TomoSeq data search

Data search

Results for MligTC455_27635

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27635

2559

53.31

Mlig455_027648, Mlig455_070950

Neo: -

Age: -

SCRIB

Mlig455_027648 {REF} {Length: 5741} {Pfam: PDZ domain [PF00595.26, score=209.0]; Leucine rich repeat [PF13855.8, score=130.1]; PDZ domain [PF17820.3, score=109.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=100.2]; PDZ domain [PF13180.8, score=66.6]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=22.8]; Tricorn protease PDZ domain [PF14685.8, score=18.5]} {Human: ENSG00000180900, SCRIB, scribbled planar cell polarity protein, [RH, Score=451, Expect=4e-133]; ENSG00000274287, SCRIB, scribbled planar cell polarity protein, [RH, Score=451, Expect=4e-133]; ENSG00000137269, LRRC1, leucine rich repeat containing 1, [RH, Score=436, Expect=2e-138]} {Mouse: ENSMUSG00000022568, Scrib, scribbled planar cell polarity, [RH, Score=449, Expect=5e-133]} {Dmel: FBgn0263289, scrib, scribbled, [RH, Score=465, Expect=3e-136]} {Celegans: WBGene00002632, let-413, [RH, Score=359, Expect=2e-108]} {Smed: dd_Smed_v6_5407_0_1, dd_Smed_v6_5407_0_1, [RH, Score=516, Expect=2e-159]} {RNA1509_41607} {RNA1310_801.1, RNA1509_41607} {RNA1509_41607, RNA815_1751.1}

Mlig455_070950 {REF} {Length: 5285} {Pfam: PDZ domain [PF00595.26, score=209.2]; PDZ domain [PF17820.3, score=109.9]; Leucine rich repeat [PF13855.8, score=91.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=75.1]; PDZ domain [PF13180.8, score=67.1]; Tricorn protease PDZ domain [PF14685.8, score=18.9]} {Human: ENSG00000274287, SCRIB, scribbled planar cell polarity protein, [Score=323, Expect=2e-90]; ENSG00000180900, SCRIB, scribbled planar cell polarity protein, [Score=323, Expect=2e-90]; ENSG00000137269, LRRC1, leucine rich repeat containing 1, [Score=314, Expect=4e-94]} {Mouse: ENSMUSG00000022568, Scrib, scribbled planar cell polarity, [Score=333, Expect=8e-94]} {Dmel: FBgn0263289, scrib, scribbled, [Score=342, Expect=3e-96]} {Celegans: WBGene00002632, let-413, [Score=269, Expect=5e-77]} {Smed: dd_Smed_v6_5407_0_1, dd_Smed_v6_5407_0_1, [Score=375, Expect=4e-109]} {RNA1509_41607} {RNA1310_801.1} {RNA815_1751.1}

Cumulative graph for MligTC455_27635

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.184	5.91	0.81591	1.00000
RegionR2	0.027	5.91	0.94247	1.00000
RegionR3	-0.411	5.91	0.19500	0.73318
RegionR4	0.557	5.91	0.13328	0.37054
RegionR5	0.44	5.91	0.12259	0.35186
RegionR6	-0.001	5.91	0.99711	1.00000
RegionR7	0.149	5.91	0.68961	1.00000
RegionR8	-0.945	5.91	0.09116	0.57070

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.539	5.91	0.59795	1.00000
RegenerationR2	0.264	5.91	0.42324	0.82986
RegenerationR3	0.76	5.91	0.03698	0.34012
RegenerationR4	0.016	5.91	0.96766	1.00000
RegenerationR5	0.185	5.91	0.58923	0.90547
RegenerationR6	0.882	5.91	0.01276	0.13928
RegenerationBL	0.838	5.91	0.02898	0.18922
RegenerationTP	0.419	5.91	0.34793	0.78962

