TomoSeq data search

Data search

Results for MligTC455_27529

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27529	336	7.00	Mlig455_050050, Mlig455_054018	Neo: - Age: -	CASP3, ITPKA	Mlig455_050050 {REF} {Length: 4046} {Pfam: Caspase domain [PF00656.24, score=100.8]; Lecithin retinol acyltransferase [PF04970.15, score=56.7]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=137, Expect=5e-36]; ENSG00000165806, CASP7, caspase 7, [Score=135, Expect=9e-35]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=138, Expect=1e-36]; ENSMUSG00000025076, Casp7, caspase 7, [Score=136, Expect=1e-35]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=96.7, Expect=1e-21]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=86.7, Expect=1e-18]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=137, Expect=4e-37]} {RNA1509_22141} {RNA1310_7723.1} {RNA815_3802} Mlig455_054018 {REF} {Length: 5483} {Pfam: Inositol polyphosphate kinase [PF03770.18, score=120.6]; Caspase domain [PF00656.24, score=98.8]; Lecithin retinol acyltransferase [PF04970.15, score=57.0]} {Human: ENSG00000137825, ITPKA, inositol-trisphosphate 3-kinase A, [RH, Score=244, Expect=4e-71]; ENSG00000143772, ITPKB, inositol-trisphosphate 3-kinase B, [RH, Score=236, Expect=3e-64]} {Mouse: ENSMUSG00000027296, Itpka, inositol 1,4,5-trisphosphate 3-kinase A, [RH, Score=246, Expect=6e-72]} {Dmel: FBgn0032147, IP3K1, Inositol 1,4,5-triphosphate kinase 1, [RH, Score=215, Expect=5e-61]} {Celegans: WBGene00002979, lfe-2, Inositol-trisphosphate 3-kinase homolog, [RH, Score=244, Expect=7e-71]} {Smed: dd_Smed_v6_3687_0_1, dd_Smed_v6_3687_0_1, [Score=221, Expect=6e-62]} {RNA1509_22141} {RNA1310_7723.1} {RNA815_3802}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27529

336

7.00

Mlig455_050050, Mlig455_054018

Neo: -

Age: -

CASP3, ITPKA

Mlig455_050050 {REF} {Length: 4046} {Pfam: Caspase domain [PF00656.24, score=100.8]; Lecithin retinol acyltransferase [PF04970.15, score=56.7]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=137, Expect=5e-36]; ENSG00000165806, CASP7, caspase 7, [Score=135, Expect=9e-35]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=138, Expect=1e-36]; ENSMUSG00000025076, Casp7, caspase 7, [Score=136, Expect=1e-35]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=96.7, Expect=1e-21]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=86.7, Expect=1e-18]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=137, Expect=4e-37]} {RNA1509_22141} {RNA1310_7723.1} {RNA815_3802}

Mlig455_054018 {REF} {Length: 5483} {Pfam: Inositol polyphosphate kinase [PF03770.18, score=120.6]; Caspase domain [PF00656.24, score=98.8]; Lecithin retinol acyltransferase [PF04970.15, score=57.0]} {Human: ENSG00000137825, ITPKA, inositol-trisphosphate 3-kinase A, [RH, Score=244, Expect=4e-71]; ENSG00000143772, ITPKB, inositol-trisphosphate 3-kinase B, [RH, Score=236, Expect=3e-64]} {Mouse: ENSMUSG00000027296, Itpka, inositol 1,4,5-trisphosphate 3-kinase A, [RH, Score=246, Expect=6e-72]} {Dmel: FBgn0032147, IP3K1, Inositol 1,4,5-triphosphate kinase 1, [RH, Score=215, Expect=5e-61]} {Celegans: WBGene00002979, lfe-2, Inositol-trisphosphate 3-kinase homolog, [RH, Score=244, Expect=7e-71]} {Smed: dd_Smed_v6_3687_0_1, dd_Smed_v6_3687_0_1, [Score=221, Expect=6e-62]} {RNA1509_22141} {RNA1310_7723.1} {RNA815_3802}

Cumulative graph for MligTC455_27529

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.489	3.408	0.45383	1.00000
RegionR2	-0.381	3.408	0.64864	0.98404
RegionR3	0.597	3.408	0.35365	0.88923
RegionR4	1.103	3.408	0.16003	0.41712
RegionR5	-0.188	3.408	0.77112	1.00000
RegionR6	0.398	3.408	0.53084	1.00000
RegionR7	0.309	3.408	0.67602	1.00000
RegionR8	-0.348	3.408	0.72310	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.696	3.408	0.45157	1.00000
RegenerationR2	-0.322	3.408	0.64710	0.93518
RegenerationR3	-0.522	3.408	0.47294	0.84578
RegenerationR4	-0.98	3.408	0.21506	0.66197
RegenerationR5	-0.172	3.408	0.80944	0.99130
RegenerationR6	-1.454	3.408	0.06688	0.32422
RegenerationBL	-0.159	3.408	0.84347	1.00000
RegenerationTP	-0.624	3.408	0.50633	0.90415

