Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_27465 | 95 | 1.98 | Mlig455_013905 | Neo: - Age: - |
Mlig455_013905 {REF} {Length: 3093} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=123.9]; Family of unknown function (DUF5641) [PF18701.3, score=26.3]; Aspartyl protease [PF13650.8, score=24.4]} {RNA1509_13580} {RNA1310_166} {RNA815_47560} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | 2.574 | 1.833 | 0.52217 | 1.00000 | |
RegionR2 | 0.814 | 1.833 | 0.53678 | 0.90628 | |
RegionR3 | -1.511 | 1.833 | 0.99751 | 1.00000 | |
RegionR4 | 1.116 | 1.833 | 0.37314 | 0.69663 | |
RegionR5 | -0.922 | 1.833 | 0.98278 | 1.00000 | |
RegionR6 | -0.596 | 1.833 | 0.95477 | 1.00000 | |
RegionR7 | 1.268 | 1.833 | 0.41767 | 1.00000 | |
RegionR8 | -2.742 | 1.833 | 0.48182 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -1.262 | 1.833 | 0.77171 | 1.00000 | |
RegenerationR2 | 1.195 | 1.833 | 0.16428 | 0.60191 | |
RegenerationR3 | 2.169 | 1.833 | 0.11183 | 0.52493 | |
RegenerationR4 | 0.417 | 1.833 | 0.74585 | 0.96971 | |
RegenerationR5 | 0.845 | 1.833 | 0.45088 | 0.83106 | |
RegenerationR6 | 1.456 | 1.833 | 0.24845 | 0.59674 | |
RegenerationBL | 2.289 | 1.833 | 0.17262 | 0.49786 | |
RegenerationTP | 2.229 | 1.833 | 0.32189 | 0.76633 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_27465 | 95 | 1.98 | Mlig455_013905 | Neo: - Age: - |
4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_013905 {REF} {Length: 3093} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=123.9]; Family of unknown function (DUF5641) [PF18701.3, score=26.3]; Aspartyl protease [PF13650.8, score=24.4]} {RNA1509_13580} {RNA1310_166} {RNA815_47560} | |
2. | MligTC455_38810 | 655 | 13.64 | Mlig455_021157, Mlig455_021360, Mlig455_021587 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.289 Region-enriched R2: 2.927/0.00001 |
NELL2 | 2.631 | - | - | - | 0.861 | 0.971 | 0.799 | Mlig455_021157 {REF} {Length: 4103} {Smed: dd_Smed_v6_13075_0_2, dd_Smed_v6_13075_0_2, [Score=57.8, Expect=4e-08]} {RNA1509_22586} {RNA1310_1033} {RNA815_17785} Mlig455_021360 {REF} {Length: 7457} {Pfam: Calcium-binding EGF domain [PF07645.17, score=34.6]; EGF domain [PF12947.9, score=33.5]; TNFR/NGFR cysteine-rich region [PF00020.20, score=27.7]; Complement Clr-like EGF-like [PF12662.9, score=20.4]} {Human: ENSG00000184613, NELL2, neural EGFL like 2, [Score=63.5, Expect=4e-09]; ENSG00000168743, NPNT, nephronectin, [Score=62.4, Expect=6e-09]; ENSG00000165973, NELL1, neural EGFL like 1, [Score=60.8, Expect=3e-08]} {Mouse: ENSMUSG00000000402, Egfl6, EGF-like-domain, multiple 6, [Score=63.2, Expect=3e-09]; ENSMUSG00000022454, Nell2, NEL-like 2, [Score=63.2, Expect=3e-09]; ENSMUSG00000002885, Adgre5, adhesion G protein-coupled receptor E5, [Score=62.0, Expect=6e-09]; ENSMUSG00000040998, Npnt, nephronectin, [Score=62.0, Expect=5e-09]} {Dmel: FBgn0035798, frac, faulty attraction, [Score=54.7, Expect=1e-06]} {Celegans: WBGene00022816, fbn-1, FBN-1A.1; FiBrilliN homolog, [Score=68.9, Expect=4e-11]} {Smed: dd_Smed_v6_13075_0_1, dd_Smed_v6_13075_0_1, [RH, Score=146, Expect=9e-35]} {RNA1509_49441} {RNA1310_699, RNA1509_49441} {RNA1509_49441, RNA815_6324} Mlig455_021587 {REF} {Length: 2362} {RNA1509_22586} {RNA1310_1033} {RNA815_22832} |
3. | MligTC455_36729 | 109 | 2.26 | Mlig455_031568 | Neo: - Age: - Region-enriched R2: 4.085/0.04774 |
1.849 | - | - | - | 0.885 | 0.964 | - | Mlig455_031568 {REF} {Length: 4709} {RNA1310_20703.1} {RNA815_12377} | |
4. | MligTC455_33044 | 734 | 15.3 | Mlig455_037188, Mlig455_052339 | Neo: - Age: logFC(26M/2M)=-0.337 |