Genes with expression patterns similar to MligTC455_27635

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27635	2559	53.31	Mlig455_027648, Mlig455_070950	Neo: - Age: -	SCRIB	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_027648 {REF} {Length: 5741} {Pfam: PDZ domain [PF00595.26, score=209.0]; Leucine rich repeat [PF13855.8, score=130.1]; PDZ domain [PF17820.3, score=109.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=100.2]; PDZ domain [PF13180.8, score=66.6]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=22.8]; Tricorn protease PDZ domain [PF14685.8, score=18.5]} {Human: ENSG00000180900, SCRIB, scribbled planar cell polarity protein, [RH, Score=451, Expect=4e-133]; ENSG00000274287, SCRIB, scribbled planar cell polarity protein, [RH, Score=451, Expect=4e-133]; ENSG00000137269, LRRC1, leucine rich repeat containing 1, [RH, Score=436, Expect=2e-138]} {Mouse: ENSMUSG00000022568, Scrib, scribbled planar cell polarity, [RH, Score=449, Expect=5e-133]} {Dmel: FBgn0263289, scrib, scribbled, [RH, Score=465, Expect=3e-136]} {Celegans: WBGene00002632, let-413, [RH, Score=359, Expect=2e-108]} {Smed: dd_Smed_v6_5407_0_1, dd_Smed_v6_5407_0_1, [RH, Score=516, Expect=2e-159]} {RNA1509_41607} {RNA1310_801.1, RNA1509_41607} {RNA1509_41607, RNA815_1751.1} Mlig455_070950 {REF} {Length: 5285} {Pfam: PDZ domain [PF00595.26, score=209.2]; PDZ domain [PF17820.3, score=109.9]; Leucine rich repeat [PF13855.8, score=91.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=75.1]; PDZ domain [PF13180.8, score=67.1]; Tricorn protease PDZ domain [PF14685.8, score=18.9]} {Human: ENSG00000274287, SCRIB, scribbled planar cell polarity protein, [Score=323, Expect=2e-90]; ENSG00000180900, SCRIB, scribbled planar cell polarity protein, [Score=323, Expect=2e-90]; ENSG00000137269, LRRC1, leucine rich repeat containing 1, [Score=314, Expect=4e-94]} {Mouse: ENSMUSG00000022568, Scrib, scribbled planar cell polarity, [Score=333, Expect=8e-94]} {Dmel: FBgn0263289, scrib, scribbled, [Score=342, Expect=3e-96]} {Celegans: WBGene00002632, let-413, [Score=269, Expect=5e-77]} {Smed: dd_Smed_v6_5407_0_1, dd_Smed_v6_5407_0_1, [Score=375, Expect=4e-109]} {RNA1509_41607} {RNA1310_801.1} {RNA815_1751.1}
2.	MligTC455_27634	1213	25.27	Mlig455_027633	Neo: - Age: -	SCRIB	5.91	0.992	0.978	0.969	0.995	0.984	0.992	Mlig455_027633 {REF} {Length: 4515} {Pfam: PDZ domain [PF00595.26, score=210.2]; PDZ domain [PF17820.3, score=110.8]; PDZ domain [PF13180.8, score=67.9]; Leucine rich repeat [PF13855.8, score=42.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=34.1]; Tricorn protease PDZ domain [PF14685.8, score=19.6]} {Human: ENSG00000180900, SCRIB, scribbled planar cell polarity protein, [Score=322, Expect=7e-91]; ENSG00000274287, SCRIB, scribbled planar cell polarity protein, [Score=322, Expect=7e-91]} {Mouse: ENSMUSG00000022568, Scrib, scribbled planar cell polarity, [Score=334, Expect=7e-95]} {Dmel: FBgn0263289, scrib, scribbled, [RH, Score=183, Expect=1e-46]} {Celegans: WBGene00002632, let-413, [Score=162, Expect=6e-41]} {Smed: dd_Smed_v6_5407_0_1, dd_Smed_v6_5407_0_1, [Score=332, Expect=3e-95]} {RNA1509_41607} {RNA1310_801.1} {RNA815_1751.1}
