TomoSeq data search

Data search

Results for MligTC455_27528

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27528	624	12.99	Mlig455_050097	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.487	CASP3	Mlig455_050097 {REF} {Length: 3340} {Pfam: Caspase domain [PF00656.24, score=100.8]; Lecithin retinol acyltransferase [PF04970.15, score=56.7]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=137, Expect=5e-36]; ENSG00000165806, CASP7, caspase 7, [Score=135, Expect=9e-35]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=138, Expect=1e-36]; ENSMUSG00000025076, Casp7, caspase 7, [Score=136, Expect=1e-35]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=96.7, Expect=1e-21]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=86.7, Expect=1e-18]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=137, Expect=4e-37]} {RNA1509_50510, RNA1509_54055} {RNA1310_7723.1, RNA1509_50510, RNA1509_54055} {RNA1509_50510, RNA1509_54055, RNA815_3802}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27528

624

12.99

Mlig455_050097

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.487

CASP3

Mlig455_050097 {REF} {Length: 3340} {Pfam: Caspase domain [PF00656.24, score=100.8]; Lecithin retinol acyltransferase [PF04970.15, score=56.7]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=137, Expect=5e-36]; ENSG00000165806, CASP7, caspase 7, [Score=135, Expect=9e-35]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=138, Expect=1e-36]; ENSMUSG00000025076, Casp7, caspase 7, [Score=136, Expect=1e-35]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=96.7, Expect=1e-21]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=86.7, Expect=1e-18]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=137, Expect=4e-37]} {RNA1509_50510, RNA1509_54055} {RNA1310_7723.1, RNA1509_50510, RNA1509_54055} {RNA1509_50510, RNA1509_54055, RNA815_3802}

Cumulative graph for MligTC455_27528

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.259	3.913	0.81161	1.00000
RegionR2	-0.127	3.913	0.85128	1.00000
RegionR3	0.415	3.913	0.45696	0.96759
RegionR4	0.498	3.913	0.44780	0.77697
RegionR5	0.032	3.913	0.95360	1.00000
RegionR6	0.546	3.913	0.31981	0.90857
RegionR7	-0.214	3.913	0.74087	1.00000
RegionR8	-0.891	3.913	0.29537	0.92428

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.385	3.913	0.78026	1.00000
RegenerationR2	-1.043	3.913	0.13848	0.56702
RegenerationR3	-0.874	3.913	0.20662	0.64181
RegenerationR4	-1.111	3.913	0.12700	0.54126
RegenerationR5	-0.637	3.913	0.35959	0.77101
RegenerationR6	-1.894	3.913	0.01165	0.13265
RegenerationBL	-1.108	3.913	0.14505	0.45424
RegenerationTP	-0.146	3.913	0.85305	1.00000

Genes with expression patterns similar to MligTC455_27528

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27528	624	12.99	Mlig455_050097	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.487	CASP3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_050097 {REF} {Length: 3340} {Pfam: Caspase domain [PF00656.24, score=100.8]; Lecithin retinol acyltransferase [PF04970.15, score=56.7]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=137, Expect=5e-36]; ENSG00000165806, CASP7, caspase 7, [Score=135, Expect=9e-35]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=138, Expect=1e-36]; ENSMUSG00000025076, Casp7, caspase 7, [Score=136, Expect=1e-35]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=96.7, Expect=1e-21]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=86.7, Expect=1e-18]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=137, Expect=4e-37]} {RNA1509_50510, RNA1509_54055} {RNA1310_7723.1, RNA1509_50510, RNA1509_54055} {RNA1509_50510, RNA1509_54055, RNA815_3802}
2.	MligTC455_35011	387	8.07	Mlig455_060710	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.676	CALML5	0.971	-	-	-	-	0.971	-	Mlig455_060710 {REF} {Length: 1545} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=51.8]; EF-hand domain pair [PF13499.8, score=50.0]; EF-hand domain [PF13405.8, score=42.7]; EF-hand domain pair [PF13833.8, score=41.2]; EF hand [PF13202.8, score=39.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=26.6]} {Human: ENSG00000178372, CALML5, calmodulin like 5, [Score=56.2, Expect=3e-10]} {Mouse: ENSMUSG00000005649, Cabp5, calcium binding protein 5, [Score=55.5, Expect=8e-10]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=48.5, Expect=1e-07]} {Celegans: WBGene00006861, cal-5, CALmodulin related genes, [Score=62.8, Expect=6e-13]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=50.4, Expect=2e-08]} {RNA1509_32665} {RNA1310_29494.2, RNA1509_32665} {RNA1509_32665, RNA815_16454.1}
3.	MligTC455_18176	338	7.05	Mlig455_026356, Mlig455_052708	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_026356 {REF} {Length: 459} {TRANSSPLICED} {RNA1509_35702} {RNA1310_65979} {RNA815_34776.1} Mlig455_052708 {REF} {Length: 866} {RNA1509_48975} {RNA1310_65979} {RNA815_34776.1}
4.	MligTC455_28199	267	5.56	Mlig455_059062	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_059062 {REF} {Length: 1150} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=95.8]} {RNA1509_5424} {RNA1310_9365} {RNA815_12631}
5.	MligTC455_33872	87	1.81	Mlig455_032191	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_032191 {REF} {Length: 3116} {TRANSSPLICED} {RNA1509_14655} {RNA1310_22046.1, RNA1509_14655} {RNA1509_14655, RNA815_8738}