RPGRIP1L | 1.814 | - | - | - | 0.971 | - | 0.843 | Mlig455_037188 {REF} {Length: 4884} {TRANSSPLICED} {Pfam: First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=146.0]; Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=71.1]; C2 domain [PF00168.32, score=28.5]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=369, Expect=5e-110]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=355, Expect=2e-105]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=337, Expect=1e-98]} {RNA1509_2695} {RNA1310_1383} {RNA815_371} Mlig455_052339 {REF} {Length: 4951} {TRANSSPLICED} {Pfam: First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=149.3]; Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=70.2]; C2 domain [PF00168.32, score=27.9]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [RH, Score=514, Expect=3e-159]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [RH, Score=499, Expect=7e-154]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [RH, Score=511, Expect=5e-158]} {RNA1509_2695, RNA1509_47268} {RNA1310_1383, RNA1509_2695, RNA1509_47268} {RNA1509_2695, RNA1509_47268, RNA815_371} |
5. | MligTC455_18761 | 192 | 3.99 | Mlig455_047389 | Neo: - Age: logFC(26M/2M)=-0.344 Region-enriched R4: 3.398/0.00008 Regeneration-downregulated R4: -2.876 Regeneration-depleted R4: -2.876 |
1.782 | - | - | - | 0.957 | 0.825 | - | Mlig455_047389 {REF} {Length: 3935} {Pfam: Mab-21 protein [PF03281.16, score=31.7]} {RNA1509_24588} {RNA1310_3361, RNA1509_24588} {RNA1509_24588, RNA815_680.1} | |
6. | MligTC455_52678 | 24 | 0.5 | Mlig455_052449 | Neo: - Age: - |
1.7 | - | - | - | 0.747 | 0.953 | - | Mlig455_052449 {REF} {Length: 2321} {RNA1509_25982} {RNA1310_586.2} {RNA815_3003} | |
7. | MligTC455_40740 | 195 | 4.07 | Mlig455_001841 | Neo: - Age: Down-Up-Up |
0.984 | - | - | - | - | - | 0.984 | Mlig455_001841 {REF} {Length: 2164} {RNA1509_17197, RNA1509_47322} {RNA1310_23515, RNA1509_17197, RNA1509_47322} {RNA1509_17197, RNA1509_47322, RNA815_9818} | |
8. | MligTC455_19037 | 10 | 0.21 | Mlig455_062313 | Neo: - Age: - |
0.975 | - | - | - | - | 0.975 | - | Mlig455_062313 {REF} {Length: 1180} {NoTransDecoderORF} {RNA1509_20257} {RNA1310_115865} {RNA815_5444.1} | |
9. | MligTC455_12795 | 29 | 0.6 | Mlig455_018625 | Neo: - Age: - |
0.967 | - | - | - | 0.967 | - | - | Mlig455_018625 {REF} {Length: 2962} {NoTransDecoderORF} {RNA1509_31653} {RNA1310_61132.1} {RNA815_20852} | |
10. | MligTC455_33987 | 62 | 1.3 | Mlig455_051681 | Neo: - Age: - |
0.967 | - | - | - | 0.967 | - | - | Mlig455_051681 {REF} {Length: 4643} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=54.3]} {RNA1509_11292} {RNA1310_7966.1} {RNA815_776.1} | |
11. | MligTC455_01747 | 14 | 0.28 | Mlig455_055068 | Neo: - Age: - |
0.965 | - | - | - | 0.965 | - | - | Mlig455_055068 {REF} {Length: 644} {NoTransDecoderORF} | |
12. | MligTC455_36212 | 118 | 2.46 | Mlig455_000072, Mlig455_049028 | Neo: - Age: Up-Down-Down |
0.965 | - | - | - | - | 0.965 | - | Mlig455_000072 {REF} {Length: 2472} {RNA1509_44312, RNA1509_55442} {RNA1310_56084.1, RNA1509_44312, RNA1509_55442} {RNA1509_44312, RNA1509_55442, RNA815_65000} Mlig455_049028 {REF} {Length: 782} {NoTransDecoderORF} {RNA1509_44312} {RNA1310_69582} |
|
13. | MligTC455_07543 | 35 | 0.73 | Mlig455_028058, Mlig455_028292 | Neo: - Age: - |
0.963 | - | - | - | 0.963 | - | - | Mlig455_028058 {REF} {Length: 1890} {RNA1310_62356.1} {RNA815_46966} Mlig455_028292 {REF} {Length: 2394} {RNA1310_62356.1} {RNA815_46966} |
|
14. | MligTC455_46555 | 37 | 0.76 | Mlig455_038390 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_038390 {REF} {Length: 1886} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=60.6]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=94.4, Expect=7e-24]} {RNA1310_40614} {RNA815_32173} | |
15. | MligTC455_48716 | 140 | 2.92 | Mlig455_015121 | Neo: - |
