TomoSeq data search

Data search

Results for MligTC455_27389

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27389	14059	292.89	Mlig455_001937	Neo: Int S/G2/M Age: Down-Up-Up	RPS20	Mlig455_001937 {REF} {Length: 555} {TRANSSPLICED} {Pfam: Ribosomal protein S10p/S20e [PF00338.24, score=93.0]} {Human: ENSG00000008988, RPS20, ribosomal protein S20, [RH, Score=177, Expect=1e-58]} {Mouse: ENSMUSG00000028234, Rps20, ribosomal protein S20, [RH, Score=177, Expect=7e-59]} {Dmel: FBgn0019936, RpS20, Ribosomal protein S20, [RH, Score=171, Expect=2e-56]} {Celegans: WBGene00004489, rps-20, Ribosomal Protein, Small subunit, [RH, Score=159, Expect=5e-52]} {Smed: dd_Smed_v6_123_0_1, dd_Smed_v6_123_0_1, [RH, Score=132, Expect=3e-41]} {RNA1509_212, RNA1509_4730, RNA1509_6885} {RNA1310_64172, RNA1509_212, RNA1509_4730, RNA1509_6885} {RNA1509_212, RNA1509_4730, RNA1509_6885, RNA815_29632}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27389

14059

292.89

Mlig455_001937

Neo: Int S/G2/M

Age: Down-Up-Up

RPS20

Mlig455_001937 {REF} {Length: 555} {TRANSSPLICED} {Pfam: Ribosomal protein S10p/S20e [PF00338.24, score=93.0]} {Human: ENSG00000008988, RPS20, ribosomal protein S20, [RH, Score=177, Expect=1e-58]} {Mouse: ENSMUSG00000028234, Rps20, ribosomal protein S20, [RH, Score=177, Expect=7e-59]} {Dmel: FBgn0019936, RpS20, Ribosomal protein S20, [RH, Score=171, Expect=2e-56]} {Celegans: WBGene00004489, rps-20, Ribosomal Protein, Small subunit, [RH, Score=159, Expect=5e-52]} {Smed: dd_Smed_v6_123_0_1, dd_Smed_v6_123_0_1, [RH, Score=132, Expect=3e-41]} {RNA1509_212, RNA1509_4730, RNA1509_6885} {RNA1310_64172, RNA1509_212, RNA1509_4730, RNA1509_6885} {RNA1509_212, RNA1509_4730, RNA1509_6885, RNA815_29632}

Cumulative graph for MligTC455_27389

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.746	8.285	0.06640	0.58211
RegionR2	-0.356	8.285	0.25441	0.63463
RegionR3	0.357	8.285	0.17886	0.70824
RegionR4	0.324	8.285	0.26438	0.56850
RegionR5	0.548	8.285	0.02907	0.12666
RegionR6	0.157	8.285	0.55228	1.00000
RegionR7	0.306	8.285	0.23666	0.86046
RegionR8	-0.59	8.285	0.04748	0.42741

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.657	8.285	0.20154	0.94225
RegenerationR2	-0.443	8.285	0.19442	0.63912
RegenerationR3	-0.489	8.285	0.15529	0.58616
RegenerationR4	-0.315	8.285	0.36851	0.79283
RegenerationR5	-0.446	8.285	0.19402	0.62562
RegenerationR6	-0.476	8.285	0.16834	0.49887
RegenerationBL	-0.12	8.285	0.68746	1.00000
RegenerationTP	0.093	8.285	0.77212	1.00000

