Data search
Results for MligTC455_27588
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27588 | 65 | 1.35 | Mlig455_046450 | Neo: - Age: - |
NYNRIN | Mlig455_046450 {REF} {Length: 4701} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=118.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=110.0]; Integrase core domain [PF00665.28, score=51.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.5]; Integrase zinc binding domain [PF17921.3, score=50.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.8]; Integrase core domain [PF13683.8, score=22.2]; Aspartyl protease [PF13650.8, score=20.8]; H2C2 zinc finger [PF09337.12, score=19.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=54.3, Expect=1e-06]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=89.0, Expect=2e-17]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=89.0, Expect=2e-17]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=249, Expect=7e-69]} {RNA1509_51271} {RNA1310_6932} {RNA815_14765} |
Cumulative graph for MligTC455_27588
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.502 | 1.476 | 0.99967 | 1.00000 | |
| RegionR2 | 0.58 | 1.476 | 0.55300 | 0.91801 | |
| RegionR3 | -0.365 | 1.476 | 0.85402 | 1.00000 | |
| RegionR4 | 2.42 | 1.476 | 0.10684 | 0.32167 | |
| RegionR5 | 1.704 | 1.476 | 0.14077 | 0.38626 | |
| RegionR6 | 1.011 | 1.476 | 0.39308 | 0.96729 | |
| RegionR7 | -3.123 | 1.476 | 0.99974 | 1.00000 | |
| RegionR8 | 0.274 | 1.476 | 0.75926 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.92 | 1.476 | 0.77614 | 1.00000 | |
| RegenerationR2 | -0.763 | 1.476 | 0.29504 | 0.73738 | |
| RegenerationR3 | 1.392 | 1.476 | 0.21192 | 0.64785 | |
| RegenerationR4 | 0.434 | 1.476 | 0.64066 | 0.92802 | |
| RegenerationR5 | 0.183 | 1.476 | 0.84163 | 1.00000 | |
| RegenerationR6 | -0.514 | 1.476 | 0.64288 | 0.89464 | |
| RegenerationBL | 1.774 | 1.476 | 0.27610 | 0.63644 | |
| RegenerationTP | 3.943 | 1.476 | 0.02791 | 0.28183 |
Genes with expression patterns similar to MligTC455_27588
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27588 | 65 | 1.35 | Mlig455_046450 | Neo: - Age: - |
NYNRIN | 4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046450 {REF} {Length: 4701} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=118.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=110.0]; Integrase core domain [PF00665.28, score=51.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.5]; Integrase zinc binding domain [PF17921.3, score=50.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.8]; Integrase core domain [PF13683.8, score=22.2]; Aspartyl protease [PF13650.8, score=20.8]; H2C2 zinc finger [PF09337.12, score=19.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=54.3, Expect=1e-06]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=89.0, Expect=2e-17]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=89.0, Expect=2e-17]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=249, Expect=7e-69]} {RNA1509_51271} {RNA1310_6932} {RNA815_14765} |
| 2. | MligTC455_29391 | 19 | 0.4 | Mlig455_042662 | Neo: - Age: Up-Down-Down |
0.961 | - | - | - | - | 0.961 | - | Mlig455_042662 {REF} {Length: 1123} {NoTransDecoderORF} {RNA1509_5313} {RNA1310_1658.1} {RNA815_3536} |
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