0.96 | - | - | - | 0.960 | - | - | Mlig455_015121 {REF} {Length: 1682} {RNA1509_39666} {RNA1310_16691.1} {RNA815_18464} | |
16. | MligTC455_47147 | 158 | 3.29 | Mlig455_054044 | Neo: - Age: - Region-enriched R4: 4.389/0.00352 |
0.958 | - | - | - | - | 0.958 | - | Mlig455_054044 {REF} {Length: 1169} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52981} {RNA1310_47684.1} {RNA815_28043} | |
17. | MligTC455_25383 | 64 | 1.34 | Mlig455_017641 | Neo: - Age: Down-Up-Down |
SF3B3 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_017641 {REF} {Length: 5551} {Pfam: CPSF A subunit region [PF03178.17, score=194.2]} {Human: ENSG00000189091, SF3B3, splicing factor 3b subunit 3, [Score=749, Expect=0.0]} {Mouse: ENSMUSG00000033732, Sf3b3, splicing factor 3b, subunit 3, [Score=750, Expect=0.0]} {Dmel: FBgn0035162, Sf3b3, Splicing factor 3b subunit 3, [Score=667, Expect=0.0]} {Celegans: WBGene00019323, teg-4, Tumorous Enhancer of Glp-1(Gf), [Score=509, Expect=1e-163]} {Smed: dd_Smed_v6_4241_0_1, dd_Smed_v6_4241_0_1, [Score=650, Expect=0.0]} {RNA1509_47059, RNA1509_49748, RNA1509_5382} {RNA1310_2503, RNA1509_47059, RNA1509_49748} {RNA1509_47059, RNA1509_49748, RNA815_4779} |
18. | MligTC455_45161 | 29 | 0.6 | Mlig455_027613 | Neo: Irradiation Age: - |
WSCD2 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_027613 {REF} {Length: 1427} {Pfam: WSC domain [PF01822.21, score=56.9]; PAN domain [PF00024.28, score=21.6]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=54.3, Expect=4e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=56.6, Expect=4e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=61.2, Expect=8e-11]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=52.8, Expect=4e-08]} {RNA1509_29094} {RNA1310_36326} {RNA815_27950.1} |
19. | MligTC455_25810 | 160 | 3.34 | Mlig455_007369 | Neo: - Age: logFC(26M/2M)=-0.475 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_007369 {REF} {Length: 1460} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=112.7]; Glycosyl transferase family 2 [PF13704.8, score=24.3]} {Celegans: WBGene00012941, Y47D3B.4, [Score=53.1, Expect=3e-07]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=197, Expect=4e-58]} {RNA1310_16379.1} {RNA815_14941.1} | |
20. | MligTC455_35738 | 32 | 0.66 | Mlig455_043312 | Neo: - Age: - Region-enriched R4: 7.119/0.01931 |
ADGRL2 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_043312 {REF} {Length: 3897} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=111.8]; Myc amino-terminal region [PF01056.20, score=20.2]} {Human: ENSG00000117114, ADGRL2, adhesion G protein-coupled receptor L2, [RH, Score=138, Expect=2e-33]} {Mouse: ENSMUSG00000028184, Adgrl2, adhesion G protein-coupled receptor L2, [RH, Score=139, Expect=4e-34]; ENSMUSG00000013033, Adgrl1, adhesion G protein-coupled receptor L1, [RH, Score=136, Expect=3e-33]} {Celegans: WBGene00002252, lat-2, Latrophilin-like protein LAT-2, [Score=118, Expect=1e-27]} {Smed: dd_Smed_v6_16446_0_2, dd_Smed_v6_16446_0_2, [Score=199, Expect=4e-55]} {RNA1509_25495} {RNA1310_3070} {RNA815_2153} |
21. | MligTC455_43452 | 29 | 0.6 | Mlig455_013155 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_013155 {REF} {Length: 920} {Pfam: Lectin C-type domain [PF00059.23, score=25.4]} {Smed: dd_Smed_v6_42798_0_1, dd_Smed_v6_42798_0_1, [Score=57.0, Expect=8e-10]} {RNA1509_20946} {RNA1310_57972} {RNA815_4785.4} | |
22. | MligTC455_22635 | 180 | 3.75 | Mlig455_047759 | Neo: - Age: Down-Up-Down |
CCDC92 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_047759 {REF} {Length: 1811} {TRANSSPLICED} {Pfam: Coiled-coil domain of unknown function [PF14916.8, score=67.8]} {Human: ENSG00000275035, CCDC92, coiled-coil domain containing 92, [RH, Score=54.3, Expect=7e-08]; ENSG00000119242, CCDC92, coiled-coil domain containing 92, [RH, Score=54.3, Expect=7e-08]} {Mouse: ENSMUSG00000037979, Ccdc92, coiled-coil domain containing 92, [RH, Score=52.8, Expect=1e-07]} {Smed: dd_Smed_v6_15609_0_1, dd_Smed_v6_15609_0_1, [RH, Score=62.8, Expect=3e-11]} {RNA1509_1885} {RNA1310_45567.1} {RNA815_31004} |
