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Results for MligTC455_27399

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27399 17875 372.40 Mlig455_003088, Mlig455_043347

Neo: -

Age: Down-Up-Up

 EEF1D

Mlig455_003088 {REF} {Length: 2386} {TRANSSPLICED} {RNA1509_52913} {RNA1310_17862.1} {RNA815_48686}

Mlig455_043347 {REF} {Length: 1064} {TRANSSPLICED} {Pfam: EF-1 guanine nucleotide exchange domain [PF00736.21, score=120.8]; Eukaryotic elongation factor 1 beta central acidic region [PF10587.11, score=51.7]} {Human: ENSG00000273594, EEF1D, eukaryotic translation elongation factor 1 delta, [Score=222, Expect=4e-72]; ENSG00000104529, EEF1D, eukaryotic translation elongation factor 1 delta, [Score=222, Expect=4e-72]} {Mouse: ENSMUSG00000055762, Eef1d, eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein), [RH, Score=224, Expect=1e-72]} {Dmel: FBgn0032198, eEF1delta, eukaryotic translation elongation factor 1 delta, [Score=177, Expect=1e-54]} {Celegans: WBGene00018846, eef-1B.1, Probable elongation factor 1-beta/1-delta 1, [Score=152, Expect=1e-45]} {Smed: dd_Smed_v6_206_0_1, dd_Smed_v6_206_0_1, [Score=218, Expect=2e-71]} {RNA1509_9313} {RNA1310_32194.1} {RNA815_15251}

Cumulative graph for MligTC455_27399

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.817 8.62 0.01614 0.35766
RegionR2 -0.394 8.62 0.12067 0.43010
RegionR3 0.223 8.62 0.30463 0.84594
RegionR4 0.408 8.62 0.08586 0.27762
RegionR5 0.268 8.62 0.20027 0.49077
RegionR6 0.249 8.62 0.24634 0.83183
RegionR7 0.574 8.62 0.00610 0.12553
RegionR8 -0.51 8.62 0.04153 0.40025

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.577 8.62 0.18357 0.92415
RegenerationR2 0.104 8.62 0.70414 0.95780
RegenerationR3 -0.079 8.62 0.77659 0.97395
RegenerationR4 -0.039 8.62 0.89191 1.00000
RegenerationR5 -0.357 8.62 0.19461 0.62645
RegenerationR6 -0.16 8.62 0.56588 0.84886
RegenerationBL -0.45 8.62 0.07179 0.31222
RegenerationTP -0.32 8.62 0.23076 0.67575


Genes with expression patterns similar to MligTC455_27399

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27399 17875 372.4 Mlig455_003088, Mlig455_043347

Neo: -

Age: Down-Up-Up

 EEF1D 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_003088 {REF} {Length: 2386} {TRANSSPLICED} {RNA1509_52913} {RNA1310_17862.1} {RNA815_48686}

Mlig455_043347 {REF} {Length: 1064} {TRANSSPLICED} {Pfam: EF-1 guanine nucleotide exchange domain [PF00736.21, score=120.8]; Eukaryotic elongation factor 1 beta central acidic region [PF10587.11, score=51.7]} {Human: ENSG00000273594, EEF1D, eukaryotic translation elongation factor 1 delta, [Score=222, Expect=4e-72]; ENSG00000104529, EEF1D, eukaryotic translation elongation factor 1 delta, [Score=222, Expect=4e-72]} {Mouse: ENSMUSG00000055762, Eef1d, eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein), [RH, Score=224, Expect=1e-72]} {Dmel: FBgn0032198, eEF1delta, eukaryotic translation elongation factor 1 delta, [Score=177, Expect=1e-54]} {Celegans: WBGene00018846, eef-1B.1, Probable elongation factor 1-beta/1-delta 1, [Score=152, Expect=1e-45]} {Smed: dd_Smed_v6_206_0_1, dd_Smed_v6_206_0_1, [Score=218, Expect=2e-71]} {RNA1509_9313} {RNA1310_32194.1} {RNA815_15251}
2. MligTC455_51651 791 16.47 Mlig455_040153

Neo: -

Age: Up-Down-Down

 0.971 - - - - 0.971 - Mlig455_040153 {REF} {Length: 2069} {RNA1509_18432, RNA1509_31576} {RNA1310_54743, RNA1509_18432, RNA1509_31576} {RNA1509_18432, RNA1509_31576, RNA815_30657}
3. MligTC455_21180 3164 65.93 Mlig455_035687, Mlig455_035783

