Data search
Results for MligTC455_27602
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27602 | 34 | 0.72 | Mlig455_048361 | Neo: - Age: - |
Mlig455_048361 {REF} {Length: 6470} {NoTransDecoderORF} {RNA1509_25664} {RNA1310_15630} {RNA815_31395} |
Cumulative graph for MligTC455_27602
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.121 | 1.051 | 0.99996 | 1.00000 | |
| RegionR2 | 0.145 | 1.051 | 0.99995 | 1.00000 | |
| RegionR3 | -0.062 | 1.051 | 0.99997 | 1.00000 | |
| RegionR4 | -0.348 | 1.051 | 0.99990 | 1.00000 | |
| RegionR5 | -0.216 | 1.051 | 0.99993 | 1.00000 | |
| RegionR6 | -0.157 | 1.051 | 0.99999 | 1.00000 | |
| RegionR7 | 0.156 | 1.051 | 0.99997 | 1.00000 | |
| RegionR8 | 0.362 | 1.051 | 0.99996 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.165 | 1.051 | 1.00000 | 1.00000 | |
| RegenerationR2 | 3.985 | 1.051 | 0.00410 | 0.09885 | |
| RegenerationR3 | 3.605 | 1.051 | 0.05357 | 0.39879 | |
| RegenerationR4 | 3.304 | 1.051 | 0.03417 | 0.29841 | |
| RegenerationR5 | 3.44 | 1.051 | 0.01939 | 0.24061 | |
| RegenerationR6 | 5.06 | 1.051 | 0.00520 | 0.08709 | |
| RegenerationBL | 4.989 | 1.051 | 0.00852 | 0.09123 | |
| RegenerationTP | 3.034 | 1.051 | 0.29114 | 0.73625 |
Genes with expression patterns similar to MligTC455_27602
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27602 | 34 | 0.72 | Mlig455_048361 | Neo: - Age: - |
2 | - | - | - | - | 1.000 | 1.000 | Mlig455_048361 {REF} {Length: 6470} {NoTransDecoderORF} {RNA1509_25664} {RNA1310_15630} {RNA815_31395} | |
| 2. | MligTC455_11632 | 18 | 0.38 | Mlig455_064774 | Neo: - Age: - |
CFAP126 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_064774 {REF} {Length: 2533} {Human: ENSG00000188931, CFAP126, cilia and flagella associated protein 126, [Score=59.7, Expect=5e-10]} {Mouse: ENSMUSG00000026649, Cfap126, cilia and flagella associated protein 126, [Score=63.2, Expect=3e-11]} {RNA1310_44557.2} {RNA815_31853} |
| 3. | MligTC455_42007 | 124 | 2.58 | Mlig455_018501 | Neo: - Age: - |
RAB19 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_018501 {REF} {Length: 2460} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=184.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=110.8]; ADP-ribosylation factor family [PF00025.23, score=46.0]; 50S ribosome-binding GTPase [PF01926.25, score=20.5]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.0]} {Human: ENSG00000146955, RAB19, RAB19, member RAS oncogene family, [RH, Score=210, Expect=1e-68]} {Mouse: ENSMUSG00000030055, Rab43, RAB43, member RAS oncogene family, [Score=214, Expect=2e-70]} {Dmel: FBgn0015793, Rab19, [Score=202, Expect=1e-65]} {Celegans: WBGene00004278, rab-19, RAB family, [Score=206, Expect=2e-67]} {Smed: dd_Smed_v6_2494_0_1, dd_Smed_v6_2494_0_1, [Score=225, Expect=5e-75]} {RNA1509_47323} {RNA1310_38772.1} {RNA815_20749} |
| 4. | MligTC455_30945 | 168 | 3.5 | Mlig455_020180 | Neo: - Age: - |
TUBB3 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_020180 {REF} {Length: 2483} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=234.4]; Tubulin C-terminal domain [PF03953.19, score=145.4]; Misato Segment II tubulin-like domain [PF10644.11, score=22.8]} {Human: ENSG00000258947, TUBB3, tubulin beta 3 class III, [RH, Score=803, Expect=0.0]} {Mouse: ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [RH, Score=802, Expect=0.0]; ENSMUSG00000001473, Tubb6, tubulin, beta 6 class V, [RH, Score=788, Expect=0.0]} {Dmel: FBgn0003888, betaTub60D, beta-Tubulin at 60D, [RH, Score=794, Expect=0.0]} {Celegans: WBGene00000248, ben-1, Tubulin beta chain, [RH, Score=798, Expect=0.0]} {Smed: dd_Smed_v6_83_0_2, dd_Smed_v6_83_0_2, [Score=805, Expect=0.0]} {RNA1509_35307} {RNA1310_15130.1} {RNA815_4702.1} |
