TomoSeq data search

Data search

Results for MligTC455_27467

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27467

5

0.10

Mlig455_013623

Neo: -

Age: -

MAP3K19

Mlig455_013623 {REF} {Length: 4521} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=301.2]; Ankyrin repeats (3 copies) [PF12796.9, score=216.1]; Protein kinase domain [PF00069.27, score=186.4]; Ankyrin repeats (many copies) [PF13857.8, score=152.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=145.9]; Ankyrin repeat [PF13606.8, score=82.6]; Ankyrin repeat [PF00023.32, score=56.0]; CRISPR-associated protein [PF12469.10, score=44.8]; Fungal protein kinase [PF17667.3, score=27.3]; ABC1 atypical kinase-like domain [PF03109.18, score=26.9]; Ty5 Gag N-terminal region [PF17241.4, score=23.0]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=154, Expect=9e-39]; ENSG00000180815, MAP3K15, mitogen-activated protein kinase kinase kinase 15, [Score=147, Expect=4e-35]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=153, Expect=7e-39]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=130, Expect=6e-31]} {Celegans: WBGene00003144, max-2, Serine/threonine-protein kinase max-2, [Score=115, Expect=2e-28]} {Smed: dd_Smed_v6_2030_0_9, dd_Smed_v6_2030_0_9, [Score=130, Expect=3e-32]} {RNA1509_45037} {RNA1310_22200.1} {RNA815_5323.2}

