Data search
Results for MligTC455_27592
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27592 | 136 | 2.83 | Mlig455_014554 | Neo: - Age: - |
Mlig455_014554 {REF} {Length: 7097} {RNA1509_33228} {RNA1310_27682, RNA1509_33228} {RNA1509_33228, RNA815_23270} |
Cumulative graph for MligTC455_27592
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.891 | 2.178 | 0.47257 | 1.00000 | |
| RegionR2 | 0.324 | 2.178 | 0.75129 | 1.00000 | |
| RegionR3 | 0.47 | 2.178 | 0.65852 | 1.00000 | |
| RegionR4 | 0.125 | 2.178 | 0.82556 | 1.00000 | |
| RegionR5 | 0.131 | 2.178 | 0.81304 | 1.00000 | |
| RegionR6 | 1.153 | 2.178 | 0.27121 | 0.86062 | |
| RegionR7 | 0.671 | 2.178 | 0.61633 | 1.00000 | |
| RegionR8 | 1.017 | 2.178 | 0.54899 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.161 | 2.178 | 0.99990 | 1.00000 | |
| RegenerationR2 | 0.556 | 2.178 | 0.46216 | 0.85353 | |
| RegenerationR3 | 0.21 | 2.178 | 0.81521 | 0.98630 | |
| RegenerationR4 | 0.478 | 2.178 | 0.59714 | 0.91231 | |
| RegenerationR5 | -0.155 | 2.178 | 0.85119 | 1.00000 | |
| RegenerationR6 | 0.432 | 2.178 | 0.59782 | 0.86748 | |
| RegenerationBL | 1.048 | 2.178 | 0.26417 | 0.62266 | |
| RegenerationTP | -0.998 | 2.178 | 0.46857 | 0.87986 |
Genes with expression patterns similar to MligTC455_27592
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27592 | 136 | 2.83 | Mlig455_014554 | Neo: - Age: - |
5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_014554 {REF} {Length: 7097} {RNA1509_33228} {RNA1310_27682, RNA1509_33228} {RNA1509_33228, RNA815_23270} | |
| 2. | MligTC455_16216 | 158 | 3.3 | Mlig455_068299 | Neo: - Age: logFC(26M/2M)=0.459 |
AXIN2 | 1.705 | - | - | 0.733 | - | - | 0.972 | Mlig455_068299 {REF} {Length: 5180} {TRANSSPLICED} {Pfam: DIX domain [PF00778.19, score=84.1]; Regulator of G protein signaling domain [PF00615.21, score=28.6]} {Human: ENSG00000168646, AXIN2, axin 2, [Score=129, Expect=2e-30]} {Mouse: ENSMUSG00000000142, Axin2, axin 2, [Score=110, Expect=1e-24]} {Dmel: FBgn0026597, Axn, Axin, [RH, Score=68.9, Expect=1e-11]} {Smed: dd_Smed_v6_4900_0_1, dd_Smed_v6_4900_0_1, [RH, Score=114, Expect=2e-26]} {RNA1509_26666, RNA1509_46700} {RNA1310_18759, RNA1509_46700} {RNA1509_46700, RNA815_19659} |
| 3. | MligTC455_47365 | 162 | 3.38 | Mlig455_060241 | Neo: - Age: - |
1.695 | - | - | - | 0.731 | - | 0.964 | Mlig455_060241 {REF} {Length: 2435} {TRANSSPLICED} {RNA1509_52272} {RNA1310_20010.2, RNA1509_52272} {RNA1509_52272, RNA815_28545} | |
| 4. | MligTC455_02060 | 78 | 1.63 | Mlig455_009570 | Neo: - Age: logFC(26M/2M)=-0.292 |
PCM1 | 1.681 | - | - | - | - | 0.721 | 0.960 | Mlig455_009570 {REF} {Length: 2628} {Pfam: Pericentriolar material 1 C terminus [PF15717.7, score=22.3]} {Human: ENSG00000078674, PCM1, pericentriolar material 1, [Score=51.6, Expect=3e-06]} {Mouse: ENSMUSG00000031592, Pcm1, pericentriolar material 1, [Score=51.2, Expect=2e-06]} {RNA1509_46460} {RNA1310_12986} {RNA815_6776} |
| 5. | MligTC455_30345 | 55 | 1.15 | Mlig455_052503, Mlig455_058640 | Neo: - Age: - Region-enriched R2: 7.557/0.02160 |
0.968 | - | - | - | - | - | 0.968 | Mlig455_052503 {REF} {Length: 1415} {TRANSSPLICED} {RNA1509_27914} {RNA1310_4467.1} {RNA815_14537.1} Mlig455_058640 {REF} {Length: 1738} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27914} {RNA1310_4467.1} {RNA815_14537.2} |
|
| 6. | MligTC455_50824 | 222 | 4.62 | Mlig455_044698 | Neo: - |