Genes with expression patterns similar to MligTC455_27389

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27389	14059	292.89	Mlig455_001937	Neo: Int S/G2/M Age: Down-Up-Up	RPS20	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_001937 {REF} {Length: 555} {TRANSSPLICED} {Pfam: Ribosomal protein S10p/S20e [PF00338.24, score=93.0]} {Human: ENSG00000008988, RPS20, ribosomal protein S20, [RH, Score=177, Expect=1e-58]} {Mouse: ENSMUSG00000028234, Rps20, ribosomal protein S20, [RH, Score=177, Expect=7e-59]} {Dmel: FBgn0019936, RpS20, Ribosomal protein S20, [RH, Score=171, Expect=2e-56]} {Celegans: WBGene00004489, rps-20, Ribosomal Protein, Small subunit, [RH, Score=159, Expect=5e-52]} {Smed: dd_Smed_v6_123_0_1, dd_Smed_v6_123_0_1, [RH, Score=132, Expect=3e-41]} {RNA1509_212, RNA1509_4730, RNA1509_6885} {RNA1310_64172, RNA1509_212, RNA1509_4730, RNA1509_6885} {RNA1509_212, RNA1509_4730, RNA1509_6885, RNA815_29632}
2.	MligTC455_22996	30468	634.75	Mlig455_049693, Mlig455_052835	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.169	RPL37A	3.201	-	-	0.960	0.761	0.776	0.704	Mlig455_049693 {REF} {Length: 479} {TRANSSPLICED} {Pfam: Ribosomal L37ae protein family [PF01780.21, score=134.9]; C1 domain [PF03107.18, score=19.3]} {Human: ENSG00000197756, RPL37A, ribosomal protein L37a, [RH, Score=139, Expect=3e-44]} {Mouse: ENSMUSG00000046330, Rpl37a, ribosomal protein L37a, [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0261608, RpL37A, Ribosomal protein L37A, [RH, Score=140, Expect=7e-45]} {Celegans: WBGene00004456, rpl-43, 60S ribosomal protein L37a, [RH, Score=132, Expect=7e-42]} {Smed: dd_Smed_v6_140_0_1, dd_Smed_v6_140_0_1, [RH, Score=116, Expect=7e-36]} {RNA1509_1173, RNA1509_2074, RNA1509_4197} {RNA1310_72999.1, RNA1509_1173, RNA1509_2074, RNA1509_4197} {RNA1509_1173, RNA1509_2074, RNA1509_4197, RNA815_37485.1} Mlig455_052835 {REF} {Length: 464} {TRANSSPLICED} {Pfam: Ribosomal L37ae protein family [PF01780.21, score=134.9]; C1 domain [PF03107.18, score=19.3]} {Human: ENSG00000197756, RPL37A, ribosomal protein L37a, [RH, Score=139, Expect=3e-44]} {Mouse: ENSMUSG00000046330, Rpl37a, ribosomal protein L37a, [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0261608, RpL37A, Ribosomal protein L37A, [RH, Score=140, Expect=7e-45]} {Celegans: WBGene00004456, rpl-43, 60S ribosomal protein L37a, [RH, Score=132, Expect=7e-42]} {Smed: dd_Smed_v6_140_0_1, dd_Smed_v6_140_0_1, [RH, Score=116, Expect=7e-36]} {RNA1509_4197} {RNA1310_72999.2} {RNA815_37485.2}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_27389

14059

292.89

Mlig455_001937

Neo: Int S/G2/M

Age: Down-Up-Up

RPS20

1.000

MligTC455_22996

30468

634.75

Mlig455_049693, Mlig455_052835

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.169

RPL37A

3.201

0.960

0.761

0.776

0.704

Mlig455_049693 {REF} {Length: 479} {TRANSSPLICED} {Pfam: Ribosomal L37ae protein family [PF01780.21, score=134.9]; C1 domain [PF03107.18, score=19.3]} {Human: ENSG00000197756, RPL37A, ribosomal protein L37a, [RH, Score=139, Expect=3e-44]} {Mouse: ENSMUSG00000046330, Rpl37a, ribosomal protein L37a, [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0261608, RpL37A, Ribosomal protein L37A, [RH, Score=140, Expect=7e-45]} {Celegans: WBGene00004456, rpl-43, 60S ribosomal protein L37a, [RH, Score=132, Expect=7e-42]} {Smed: dd_Smed_v6_140_0_1, dd_Smed_v6_140_0_1, [RH, Score=116, Expect=7e-36]} {RNA1509_1173, RNA1509_2074, RNA1509_4197} {RNA1310_72999.1, RNA1509_1173, RNA1509_2074, RNA1509_4197} {RNA1509_1173, RNA1509_2074, RNA1509_4197, RNA815_37485.1}

Mlig455_052835 {REF} {Length: 464} {TRANSSPLICED} {Pfam: Ribosomal L37ae protein family [PF01780.21, score=134.9]; C1 domain [PF03107.18, score=19.3]} {Human: ENSG00000197756, RPL37A, ribosomal protein L37a, [RH, Score=139, Expect=3e-44]} {Mouse: ENSMUSG00000046330, Rpl37a, ribosomal protein L37a, [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0261608, RpL37A, Ribosomal protein L37A, [RH, Score=140, Expect=7e-45]} {Celegans: WBGene00004456, rpl-43, 60S ribosomal protein L37a, [RH, Score=132, Expect=7e-42]} {Smed: dd_Smed_v6_140_0_1, dd_Smed_v6_140_0_1, [RH, Score=116, Expect=7e-36]} {RNA1509_4197} {RNA1310_72999.2} {RNA815_37485.2}