Data search
Results for MligTC455_27512
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27512 | 79 | 1.64 | Mlig455_027728 | Neo: - Age: - |
MAP3K4 | Mlig455_027728 {REF} {Length: 2991} {Pfam: Protein kinase domain [PF00069.27, score=167.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=120.5]; Ankyrin repeats (3 copies) [PF12796.9, score=78.1]; Ankyrin repeats (many copies) [PF13637.8, score=59.6]; Ankyrin repeat [PF13606.8, score=55.8]; Ankyrin repeats (many copies) [PF13857.8, score=46.1]; Ankyrin repeat [PF00023.32, score=44.4]; Fungal protein kinase [PF17667.3, score=27.5]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=130, Expect=2e-30]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=125, Expect=3e-29]; ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=120, Expect=2e-27]; ENSMUSG00000031303, Map3k15, mitogen-activated protein kinase kinase kinase 15, [Score=119, Expect=4e-27]; ENSMUSG00000037989, Wnk2, WNK lysine deficient protein kinase 2, [Score=119, Expect=5e-27]} {Dmel: FBgn0024329, Mekk1, [Score=125, Expect=4e-29]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=131, Expect=3e-31]} {Smed: dd_Smed_v6_3194_0_1, dd_Smed_v6_3194_0_1, [Score=113, Expect=6e-26]} {RNA1509_27731} {RNA1310_10050} {RNA815_9449.1} |
Cumulative graph for MligTC455_27512
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.603 | 1.709 | 0.65452 | 1.00000 | |
| RegionR2 | -0.281 | 1.709 | 0.93686 | 1.00000 | |
| RegionR3 | 0.047 | 1.709 | 0.85049 | 1.00000 | |
| RegionR4 | 0.106 | 1.709 | 0.83320 | 1.00000 | |
| RegionR5 | -0.155 | 1.709 | 0.90453 | 1.00000 | |
| RegionR6 | 1.098 | 1.709 | 0.31767 | 0.90609 | |
| RegionR7 | 0.124 | 1.709 | 0.84766 | 1.00000 | |
| RegionR8 | 1.664 | 1.709 | 0.36746 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.482 | 1.709 | 0.56918 | 1.00000 | |
| RegenerationR2 | 0.716 | 1.709 | 0.34223 | 0.77672 | |
| RegenerationR3 | -0.151 | 1.709 | 0.84676 | 0.99706 | |
| RegenerationR4 | 0.369 | 1.709 | 0.71038 | 0.95751 | |
| RegenerationR5 | -0.72 | 1.709 | 0.41512 | 0.80844 | |
| RegenerationR6 | -1.048 | 1.709 | 0.22031 | 0.56437 | |
| RegenerationBL | 0.039 | 1.709 | 0.99456 | 1.00000 | |
| RegenerationTP | -1.445 | 1.709 | 0.35823 | 0.79891 |
Genes with expression patterns similar to MligTC455_27512
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27512 | 79 | 1.64 | Mlig455_027728 | Neo: - Age: - |
MAP3K4 | 4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_027728 {REF} {Length: 2991} {Pfam: Protein kinase domain [PF00069.27, score=167.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=120.5]; Ankyrin repeats (3 copies) [PF12796.9, score=78.1]; Ankyrin repeats (many copies) [PF13637.8, score=59.6]; Ankyrin repeat [PF13606.8, score=55.8]; Ankyrin repeats (many copies) [PF13857.8, score=46.1]; Ankyrin repeat [PF00023.32, score=44.4]; Fungal protein kinase [PF17667.3, score=27.5]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=130, Expect=2e-30]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=125, Expect=3e-29]; ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=120, Expect=2e-27]; ENSMUSG00000031303, Map3k15, mitogen-activated protein kinase kinase kinase 15, [Score=119, Expect=4e-27]; ENSMUSG00000037989, Wnk2, WNK lysine deficient protein kinase 2, [Score=119, Expect=5e-27]} {Dmel: FBgn0024329, Mekk1, [Score=125, Expect=4e-29]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=131, Expect=3e-31]} {Smed: dd_Smed_v6_3194_0_1, dd_Smed_v6_3194_0_1, [Score=113, Expect=6e-26]} {RNA1509_27731} {RNA1310_10050} {RNA815_9449.1} |
| 2. | MligTC455_26291 | 225 | 4.68 | Mlig455_056042 | Neo: - Age: - |