0.958 | - | - | - | 0.958 | - | - | Mlig455_044698 {REF} {Length: 3946} {Mouse: ENSMUSG00000038528, Mfsd4b5, major facilitator superfamily domain containing 4B5, [Score=58.5, Expect=1e-08]} {RNA1509_14390, RNA1509_22841, RNA1509_39271} {RNA1310_2577.1, RNA1509_14390, RNA1509_39271} {RNA1509_14390, RNA1509_39271, RNA815_14372} | |
| 7. | MligTC455_45108 | 63 | 1.32 | Mlig455_032569 | Neo: - Age: logFC(26M/2M)=-0.727 |
MAPK7 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_032569 {REF} {Length: 2662} {Pfam: Protein kinase domain [PF00069.27, score=209.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=114.7]; ABC1 atypical kinase-like domain [PF03109.18, score=20.1]; Haspin like kinase domain [PF12330.10, score=18.2]} {Human: ENSG00000166484, MAPK7, mitogen-activated protein kinase 7, [Score=213, Expect=4e-59]; ENSG00000112062, MAPK14, mitogen-activated protein kinase 14, [Score=209, Expect=9e-62]; ENSG00000156711, MAPK13, mitogen-activated protein kinase 13, [Score=204, Expect=7e-60]; ENSG00000188130, MAPK12, mitogen-activated protein kinase 12, [Score=204, Expect=7e-60]} {Mouse: ENSMUSG00000022610, Mapk12, mitogen-activated protein kinase 12, [Score=214, Expect=2e-63]; ENSMUSG00000001034, Mapk7, mitogen-activated protein kinase 7, [Score=213, Expect=2e-59]; ENSMUSG00000004864, Mapk13, mitogen-activated protein kinase 13, [Score=210, Expect=4e-62]; ENSMUSG00000053436, Mapk14, mitogen-activated protein kinase 14, [Score=208, Expect=1e-61]} {Dmel: FBgn0024846, p38b, p38b MAP kinase, [Score=194, Expect=4e-56]} {Celegans: WBGene00003402, mpk-2, Mitogen-activated protein kinase, [Score=206, Expect=3e-60]} {Smed: dd_Smed_v6_1319_0_1, dd_Smed_v6_1319_0_1, [Score=198, Expect=5e-58]} {RNA1509_34513} {RNA1310_13913, RNA1509_34513} {RNA1509_34513, RNA815_4986} |
| 8. | MligTC455_38957 | 86 | 1.79 | Mlig455_007298 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_007298 {REF} {Length: 2554} {Pfam: EF-hand domain [PF13405.8, score=33.1]; EF-hand domain pair [PF13499.8, score=27.9]; EF hand [PF00036.34, score=22.3]} {Mouse: ENSMUSG00000030321, Efcab12, EF-hand calcium binding domain 12, [RH, Score=66.2, Expect=1e-10]} {Smed: dd_Smed_v6_10608_0_1, dd_Smed_v6_10608_0_1, [RH, Score=54.7, Expect=1e-08]} {RNA1509_20232} {RNA1310_17116} {RNA815_14272} | |
| 9. | MligTC455_26079 | 23 | 0.47 | Mlig455_064466 | Neo: - Age: logFC(26M/2M)=-0.450 |
MTHFD1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_064466 {REF} {Length: 3421} {Pfam: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain [PF00763.25, score=100.1]; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain [PF02882.21, score=93.9]; Enoyl-CoA hydratase/isomerase [PF00378.22, score=51.2]; Formyl transferase, C-terminal domain [PF02911.20, score=45.8]; Formyl transferase [PF00551.21, score=24.6]} {Human: ENSG00000100714, MTHFD1, methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, [Score=219, Expect=4e-58]} {Mouse: ENSMUSG00000021048, Mthfd1, methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase, [Score=207, Expect=8e-55]} {Dmel: FBgn0020385, pug, pugilist, [Score=190, Expect=3e-49]} {Celegans: WBGene00000929, dao-3, Dauer or Aging adult Overexpression, [Score=164, Expect=1e-44]} {Smed: dd_Smed_v6_1858_0_1, dd_Smed_v6_1858_0_1, [Score=164, Expect=3e-41]} {RNA1509_56587} {RNA1310_3893.2} {RNA815_1225} |
| 10. | MligTC455_31935 | 299 | 6.24 | Mlig455_046201 | Neo: - Age: - Region-enriched R1: 6.310/0.00233 |
0.95 | - | - | - | - | - | 0.950 | Mlig455_046201 {REF} {Length: 1782} {Pfam: RICH domain [PF05062.14, score=19.2]} {RNA1509_2515} {RNA1310_26891} {RNA815_3258.1} |
Berezikov Lab - 2020-2021 © ERIBA