3.	MligTC455_53585	369	7.68	Mlig455_034445	Neo: - Age: -	YRDC	1.806	0.841	-	-	-	-	0.965	Mlig455_034445 {REF} {Length: 1952} {Pfam: Telomere recombination [PF01300.20, score=144.6]} {Human: ENSG00000196449, YRDC, yrdC N6-threonylcarbamoyltransferase domain containing, [RH, Score=143, Expect=9e-41]} {Mouse: ENSMUSG00000028889, Yrdc, yrdC domain containing (E.coli), [RH, Score=138, Expect=5e-39]} {Dmel: FBgn0061361, CG33786, [RH, Score=144, Expect=7e-42]} {Celegans: WBGene00012997, Y48C3A.18, [RH, Score=128, Expect=3e-36]} {Smed: dd_Smed_v6_8890_0_1, dd_Smed_v6_8890_0_1, [RH, Score=147, Expect=2e-43]} {RNA1509_7035} {RNA1310_27330} {RNA815_16077.1}
4.	MligTC455_53775	449	9.35	Mlig455_012089	Neo: Int S/G2/M Age: -		1.762	0.802	-	-	-	-	0.960	Mlig455_012089 {REF} {Length: 2012} {NoTransDecoderORF} {RNA1509_35827} {RNA1310_45584} {RNA815_12875}
5.	MligTC455_26928	570	11.87	Mlig455_032950	Neo: - Age: logFC(26M/2M)=-0.353	DNAAF2	1.674	-	-	-	-	0.709	0.965	Mlig455_032950 {REF} {Length: 5987} {TRANSSPLICED} {Pfam: PIH1 N-terminal domain [PF08190.14, score=164.4]; PIH1 CS-like domain [PF18201.3, score=70.8]} {Human: ENSG00000165506, DNAAF2, dynein axonemal assembly factor 2, [RH, Score=208, Expect=8e-56]} {Mouse: ENSMUSG00000020973, Dnaaf2, dynein, axonemal assembly factor 2, [RH, Score=197, Expect=2e-52]} {Dmel: FBgn0033224, Nop17l, Nop17 like, [RH, Score=236, Expect=1e-65]} {Smed: dd_Smed_v6_14336_0_1, dd_Smed_v6_14336_0_1, [RH, Score=310, Expect=9e-94]} {RNA1509_15744, RNA1509_20346, RNA1509_21241} {RNA1310_6945.1, RNA1509_15744, RNA1509_20346, RNA1509_21241} {RNA1509_15744, RNA1509_20346, RNA1509_21241, RNA815_416.1}
6.	MligTC455_52591	1549	32.27	Mlig455_066162	Neo: - Age: -	COPB1	0.986	-	-	-	-	-	0.986	Mlig455_066162 {REF} {Length: 3986} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=361.8]; Coatomer beta subunit appendage platform [PF14806.8, score=189.4]; Coatomer beta C-terminal region [PF07718.14, score=183.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=39.9]; HEAT repeats [PF13646.8, score=30.8]; HEAT repeat [PF02985.24, score=22.5]; HEAT-like repeat [PF13513.8, score=21.1]} {Human: ENSG00000129083, COPB1, coatomer protein complex subunit beta 1, [RH, Score=1321, Expect=0.0]} {Mouse: ENSMUSG00000030754, Copb1, coatomer protein complex, subunit beta 1, [RH, Score=1326, Expect=0.0]} {Dmel: FBgn0008635, betaCOP, Coat Protein (coatomer) beta, [RH, Score=1219, Expect=0.0]} {Celegans: WBGene00021292, copb-1, Coatomer subunit beta, [RH, Score=1103, Expect=0.0]} {Smed: dd_Smed_v6_1208_0_1, dd_Smed_v6_1208_0_1, [RH, Score=1180, Expect=0.0]} {RNA1509_1298} {RNA1310_2383} {RNA815_1794}
