Data search
Results for MligTC455_27395
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27395 | 102 | 2.12 | Mlig455_003180 | Neo: - Age: - |
Mlig455_003180 {REF} {Length: 2710} {Pfam: ZIP Zinc transporter [PF02535.24, score=35.0]} {RNA1509_23366, RNA1509_41727} {RNA1310_10185.1, RNA1509_41727} {RNA1509_41727, RNA815_4654.1} |
Cumulative graph for MligTC455_27395
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.776 | 2.104 | 0.63706 | 1.00000 | |
| RegionR2 | 0.267 | 2.104 | 0.78652 | 1.00000 | |
| RegionR3 | 0.684 | 2.104 | 0.49899 | 0.99420 | |
| RegionR4 | 1.01 | 2.104 | 0.42356 | 0.75162 | |
| RegionR5 | 0.946 | 2.104 | 0.28449 | 0.61418 | |
| RegionR6 | 0.121 | 2.104 | 0.82501 | 1.00000 | |
| RegionR7 | -0.353 | 2.104 | 0.94564 | 1.00000 | |
| RegionR8 | 0.101 | 2.104 | 0.85095 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.062 | 2.104 | 0.99991 | 1.00000 | |
| RegenerationR2 | 0.625 | 2.104 | 0.33892 | 0.77412 | |
| RegenerationR3 | 0.035 | 2.104 | 0.97634 | 1.00000 | |
| RegenerationR4 | -0.085 | 2.104 | 0.89920 | 1.00000 | |
| RegenerationR5 | 0.306 | 2.104 | 0.65189 | 0.93305 | |
| RegenerationR6 | 0.29 | 2.104 | 0.72922 | 0.94081 | |
| RegenerationBL | 0.98 | 2.104 | 0.43664 | 0.80457 | |
| RegenerationTP | -4.954 | 2.104 | 0.03408 | 0.30793 |
Genes with expression patterns similar to MligTC455_27395
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27395 | 102 | 2.12 | Mlig455_003180 | Neo: - Age: - |
5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_003180 {REF} {Length: 2710} {Pfam: ZIP Zinc transporter [PF02535.24, score=35.0]} {RNA1509_23366, RNA1509_41727} {RNA1310_10185.1, RNA1509_41727} {RNA1509_41727, RNA815_4654.1} | |
| 2. | MligTC455_39623 | 225 | 4.68 | Mlig455_061229 | Neo: - Age: logFC(26M/2M)=0.622 |
NRDE2 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_061229 {REF} {Length: 4599} {TRANSSPLICED} {Pfam: NRDE-2, necessary for RNA interference [PF08424.12, score=144.4]} {Human: ENSG00000119720, NRDE2, NRDE-2, necessary for RNA interference, domain containing, [RH, Score=134, Expect=9e-32]} {Mouse: ENSMUSG00000021179, Nrde2, nrde-2 necessary for RNA interference, domain containing, [RH, Score=124, Expect=5e-29]} {Smed: dd_Smed_v6_12142_0_1, dd_Smed_v6_12142_0_1, [RH, Score=102, Expect=3e-22]} {RNA1509_37760} {RNA1310_3668.2} {RNA815_2487.1} |
| 3. | MligTC455_46657 | 38 | 0.78 | Mlig455_012068 | Neo: - Age: - |
TPCN2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_012068 {REF} {Length: 3085} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=73.6]} {Human: ENSG00000162341, TPCN2, two pore segment channel 2, [Score=74.3, Expect=4e-14]} {Mouse: ENSMUSG00000048677, Tpcn2, two pore segment channel 2, [Score=77.0, Expect=3e-15]} {Smed: dd_Smed_v6_8333_0_1, dd_Smed_v6_8333_0_1, [Score=95.5, Expect=1e-21]} {RNA1509_51248} {RNA1310_6971.1} {RNA815_23671} |
Berezikov Lab - 2020-2021 © ERIBA