| 5. | MligTC455_23591 | 25 | 0.52 | Mlig455_012682 | Neo: - Age: - |
PLK4 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_012682 {REF} {Length: 3325} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=251.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=166.5]; Polo-like Kinase 4 Polo Box 2 [PF18409.3, score=62.0]; Polo-like Kinase 4 Polo Box 1 [PF18190.3, score=32.3]; Kinase-like [PF14531.8, score=30.8]; ABC1 atypical kinase-like domain [PF03109.18, score=23.0]; Fungal protein kinase [PF17667.3, score=22.2]} {Human: ENSG00000142731, PLK4, polo like kinase 4, [RH, Score=337, Expect=8e-102]} {Mouse: ENSMUSG00000116326, Plk4, polo like kinase 4, [RH, Score=276, Expect=9e-80]; ENSMUSG00000025758, Plk4, polo like kinase 4, [RH, Score=276, Expect=9e-80]} {Dmel: FBgn0026371, SAK, Sak kinase, [RH, Score=260, Expect=4e-75]} {Celegans: WBGene00004042, plk-1, Serine/threonine-protein kinase plk-1, [Score=199, Expect=2e-54]} {Smed: dd_Smed_v6_12637_0_1, dd_Smed_v6_12637_0_1, [RH, Score=305, Expect=3e-91]} {RNA1509_18046} {RNA1310_6634} {RNA815_3423.1} |
| 6. | MligTC455_49718 | 757 | 15.78 | Mlig455_068225 | Neo: - Age: - Regeneration-enriched BL: 2.363 |
NLK | 0.956 | - | - | - | - | 0.956 | - | Mlig455_068225 {REF} {Length: 2645} {Pfam: Protein kinase domain [PF00069.27, score=205.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.2]; ABC1 atypical kinase-like domain [PF03109.18, score=21.1]; Fungal protein kinase [PF17667.3, score=19.9]} {Human: ENSG00000087095, NLK, nemo like kinase, [RH, Score=438, Expect=1e-149]} {Mouse: ENSMUSG00000017376, Nlk, nemo like kinase, [RH, Score=438, Expect=7e-150]} {Dmel: FBgn0011817, nmo, nemo, [RH, Score=442, Expect=8e-153]} {Celegans: WBGene00003048, lit-1, Serine/threonine kinase NLK, [RH, Score=402, Expect=1e-136]} {Smed: dd_Smed_v6_4172_0_3, dd_Smed_v6_4172_0_3, [RH, Score=416, Expect=2e-142]} {RNA1509_20551} {RNA1310_9465} {RNA815_12333} |
| 7. | MligTC455_53025 | 243 | 5.06 | Mlig455_017172, Mlig455_048121 | Neo: - Age: - Region-enriched R8: 3.427/0.00445 |
BARHL2 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_017172 {REF} {Length: 2016} {Pfam: Homeodomain [PF00046.31, score=76.6]} {Human: ENSG00000143032, BARHL2, BarH like homeobox 2, [RH, Score=168, Expect=4e-48]; ENSG00000125492, BARHL1, BarH like homeobox 1, [RH, Score=161, Expect=3e-46]} {Mouse: ENSMUSG00000034384, Barhl2, BarH like homeobox 2, [RH, Score=167, Expect=4e-48]; ENSMUSG00000026805, Barhl1, BarH like homeobox 1, [RH, Score=161, Expect=3e-46]} {Dmel: FBgn0011758, B-H1, BarH1, [RH, Score=150, Expect=2e-40]} {Celegans: WBGene00000452, ceh-31, Homeobox protein ceh-31, [RH, Score=154, Expect=1e-44]} {Smed: dd_Smed_v6_16007_0_1, dd_Smed_v6_16007_0_1, [RH, Score=201, Expect=1e-62]} {RNA1509_57938} {RNA1310_8308.1} {RNA815_22138} Mlig455_048121 {REF} {Length: 2000} {Pfam: Homeodomain [PF00046.31, score=75.3]} {Human: ENSG00000143032, BARHL2, BarH like homeobox 2, [RH, Score=168, Expect=5e-47]; ENSG00000125492, BARHL1, BarH like homeobox 1, [RH, Score=162, Expect=3e-45]} {Mouse: ENSMUSG00000034384, Barhl2, BarH like homeobox 2, [RH, Score=167, Expect=6e-47]; ENSMUSG00000026805, Barhl1, BarH like homeobox 1, [RH, Score=161, Expect=4e-45]} {Dmel: FBgn0011758, B-H1, BarH1, [RH, Score=151, Expect=8e-40]} {Celegans: WBGene00000452, ceh-31, Homeobox protein ceh-31, [RH, Score=155, Expect=5e-44]} {Smed: dd_Smed_v6_16007_0_1, dd_Smed_v6_16007_0_1, [RH, Score=202, Expect=8e-62]} {RNA1509_57938} {RNA1310_8308.1} {RNA815_22138} |