7.	MligTC455_28441	1828	38.08	Mlig455_026545	Neo: Int S/G2/M Age: -	PSMA1	0.966	-	-	-	-	-	0.966	Mlig455_026545 {REF} {Length: 1880} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=149.8]; Proteasome subunit A N-terminal signature [PF10584.11, score=45.5]} {Human: ENSG00000129084, PSMA1, proteasome subunit alpha 1, [RH, Score=319, Expect=7e-110]} {Mouse: ENSMUSG00000030751, Psma1, proteasome (prosome, macropain) subunit, alpha type 1, [RH, Score=320, Expect=2e-110]} {Dmel: FBgn0250843, Prosalpha6, Proteasome alpha6 subunit, [RH, Score=259, Expect=2e-86]} {Celegans: WBGene00003927, pas-6, Proteasome subunit alpha type-1, [RH, Score=264, Expect=1e-88]} {Smed: dd_Smed_v6_1278_0_1, dd_Smed_v6_1278_0_1, [RH, Score=303, Expect=1e-103]} {RNA1509_55782, RNA1509_6111} {RNA1310_15113.1, RNA1509_55782, RNA1509_6111} {RNA1509_55782, RNA1509_6111, RNA815_6382}
8.	MligTC455_52265	1296	27	Mlig455_059821	Neo: - Age: Up-Down-Down Region-enriched R4: 1.900/0.04444	OGT	0.965	-	-	-	-	-	0.965	Mlig455_059821 {REF} {Length: 4868} {Pfam: Glycosyl transferase family 41 [PF13844.8, score=851.9]; TPR repeat [PF13414.8, score=290.0]; Tetratricopeptide repeat [PF00515.30, score=278.5]; Tetratricopeptide repeat [PF07719.19, score=209.9]; Tetratricopeptide repeat [PF13181.8, score=187.7]; Tetratricopeptide repeat [PF13431.8, score=180.9]; Tetratricopeptide repeat [PF13424.8, score=140.9]; Tetratricopeptide repeat [PF13428.8, score=128.1]; Tetratricopeptide repeat [PF14559.8, score=126.0]; Tetratricopeptide repeat [PF13432.8, score=125.4]; Tetratricopeptide repeat [PF13176.8, score=111.4]; Tetratricopeptide repeat [PF13374.8, score=101.1]; Tetratricopeptide repeat [PF13174.8, score=56.5]; Tetratricopeptide repeat [PF13371.8, score=51.3]; Tetratricopeptide repeat [PF07721.16, score=49.0]; NMDA receptor-regulated protein 1 [PF12569.10, score=48.8]; MalT-like TPR region [PF17874.3, score=37.8]; Tetratricopeptide repeat-like domain [PF09976.11, score=33.3]; Tetratricopeptide repeat [PF13429.8, score=31.1]; FAT domain [PF02259.25, score=24.8]; Bacterial transcriptional activator domain [PF03704.19, score=20.0]; Tetratricopeptide repeat [PF07720.14, score=19.3]} {Human: ENSG00000147162, OGT, O-linked N-acetylglucosamine (GlcNAc) transferase, [RH, Score=1468, Expect=0.0]} {Mouse: ENSMUSG00000034160, Ogt, O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase), [RH, Score=1469, Expect=0.0]} {Dmel: FBgn0261403, sxc, super sex combs, [RH, Score=1455, Expect=0.0]} {Celegans: WBGene00003858, ogt-1, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, [RH, Score=1300, Expect=0.0]} {Smed: dd_Smed_v6_2939_0_1, dd_Smed_v6_2939_0_1, [RH, Score=1328, Expect=0.0]} {RNA1509_35758, RNA1509_50473, RNA1509_5638} {RNA1310_2994, RNA1509_35758, RNA1509_50473, RNA1509_5638} {RNA1509_35758, RNA1509_50473, RNA1509_5638, RNA815_1451}