Genes with expression patterns similar to MligTC455_27529

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27529	336	7	Mlig455_050050, Mlig455_054018	Neo: - Age: -	CASP3, ITPKA	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_050050 {REF} {Length: 4046} {Pfam: Caspase domain [PF00656.24, score=100.8]; Lecithin retinol acyltransferase [PF04970.15, score=56.7]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=137, Expect=5e-36]; ENSG00000165806, CASP7, caspase 7, [Score=135, Expect=9e-35]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=138, Expect=1e-36]; ENSMUSG00000025076, Casp7, caspase 7, [Score=136, Expect=1e-35]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=96.7, Expect=1e-21]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=86.7, Expect=1e-18]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=137, Expect=4e-37]} {RNA1509_22141} {RNA1310_7723.1} {RNA815_3802} Mlig455_054018 {REF} {Length: 5483} {Pfam: Inositol polyphosphate kinase [PF03770.18, score=120.6]; Caspase domain [PF00656.24, score=98.8]; Lecithin retinol acyltransferase [PF04970.15, score=57.0]} {Human: ENSG00000137825, ITPKA, inositol-trisphosphate 3-kinase A, [RH, Score=244, Expect=4e-71]; ENSG00000143772, ITPKB, inositol-trisphosphate 3-kinase B, [RH, Score=236, Expect=3e-64]} {Mouse: ENSMUSG00000027296, Itpka, inositol 1,4,5-trisphosphate 3-kinase A, [RH, Score=246, Expect=6e-72]} {Dmel: FBgn0032147, IP3K1, Inositol 1,4,5-triphosphate kinase 1, [RH, Score=215, Expect=5e-61]} {Celegans: WBGene00002979, lfe-2, Inositol-trisphosphate 3-kinase homolog, [RH, Score=244, Expect=7e-71]} {Smed: dd_Smed_v6_3687_0_1, dd_Smed_v6_3687_0_1, [Score=221, Expect=6e-62]} {RNA1509_22141} {RNA1310_7723.1} {RNA815_3802}
2.	MligTC455_17224	155	3.22	Mlig455_069916	Neo: - Age: -	TBPL2	0.977	-	-	-	-	0.977	-	Mlig455_069916 {REF} {Length: 699} {Pfam: Transcription factor TFIID (or TATA-binding protein, TBP) [PF00352.23, score=46.0]} {Human: ENSG00000182521, TBPL2, TATA-box binding protein like 2, [Score=47.0, Expect=1e-06]; ENSG00000112592, TBP, TATA-box binding protein, [Score=45.1, Expect=5e-06]} {Mouse: ENSMUSG00000061809, Tbpl2, TATA box binding protein like 2, [Score=48.1, Expect=3e-07]} {Dmel: FBgn0003687, Tbp, TATA binding protein, [Score=48.1, Expect=2e-07]} {Celegans: WBGene00006577, tlf-1, TBP-Like Factor; TBP-like factor, [Score=45.8, Expect=1e-06]} {RNA1509_12203} {RNA1310_37970} {RNA815_7432}
3.	MligTC455_36666	222	4.63	Mlig455_008425	Neo: - Age: -		0.967	-	-	-	-	0.967	-	Mlig455_008425 {REF} {Length: 1550} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=111.3]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=62.0, Expect=1e-10]} {RNA1509_57500} {RNA1310_38108} {RNA815_17993}
4.	MligTC455_34700	158	3.28	Mlig455_037094	Neo: - Age: Down-Down-Up	HGD	0.955	-	-	-	-	0.955	-	Mlig455_037094 {REF} {Length: 3523} {Pfam: homogentisate 1,2-dioxygenase [PF04209.15, score=195.6]} {Human: ENSG00000113924, HGD, homogentisate 1,2-dioxygenase, [Score=178, Expect=4e-54]} {Mouse: ENSMUSG00000022821, Hgd, homogentisate 1, 2-dioxygenase, [Score=181, Expect=4e-55]} {Dmel: FBgn0040211, hgo, homogentisate 1,2-dioxygenase, [Score=180, Expect=5e-55]} {Celegans: WBGene00001843, hgo-1, Homogentisate 1,2-dioxygenase, [Score=186, Expect=2e-57]} {Smed: dd_Smed_v6_2908_0_1, dd_Smed_v6_2908_0_1, [Score=157, Expect=3e-46]} {RNA1509_15283} {RNA1310_18945} {RNA815_2326}
5.	MligTC455_09737	27	0.55	Mlig455_013172	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_013172 {REF} {Length: 1917} {NoTransDecoderORF} {RNA1310_57188} {RNA815_38434}