF08266.14, score=44.2]; Cadherin-like [PF16184.7, score=39.5]; Cadherin prodomain like [PF08758.13, score=30.3]} {Human: ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=292, Expect=5e-80]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=291, Expect=5e-80]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=281, Expect=9e-78]} {Dmel: FBgn0001075, ft, fat, [Score=239, Expect=3e-63]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=206, Expect=3e-53]} {Smed: dd_Smed_v6_18373_0_1, dd_Smed_v6_18373_0_1, [Score=290, Expect=1e-80]} {RNA1509_54067} {RNA1310_21501} {RNA815_32416}
8. MligTC455_32521 203 4.23 Mlig455_040932

Neo: -

Age: Down-Down-Up

Region-enriched R8: 3.877/0.00012
Region-enriched R2: 3.007/0.00212

 0.957 - - - - 0.957 - Mlig455_040932 {REF} {Length: 1862} {RNA1310_21335.1} {RNA815_57481}
9. MligTC455_25440 119 2.48 Mlig455_061218

Neo: Irradiation

Age: -

 PWP2 0.954 - - - 0.954 - - Mlig455_061218 {REF} {Length: 3317} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=140.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=86.2]; Dip2/Utp12 Family [PF04003.14, score=38.1]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=23.8]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=21.5]} {Human: ENSG00000241945, PWP2, PWP2, small subunit processome component, [RH, Score=519, Expect=1e-169]; ENSG00000275464, FP565260.1, periodic tryptophan protein 2 homolog, [RH, Score=518, Expect=5e-169]} {Mouse: ENSMUSG00000032834, Pwp2, PWP2 periodic tryptophan protein homolog (yeast), [RH, Score=505, Expect=3e-164]} {Dmel: FBgn0033557, CG12325, [RH, Score=517, Expect=6e-169]} {Celegans: WBGene00018891, F55F8.3, Periodic tryptophan protein 2 homolog, [RH, Score=409, Expect=5e-128]} {Smed: dd_Smed_v6_6675_0_1, dd_Smed_v6_6675_0_1, [RH, Score=434, Expect=3e-138]} {RNA1509_25628, RNA1509_32430, RNA1509_33246} {RNA1310_3870, RNA1509_32430, RNA1509_33246} {RNA1509_32430, RNA1509_33246, RNA815_1579}
10. MligTC455_36887 1030 21.45 Mlig455_004357, Mlig455_028085, Mlig455_028098, Mlig455_028220, Mlig455_046388

Neo: Int S/G2/M

Age: Down-Down-Down, logFC(26M/2M)=-0.994

Region-enriched R4: 2.550/0.00002

 0.954 - - - 0.954 - -

Mlig455_004357 {REF} {Length: 1577} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_24468.1} {RNA815_17487.1}

Mlig455_028085 {REF} {Length: 1588} {TRANSSPLICED} {RNA1509_6383} {RNA1310_24468.1} {RNA815_17487.1}

Mlig455_028098 {REF} {Length: 946} {TRANSSPLICED} {RNA1509_6383} {RNA1310_41531.1} {RNA815_17487.1}

Mlig455_028220 {REF} {Length: 937} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_41531.1} {RNA815_17487.1}

Mlig455_046388 {REF} {Length: 886} {TRANSSPLICED} {RNA1509_6383} {RNA1310_24468.1} {RNA815_17487.1}
11. MligTC455_15684 119 2.47 Mlig455_011251

Neo: -

Age: Up-Down-Up

 SNED1 0.952 - - - - 0.952 - Mlig455_011251 {REF} {Length: 1934} {Pfam: EGF-like domain [PF00008.29, score=24.9]} {Human: ENSG00000162804, SNED1, sushi, nidogen and EGF like domains 1, [Score=54.7, Expect=3e-08]; ENSG00000148400, NOTCH1, notch 1, [Score=53.5, Expect=9e-08]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=52.4, Expect=2e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=55.1, Expect=1e-08]; ENSMUSG00000038146, Notch3, notch 3, [Score=52.8, Expect=9e-08]} {RNA1509_48141} {RNA1310_40191} {RNA815_46710}

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