Neo: -

Age: -

 RAP2B 0.959 - - - - 0.959 -

Mlig455_035687 {REF} {Length: 4874} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=179.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=76.5]; ADP-ribosylation factor family [PF00025.23, score=39.2]; RsgA GTPase [PF03193.18, score=24.1]; 50S ribosome-binding GTPase [PF01926.25, score=23.9]} {Human: ENSG00000181467, RAP2B, RAP2B, member of RAS oncogene family, [Score=211, Expect=6e-70]; ENSG00000116473, RAP1A, RAP1A, member of RAS oncogene family, [Score=210, Expect=2e-69]; ENSG00000127314, RAP1B, RAP1B, member of RAS oncogene family, [Score=210, Expect=2e-69]; ENSG00000123728, RAP2C, RAP2C, member of RAS oncogene family, [Score=201, Expect=6e-66]} {Mouse: ENSMUSG00000036894, Rap2b, RAP2B, member of RAS oncogene family, [Score=211, Expect=4e-70]; ENSMUSG00000052681, Rap1b, RAS related protein 1b, [Score=210, Expect=1e-69]; ENSMUSG00000068798, Rap1a, RAS-related protein 1a, [Score=210, Expect=6e-70]; ENSMUSG00000051615, Rap2a, RAS related protein 2a, [Score=206, Expect=6e-68]; ENSMUSG00000050029, Rap2c, RAP2C, member of RAS oncogene family, [Score=201, Expect=4e-66]} {Dmel: FBgn0283666, Rap2l, Ras-associated protein 2-like, [RH, Score=215, Expect=8e-72]} {Celegans: WBGene00004308, rap-2, RAP homolog (Vertebrate Rap GTPase family), [Score=218, Expect=4e-73]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [Score=206, Expect=3e-68]} {RNA1509_23400, RNA1509_59068, RNA1509_8286} {RNA1310_17134, RNA1509_23400, RNA1509_59068, RNA1509_8286} {RNA1509_23400, RNA1509_59068, RNA1509_8286, RNA815_20999.2}

Mlig455_035783 {REF} {Length: 4667} {Pfam: Ras family [PF00071.24, score=179.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=76.6]; ADP-ribosylation factor family [PF00025.23, score=38.0]; 50S ribosome-binding GTPase [PF01926.25, score=24.1]; RsgA GTPase [PF03193.18, score=24.0]} {Human: ENSG00000181467, RAP2B, RAP2B, member of RAS oncogene family, [Score=211, Expect=4e-70]; ENSG00000116473, RAP1A, RAP1A, member of RAS oncogene family, [Score=210, Expect=1e-69]; ENSG00000127314, RAP1B, RAP1B, member of RAS oncogene family, [Score=210, Expect=1e-69]; ENSG00000123728, RAP2C, RAP2C, member of RAS oncogene family, [Score=201, Expect=6e-66]} {Mouse: ENSMUSG00000036894, Rap2b, RAP2B, member of RAS oncogene family, [Score=211, Expect=3e-70]; ENSMUSG00000068798, Rap1a, RAS-related protein 1a, [Score=210, Expect=5e-70]; ENSMUSG00000052681, Rap1b, RAS related protein 1b, [Score=210, Expect=9e-70]; ENSMUSG00000051615, Rap2a, RAS related protein 2a, [Score=206, Expect=4e-68]; ENSMUSG00000050029, Rap2c, RAP2C, member of RAS oncogene family, [Score=201, Expect=4e-66]} {Dmel: FBgn0283666, Rap2l, Ras-associated protein 2-like, [RH, Score=216, Expect=3e-72]} {Celegans: WBGene00004308, rap-2, RAP homolog (Vertebrate Rap GTPase family), [Score=219, Expect=1e-73]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [Score=206, Expect=2e-68]} {RNA1509_32158, RNA1509_59068} {RNA1310_17134, RNA1509_32158} {RNA1509_32158, RNA815_20999.1}
4. MligTC455_36605 27369 570.18 Mlig455_009517

Neo: Int S/G2/M

Age: Down-Down-Up, logFC(26M/2M)=0.219

 RPS4X 0.952 - - - - 0.952 - Mlig455_009517 {REF} {Length: 1028} {TRANSSPLICED} {Pfam: Ribosomal family S4e [PF00900.22, score=115.2]; 40S ribosomal protein S4 C-terminus [PF16121.7, score=93.2]; RS4NT (NUC023) domain [PF08071.14, score=66.7]; KOW motif [PF00467.31, score=29.3]} {Human: ENSG00000198034, RPS4X, ribosomal protein S4 X-linked, [RH, Score=399, Expect=8e-142]; ENSG00000129824, RPS4Y1, ribosomal protein S4 Y-linked 1, [RH, Score=388, Expect=2e-137]} {Mouse: ENSMUSG00000031320, Rps4x, ribosomal protein S4, X-linked, [RH, Score=399, Expect=5e-142]} {Dmel: FBgn0011284, RpS4, Ribosomal protein S4, [RH, Score=372, Expect=3e-131]} {Celegans: WBGene00004473, rps-4, 40S ribosomal protein S4, [RH, Score=342, Expect=1e-119]} {Smed: dd_Smed_v6_82_0_1, dd_Smed_v6_82_0_1, [RH, Score=333, Expect=2e-116]} {RNA1509_1299, RNA1509_5828} {RNA1310_34304, RNA1509_1299, RNA1509_5828} {RNA1509_1299, RNA1509_5828, RNA815_15889.1}

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