Cumulative graph for MligTC455_27467

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_27467

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27467	5	0.1	Mlig455_013623	Neo: - Age: -	MAP3K19	1	-	-	-	-	1.000	-	Mlig455_013623 {REF} {Length: 4521} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=301.2]; Ankyrin repeats (3 copies) [PF12796.9, score=216.1]; Protein kinase domain [PF00069.27, score=186.4]; Ankyrin repeats (many copies) [PF13857.8, score=152.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=145.9]; Ankyrin repeat [PF13606.8, score=82.6]; Ankyrin repeat [PF00023.32, score=56.0]; CRISPR-associated protein [PF12469.10, score=44.8]; Fungal protein kinase [PF17667.3, score=27.3]; ABC1 atypical kinase-like domain [PF03109.18, score=26.9]; Ty5 Gag N-terminal region [PF17241.4, score=23.0]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=154, Expect=9e-39]; ENSG00000180815, MAP3K15, mitogen-activated protein kinase kinase kinase 15, [Score=147, Expect=4e-35]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=153, Expect=7e-39]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=130, Expect=6e-31]} {Celegans: WBGene00003144, max-2, Serine/threonine-protein kinase max-2, [Score=115, Expect=2e-28]} {Smed: dd_Smed_v6_2030_0_9, dd_Smed_v6_2030_0_9, [Score=130, Expect=3e-32]} {RNA1509_45037} {RNA1310_22200.1} {RNA815_5323.2}
2.	MligTC455_07448	149	3.1	Mlig455_008337	Neo: - Age: logFC(26M/2M)=0.836 Regeneration-downregulated R6: -5.322 Regeneration-depleted R6: -5.322	P4HB	0.982	-	-	-	-	0.982	-	Mlig455_008337 {REF} {Length: 2743} {Pfam: Thioredoxin [PF00085.22, score=188.0]; Thioredoxin-like domain [PF13848.8, score=134.3]; Thioredoxin-like domain [PF13098.8, score=56.7]; Thioredoxin-like [PF13899.8, score=48.1]; OST3 / OST6 family, transporter family [PF04756.15, score=40.2]; AhpC/TSA family [PF00578.23, score=37.4]; Thioredoxin-like [PF13905.8, score=37.3]; Calsequestrin [PF01216.19, score=31.5]; ERp29, N-terminal domain [PF07912.15, score=28.3]; Redoxin [PF08534.12, score=23.6]; Thioredoxin domain [PF13192.8, score=21.3]; F plasmid transfer operon protein [PF13728.8, score=20.8]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase subunit beta, [Score=496, Expect=3e-172]} {Mouse: ENSMUSG00000025130, P4hb, prolyl 4-hydroxylase, beta polypeptide, [Score=492, Expect=4e-171]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [Score=444, Expect=2e-152]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [Score=478, Expect=7e-166]} {Smed: dd_Smed_v6_250_0_1, dd_Smed_v6_250_0_1, [Score=514, Expect=3e-180]} {RNA1509_31469} {RNA1310_14305} {RNA815_2552.1}
3.	MligTC455_08591	42	0.87	Mlig455_020619	Neo: - Age: -	PHOX2B	0.98	-	-	-	-	0.980	-	Mlig455_020619 {REF} {Length: 1413} {Pfam: Homeodomain [PF00046.31, score=80.5]} {Human: ENSG00000109132, PHOX2B, paired like homeobox 2B, [RH, Score=135, Expect=3e-36]; ENSG00000165462, PHOX2A, paired like homeobox 2A, [RH, Score=129, Expect=2e-34]} {Mouse: ENSMUSG00000012520, Phox2b, paired-like homeobox 2b, [RH, Score=135, Expect=2e-36]; ENSMUSG00000007946, Phox2a, paired-like homeobox 2a, [RH, Score=129, Expect=1e-34]} {Dmel: FBgn0025334, PHDP, Putative homeodomain protein, [RH, Score=119, Expect=2e-31]} {Celegans: WBGene00000440, ceh-17, C. Elegans Homeobox; CEH-17, [RH, Score=132, Expect=2e-36]} {Smed: dd_Smed_v6_29211_0_1, dd_Smed_v6_29211_0_1, [RH, Score=146, Expect=2e-40]} {RNA1310_111052}
4.	MligTC455_32032	70	1.46	Mlig455_017979	Neo: - Age: -		0.974	-	-	-	-	0.974	-	Mlig455_017979 {REF} {Length: 3320} {Pfam: Rel homology DNA-binding domain [PF00554.24, score=59.1]} {RNA1509_44324} {RNA1310_37384} {RNA815_32175}
5.	MligTC455_15588	223	4.64	Mlig455_018016, Mlig455_018021	Neo: - Age: -		0.97	-	-	-	-	0.970	-	Mlig455_018016 {REF} {Length: 3621} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=57.1]} {Celegans: WBGene00007064, 2RSSE.1, [RH, Score=129, Expect=4e-33]} {Smed: dd_Smed_v6_6099_0_1, dd_Smed_v6_6099_0_1, [RH, Score=260, Expect=4e-79]} {RNA1509_47974, RNA1509_60122, RNA1509_9501} {RNA1310_8454, RNA1509_47974, RNA1509_60122} {RNA1509_47974, RNA1509_60122, RNA815_6408} Mlig455_018021 {REF} {Length: 2077} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=45.1, Expect=8e-06]} {RNA1509_9501} {RNA1310_8454} {RNA815_14573}
6.	MligTC455_31085	56	1.17	Mlig455_012955	Neo: - Age: - Region-enriched R4: 4.450/0.01398	ZFAND4	0.964	-	-	-	-	0.964	-	Mlig455_012955 {REF} {Length: 3260} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=53.8]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=25.1]; Ubiquitin-like domain [PF14560.8, score=19.5]} {Human: ENSG00000172671, ZFAND4, zinc finger AN1-type containing 4, [RH, Score=146, Expect=5e-39]} {Mouse: ENSMUSG00000042213, Zfand4, zinc finger, AN1-type domain 4, [RH, Score=150, Expect=2e-40]} {Dmel: FBgn0003941, RpL40, Ribosomal protein L40, [Score=64.3, Expect=1e-12]} {Celegans: WBGene00006728, ubq-2, Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40, [Score=62.0, Expect=7e-12]} {Smed: dd_Smed_v6_4992_0_1, dd_Smed_v6_4992_0_1, [RH, Score=141, Expect=1e-38]} {RNA1509_11475, RNA1509_27952} {RNA1310_28869, RNA1509_27952} {RNA1509_27952, RNA815_6580}
7.	MligTC455_49030	12	0.24	Mlig455_028225	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.839	SYT3	0.958	-	-	-	-	0.958	-	Mlig455_028225 {REF} {Length: 3004} {Pfam: C2 domain [PF00168.32, score=61.2]} {Human: ENSG00000213023, SYT3, synaptotagmin 3, [Score=75.9, Expect=2e-14]} {Mouse: ENSMUSG00000030731, Syt3, synaptotagmin III, [Score=74.7, Expect=4e-14]; ENSMUSG00000062542, Syt9, synaptotagmin IX, [Score=71.6, Expect=3e-13]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=59.3, Expect=2e-09]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [Score=59.7, Expect=1e-09]} {Smed: dd_Smed_v6_25279_0_1, dd_Smed_v6_25279_0_1, [Score=87.8, Expect=2e-19]} {RNA1310_53959} {RNA815_36451}
8.	MligTC455_10947	15	0.31	Mlig455_050032	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_050032 {REF} {Length: 309} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46344} {RNA1310_4333.2} {RNA815_13389}
9.	MligTC455_06407	25	0.52	Mlig455_055014	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_055014 {REF} {Length: 492} {NoTransDecoderORF}
10.	MligTC455_07653	93	1.94	Mlig455_005690	Neo: - Age: - Region-enriched R4: 3.056/0.03657		0.954	-	-	-	-	0.954	-	Mlig455_005690 {REF} {Length: 747} {NoTransDecoderORF} {RNA1509_20118} {RNA1310_60500} {RNA815_43456}

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