| 8. | MligTC455_19934 | 704 | 14.66 | Mlig455_001454 | Neo: - Age: - Region-enriched R8: 4.340/0.00000 |
HOXA10 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_001454 {REF} {Length: 2331} {Pfam: Homeodomain [PF00046.31, score=71.5]; Protein of unknown function (DUF2722) [PF10846.10, score=21.4]; Anti-sigma-K factor rskA [PF10099.11, score=20.2]} {Human: ENSG00000253293, HOXA10, homeobox A10, [RH, Score=97.4, Expect=1e-21]; ENSG00000128713, HOXD11, homeobox D11, [RH, Score=95.5, Expect=2e-21]; ENSG00000170178, HOXD12, homeobox D12, [RH, Score=95.1, Expect=9e-22]; ENSG00000123407, HOXC12, homeobox C12, [RH, Score=94.7, Expect=2e-21]; ENSG00000180818, HOXC10, homeobox C10, [RH, Score=94.4, Expect=6e-21]; ENSG00000005073, HOXA11, homeobox A11, [RH, Score=92.8, Expect=2e-20]; ENSG00000128710, HOXD10, homeobox D10, [RH, Score=92.8, Expect=2e-20]} {Mouse: ENSMUSG00000000938, Hoxa10, homeobox A10, [RH, Score=97.8, Expect=5e-22]; ENSMUSG00000042499, Hoxd11, homeobox D11, [RH, Score=95.9, Expect=1e-21]; ENSMUSG00000050328, Hoxc12, homeobox C12, [RH, Score=94.7, Expect=1e-21]; ENSMUSG00000022484, Hoxc10, homeobox C10, [RH, Score=94.4, Expect=5e-21]; ENSMUSG00000001823, Hoxd12, homeobox D12, [RH, Score=94.4, Expect=1e-21]; ENSMUSG00000050368, Hoxd10, homeobox D10, [RH, Score=93.2, Expect=1e-20]} {Dmel: FBgn0000015, Abd-B, Abdominal B, [RH, Score=106, Expect=7e-25]} {Celegans: WBGene00004024, php-3, Posterior Hox gene Paralog, [RH, Score=104, Expect=2e-25]} {Smed: dd_Smed_v6_9061_0_1, dd_Smed_v6_9061_0_1, [RH, Score=132, Expect=2e-34]} {RNA1509_50329} {RNA1310_36793} {RNA815_27715} |
| 9. | MligTC455_34066 | 149 | 3.1 | Mlig455_069292 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_069292 {REF} {Length: 832} {NoTransDecoderORF} {RNA1509_20753} {RNA1310_16791} {RNA815_12674.1} | |
| 10. | MligTC455_48362 | 1815 | 37.8 | Mlig455_053251, Mlig455_065042 | Neo: - Age: - |
CARS | 0.95 | - | - | - | - | 0.950 | - | Mlig455_053251 {REF} {Length: 3222} {TRANSSPLICED} {Pfam: tRNA synthetases class I (C) catalytic domain [PF01406.21, score=402.4]; tRNA synthetases class I (M) [PF09334.13, score=23.9]} {Human: ENSG00000278191, CARS, cysteinyl-tRNA synthetase, [RH, Score=608, Expect=0.0]; ENSG00000110619, CARS, cysteinyl-tRNA synthetase, [RH, Score=608, Expect=0.0]} {Mouse: ENSMUSG00000010755, Cars, cysteinyl-tRNA synthetase, [RH, Score=608, Expect=0.0]} {Dmel: FBgn0027091, CysRS, Cysteinyl-tRNA synthetase, [RH, Score=618, Expect=0.0]} {Celegans: WBGene00000800, cars-1, Cysteinyl Amino-acyl tRNA Synthetase, [RH, Score=536, Expect=1e-180]} {Smed: dd_Smed_v6_3750_0_1, dd_Smed_v6_3750_0_1, [RH, Score=660, Expect=0.0]} {RNA1509_20614, RNA1509_8147} {RNA1310_4882, RNA1509_20614} {RNA1509_20614, RNA815_1598} Mlig455_065042 {REF} {Length: 3135} {TRANSSPLICED} {Pfam: tRNA synthetases class I (C) catalytic domain [PF01406.21, score=400.2]; tRNA synthetases class I (M) [PF09334.13, score=23.5]} {Human: ENSG00000278191, CARS, cysteinyl-tRNA synthetase, [RH, Score=602, Expect=0.0]; ENSG00000110619, CARS, cysteinyl-tRNA synthetase, [RH, Score=602, Expect=0.0]} {Mouse: ENSMUSG00000010755, Cars, cysteinyl-tRNA synthetase, [RH, Score=604, Expect=0.0]} {Dmel: FBgn0027091, CysRS, Cysteinyl-tRNA synthetase, [RH, Score=609, Expect=0.0]} {Celegans: WBGene00000800, cars-1, Cysteinyl Amino-acyl tRNA Synthetase, [RH, Score=539, Expect=0.0]} {Smed: dd_Smed_v6_3750_0_1, dd_Smed_v6_3750_0_1, [RH, Score=663, Expect=0.0]} {RNA1509_13798, RNA1509_45508, RNA1509_8147} {RNA1310_4882, RNA1509_13798, RNA1509_45508, RNA1509_8147} {RNA1509_13798, RNA1509_45508, RNA1509_8147, RNA815_1598} |
Berezikov Lab - 2020-2021 © ERIBA