23. | MligTC455_04274 | 93 | 1.94 | Mlig455_016312 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_016312 {REF} {Length: 2266} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=33.7]} {RNA1509_7158} {RNA1310_4079} {RNA815_282.1} | |
24. | MligTC455_25489 | 334 | 6.97 | Mlig455_016250, Mlig455_054237 | Neo: - Age: - Region-enriched R2: 2.945/0.04675 |
TAF9 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_016250 {REF} {Length: 6026} {TRANSSPLICED} {RNA1509_6307} {RNA1310_717} {RNA815_357} Mlig455_054237 {REF} {Length: 3764} {TRANSSPLICED} {Pfam: Transcription initiation factor IID, 31kD subunit [PF02291.17, score=126.4]; CENP-S protein [PF15630.8, score=29.2]; Bromodomain associated [PF07524.15, score=22.4]; Centromere kinetochore component CENP-T histone fold [PF15511.8, score=21.2]} {Human: ENSG00000276463, TAF9, TATA-box binding protein associated factor 9, [RH, Score=134, Expect=2e-34]; ENSG00000273841, TAF9, TATA-box binding protein associated factor 9, [RH, Score=134, Expect=2e-34]} {Mouse: ENSMUSG00000078941, Ak6, adenylate kinase 6, [RH, Score=133, Expect=1e-34]; ENSMUSG00000052293, Taf9, TATA-box binding protein associated factor 9, [RH, Score=133, Expect=1e-34]; ENSMUSG00000047242, Taf9b, TATA-box binding protein associated factor 9B, [RH, Score=130, Expect=1e-33]} {Dmel: FBgn0000617, e(y)1, enhancer of yellow 1, [RH, Score=125, Expect=2e-31]} {RNA1509_41643, RNA1509_6307} {RNA1310_717, RNA1509_41643} {RNA1509_41643, RNA815_357} |
25. | MligTC455_43015 | 439 | 9.15 | Mlig455_014932, Mlig455_045193 | Neo: - Age: - Region-enriched R2: 2.397/0.00888 |
FBXW11, FBXW7 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_014932 {REF} {Length: 3850} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=81.7]; F-box-like [PF12937.9, score=41.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=33.2]; F-box domain [PF00646.35, score=24.3]} {Human: ENSG00000109670, FBXW7, F-box and WD repeat domain containing 7, [Score=129, Expect=3e-30]; ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [Score=128, Expect=3e-30]} {Mouse: ENSMUSG00000028086, Fbxw7, F-box and WD-40 domain protein 7, [Score=130, Expect=2e-30]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [Score=127, Expect=3e-30]} {Dmel: FBgn0041171, ago, archipelago, [Score=125, Expect=7e-29]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [Score=124, Expect=6e-29]} {Smed: dd_Smed_v6_14791_0_2, dd_Smed_v6_14791_0_2, [RH, Score=256, Expect=2e-72]} {RNA1509_22589} {RNA1310_4416} {RNA815_10874} Mlig455_045193 {REF} {Length: 3913} {Pfam: WD domain, G-beta repeat [PF00400.34, score=81.1]; F-box-like [PF12937.9, score=40.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=33.3]; F-box domain [PF00646.35, score=24.5]} {Human: ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [Score=129, Expect=2e-30]; ENSG00000109670, FBXW7, F-box and WD repeat domain containing 7, [Score=128, Expect=9e-30]} {Mouse: ENSMUSG00000028086, Fbxw7, F-box and WD-40 domain protein 7, [Score=129, Expect=4e-30]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [Score=128, Expect=2e-30]} {Dmel: FBgn0041171, ago, archipelago, [Score=125, Expect=9e-29]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [Score=124, Expect=4e-29]} {Smed: dd_Smed_v6_14791_0_2, dd_Smed_v6_14791_0_2, [RH, Score=256, Expect=8e-73]} {RNA1509_22589, RNA1509_51967} {RNA1310_4416, RNA1509_22589, RNA1509_51967} {RNA1509_22589, RNA1509_51967, RNA815_10874} |