Data search
Results for MligTC455_27417
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27417 | 15818 | 329.55 | Mlig455_005613 | Neo: - Age: Down-Up-Down |
Mlig455_005613 {REF} {Length: 1320} {RNA1509_1344, RNA1509_1497, RNA1509_4332, RNA1509_826} {RNA1310_46800, RNA1509_1344, RNA1509_1497, RNA1509_4332, RNA1509_826} {RNA1509_1344, RNA1509_1497, RNA1509_4332, RNA1509_826, RNA815_22210} |
Cumulative graph for MligTC455_27417
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.993 | 8.476 | 0.00560 | 0.23331 | |
| RegionR2 | -0.047 | 8.476 | 0.85589 | 1.00000 | |
| RegionR3 | 0.306 | 8.476 | 0.17021 | 0.69571 | |
| RegionR4 | 0.285 | 8.476 | 0.26035 | 0.56276 | |
| RegionR5 | -0.026 | 8.476 | 0.90638 | 1.00000 | |
| RegionR6 | 0.019 | 8.476 | 0.93193 | 1.00000 | |
| RegionR7 | 0.464 | 8.476 | 0.03356 | 0.34892 | |
| RegionR8 | -0.009 | 8.476 | 0.97274 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.214 | 8.476 | 0.64146 | 1.00000 | |
| RegenerationR2 | -0.887 | 8.476 | 0.00216 | 0.07025 | |
| RegenerationR3 | -1.026 | 8.476 | 0.00049 | 0.03216 | |
| RegenerationR4 | -0.861 | 8.476 | 0.00442 | 0.09205 | |
| RegenerationR5 | -0.759 | 8.476 | 0.00907 | 0.17182 | |
| RegenerationR6 | -0.766 | 8.476 | 0.00955 | 0.12008 | |
| RegenerationBL | -0.736 | 8.476 | 0.00561 | 0.07084 | |
| RegenerationTP | -0.576 | 8.476 | 0.04090 | 0.33623 |
Genes with expression patterns similar to MligTC455_27417
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27417 | 15818 | 329.55 | Mlig455_005613 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_005613 {REF} {Length: 1320} {RNA1509_1344, RNA1509_1497, RNA1509_4332, RNA1509_826} {RNA1310_46800, RNA1509_1344, RNA1509_1497, RNA1509_4332, RNA1509_826} {RNA1509_1344, RNA1509_1497, RNA1509_4332, RNA1509_826, RNA815_22210} | |
| 2. | MligTC455_27418 | 16013 | 333.6 | Mlig455_014435 | Neo: - Age: Down-Down-Up |
RPS12 | 5.957 | 0.996 | 0.998 | 0.996 | 0.991 | 0.993 | 0.983 | Mlig455_014435 {REF} {Length: 717} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=98.6]} {Human: ENSG00000112306, RPS12, ribosomal protein S12, [RH, Score=169, Expect=6e-55]} {Mouse: ENSMUSG00000061983, Rps12, ribosomal protein S12, [RH, Score=169, Expect=4e-55]; ENSMUSG00000067038, Rps12-ps3, ribosomal protein S12, pseudogene 3, [RH, Score=169, Expect=4e-55]} {Dmel: FBgn0260441, RpS12, Ribosomal protein S12, [RH, Score=147, Expect=2e-46]} {Celegans: WBGene00004481, rps-12, 40S ribosomal protein S12, [RH, Score=134, Expect=3e-41]} {Smed: dd_Smed_v6_94979_0_1, dd_Smed_v6_94979_0_1, [RH, Score=159, Expect=1e-51]} {RNA1509_1344} {RNA1310_46800} {RNA815_22210} |
| 3. | MligTC455_27419 | 16496 | 343.66 | Mlig455_070185 | Neo: - Age: Up-Down-Up |
RPS12 | 5.944 | 0.997 | 0.994 | 0.992 | 0.975 | 0.999 | 0.987 | Mlig455_070185 {REF} {Length: 712} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=98.6]} {Human: ENSG00000112306, RPS12, ribosomal protein S12, [RH, Score=169, Expect=6e-55]} {Mouse: ENSMUSG00000061983, Rps12, ribosomal protein S12, [RH, Score=169, Expect=4e-55]; ENSMUSG00000067038, Rps12-ps3, ribosomal protein S12, pseudogene 3, [RH, Score=169, Expect=4e-55]} {Dmel: FBgn0260441, RpS12, Ribosomal protein S12, [RH, Score=147, Expect=2e-46]} {Celegans: WBGene00004481, rps-12, 40S ribosomal protein S12, [RH, Score=134, Expect=3e-41]} {Smed: dd_Smed_v6_94979_0_1, dd_Smed_v6_94979_0_1, [RH, Score=159, Expect=1e-51]} {RNA1509_4332} {RNA1310_46800} {RNA815_22210} |
| 4. | MligTC455_27416 | 16414 | 341.96 | Mlig455_014443 | Neo: - Age: Down-Down-Up |
RPS12 | 5.89 | 0.995 | 0.997 | 0.990 | 0.988 | 0.996 | 0.924 | Mlig455_014443 {REF} {Length: 719} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=98.6]} {Human: ENSG00000112306, RPS12, ribosomal protein S12, [RH, Score=169, Expect=6e-55]} {Mouse: ENSMUSG00000061983, Rps12, ribosomal protein S12, [RH, Score=169, Expect=4e-55]; ENSMUSG00000067038, Rps12-ps3, ribosomal protein S12, pseudogene 3, [RH, Score=169, Expect=4e-55]} {Dmel: FBgn0260441, RpS12, Ribosomal protein S12, [RH, Score=147, Expect=2e-46]} {Celegans: WBGene00004481, rps-12, 40S ribosomal protein S12, [RH, Score=134, Expect=3e-41]} {Smed: dd_Smed_v6_94979_0_1, dd_Smed_v6_94979_0_1, [RH, Score=159, Expect=1e-51]} {RNA1509_826} {RNA1310_46800} {RNA815_22210} |
Berezikov Lab - 2020-2021 © ERIBA