SH3GL3 | 0.971 | - | - | 0.971 | - | - | - | Mlig455_056042 {REF} {Length: 5761} {TRANSSPLICED} {Pfam: BAR domain [PF03114.20, score=214.4]; Variant SH3 domain [PF14604.8, score=52.2]; SH3 domain [PF00018.30, score=49.3]; Bin/amphiphysin/Rvs domain for vesicular trafficking [PF10455.11, score=48.4]; Variant SH3 domain [PF07653.19, score=43.3]; BAR domain of APPL family [PF16746.7, score=20.5]} {Human: ENSG00000140600, SH3GL3, SH3 domain containing GRB2 like 3, endophilin A3, [RH, Score=319, Expect=4e-107]} {Mouse: ENSMUSG00000030638, Sh3gl3, SH3-domain GRB2-like 3, [Score=324, Expect=3e-109]; ENSMUSG00000003200, Sh3gl1, SH3-domain GRB2-like 1, [Score=318, Expect=8e-107]; ENSMUSG00000028488, Sh3gl2, SH3-domain GRB2-like 2, [Score=313, Expect=4e-105]} {Dmel: FBgn0038659, EndoA, Endophilin A, [Score=322, Expect=2e-108]} {Celegans: WBGene00006791, unc-57, Endophilin-A homolog, [Score=311, Expect=4e-104]} {Smed: dd_Smed_v6_6372_0_1, dd_Smed_v6_6372_0_1, [Score=364, Expect=4e-125]} {RNA1509_12847} {RNA1310_590.2} {RNA815_3052.1} |
| 3. | MligTC455_54109 | 90 | 1.86 | Mlig455_035214 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_035214 {REF} {Length: 4537} {TRANSSPLICED} {RNA1509_36649} {RNA1310_5371, RNA1509_36649} {RNA1509_36649, RNA815_31423} | |
| 4. | MligTC455_18251 | 70 | 1.46 | Mlig455_003377 | Neo: - Age: Down-Up-Down |
GDPGP1 | 0.959 | - | - | 0.959 | - | - | - | Mlig455_003377 {REF} {Length: 1465} {Human: ENSG00000183208, GDPGP1, GDP-D-glucose phosphorylase 1, [RH, Score=102, Expect=1e-23]} {Mouse: ENSMUSG00000050973, Gdpgp1, GDP-D-glucose phosphorylase 1, [RH, Score=108, Expect=6e-26]} {Dmel: FBgn0035999, CG3552, [Score=89.7, Expect=2e-19]} {Celegans: WBGene00015678, mcp-1, GDP-D-glucose phosphorylase 1, [RH, Score=91.3, Expect=7e-20]} {Smed: dd_Smed_v6_14725_0_1, dd_Smed_v6_14725_0_1, [RH, Score=95.5, Expect=6e-22]} {RNA1509_28338} {RNA1310_11480} {RNA815_12039} |
| 5. | MligTC455_46602 | 231 | 4.8 | Mlig455_024992 | Neo: - Age: logFC(26M/2M)=0.375 |
PTPN6 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_024992 {REF} {Length: 2678} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=216.4]; SH2 domain [PF00017.26, score=23.1]} {Human: ENSG00000111679, PTPN6, protein tyrosine phosphatase, non-receptor type 6, [Score=203, Expect=2e-57]; ENSG00000179295, PTPN11, protein tyrosine phosphatase, non-receptor type 11, [Score=201, Expect=8e-57]} {Mouse: ENSMUSG00000004266, Ptpn6, protein tyrosine phosphatase, non-receptor type 6, [Score=214, Expect=2e-61]} {Dmel: FBgn0261985, Ptpmeg, Protein tyrosine phosphatase Meg, [Score=149, Expect=1e-37]} {Celegans: WBGene00004214, ptp-2, Tyrosine-protein phosphatase non-receptor type ptp-2, [Score=184, Expect=2e-50]} {Smed: dd_Smed_v6_5785_0_1, dd_Smed_v6_5785_0_1, [Score=214, Expect=1e-61]} {RNA1509_17439} {RNA1310_10787.1, RNA1509_17439} {RNA1509_17439, RNA815_8481} |
| 6. | MligTC455_24455 | 131 | 2.72 | Mlig455_006310 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_006310 {REF} {Length: 2448} {RNA1509_7020} {RNA1310_76552} {RNA815_41542} | |
| 7. | MligTC455_33707 | 211 | 4.4 | Mlig455_018361 | Neo: - Age: - |
XRRA1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_018361 {REF} {Length: 3845} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=41.5]; Leucine rich repeat [PF13855.8, score=28.9]} {Human: ENSG00000166435, XRRA1, X-ray radiation resistance associated 1, [RH, Score=167, Expect=1e-45]} {Mouse: ENSMUSG00000035211, Xrra1, X-ray radiation resistance associated 1, [RH, Score=171, Expect=1e-43]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=63.9, Expect=7e-10]} {Smed: dd_Smed_v6_13519_0_1, dd_Smed_v6_13519_0_1, [RH, Score=154, Expect=3e-38]} {RNA1509_45583} {RNA1310_16743.1} {RNA815_17679} |
Berezikov Lab - 2020-2021 © ERIBA