9.	MligTC455_42843	1252	26.09	Mlig455_005842	Neo: - Age: -	SFXN2	0.961	-	-	-	-	-	0.961	Mlig455_005842 {REF} {Length: 2221} {TRANSSPLICED} {Pfam: Sideroflexins [PF03820.19, score=398.1]} {Human: ENSG00000156398, SFXN2, sideroflexin 2, [RH, Score=311, Expect=8e-105]} {Mouse: ENSMUSG00000025036, Sfxn2, sideroflexin 2, [RH, Score=315, Expect=8e-107]} {Dmel: FBgn0036843, Sfxn2, Sideroflexin 2, [RH, Score=332, Expect=2e-113]} {Celegans: WBGene00015777, sfxn-2, Sideroflexin, [RH, Score=310, Expect=6e-105]} {Smed: dd_Smed_v6_12292_0_1, dd_Smed_v6_12292_0_1, [Score=271, Expect=2e-89]} {RNA1509_27974, RNA1509_37570, RNA1509_39191, RNA1509_51512} {RNA1310_15177, RNA1509_27974, RNA1509_37570, RNA1509_39191, RNA1509_51512} {RNA1509_27974, RNA1509_37570, RNA1509_39191, RNA1509_51512, RNA815_6174.1}
10.	MligTC455_35403	638	13.28	Mlig455_065741	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.314	NEBL	0.955	-	-	0.955	-	-	-	Mlig455_065741 {REF} {Length: 3515} {Pfam: Nebulin repeat [PF00880.20, score=59.6]; Variant SH3 domain [PF14604.8, score=50.0]; LIM domain [PF00412.24, score=47.2]; SH3 domain [PF00018.30, score=45.2]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=25.9]; Variant SH3 domain [PF07653.19, score=19.6]} {Human: ENSG00000078114, NEBL, nebulette, [RH, Score=195, Expect=2e-60]} {Mouse: ENSMUSG00000038366, Lasp1, LIM and SH3 protein 1, [RH, Score=187, Expect=1e-57]} {Dmel: FBgn0063485, Lasp, [RH, Score=190, Expect=6e-55]} {Celegans: WBGene00018367, F42H10.3, LIM and SH3 domain protein F42H10.3, [RH, Score=170, Expect=2e-50]} {Smed: dd_Smed_v6_1218_0_1, dd_Smed_v6_1218_0_1, [RH, Score=119, Expect=3e-32]} {RNA1509_40794} {RNA1310_6041.1, RNA1509_40794} {RNA1509_40794, RNA815_19941}
11.	MligTC455_18201	2066	43.04	Mlig455_012852	Neo: - Age: logFC(26M/2M)=-0.426	TSGA10	0.953	-	-	0.953	-	-	-	Mlig455_012852 {REF} {Length: 3652} {TRANSSPLICED} {Pfam: Takusan [PF04822.15, score=19.1]} {Human: ENSG00000135951, TSGA10, testis specific 10, [Score=167, Expect=1e-42]; ENSG00000174799, CEP135, centrosomal protein 135, [Score=159, Expect=4e-39]} {Mouse: ENSMUSG00000036403, Cep135, centrosomal protein 135, [Score=163, Expect=1e-40]; ENSMUSG00000060771, Tsga10, testis specific 10, [Score=157, Expect=2e-39]} {Dmel: FBgn0036480, Cep135, Centrosomal protein 135kDa, [Score=51.2, Expect=5e-06]} {Smed: dd_Smed_v6_5218_0_1, dd_Smed_v6_5218_0_1, [Score=177, Expect=1e-45]} {RNA1509_8974} {RNA1310_4398.1, RNA1509_8974} {RNA1509_8974, RNA815_1443.1}
12.	MligTC455_47404	1599	33.3	Mlig455_039717	Neo: - Age: -	SLC6A5	0.953	-	-	-	-	-	0.953	Mlig455_039717 {REF} {Length: 3757} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=640.0]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=537, Expect=0.0]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=539, Expect=0.0]} {Dmel: FBgn0034911, CG5549, [Score=487, Expect=3e-158]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=425, Expect=6e-141]} {Smed: dd_Smed_v6_4290_0_1, dd_Smed_v6_4290_0_1, [Score=500, Expect=2e-170]} {RNA1509_18905, RNA1509_26145, RNA1509_32273, RNA1509_5227} {RNA1310_4097.1, RNA1509_18905, RNA1509_26145, RNA1509_32273, RNA1509_5227} {RNA1509_18905, RNA1509_26145, RNA1509_32273, RNA1509_5227, RNA815_1072.1}
13.	MligTC455_25035	876	18.25	Mlig455_066061	Neo: - Age: -		0.951	0.951	-	-	-	-	-	Mlig455_066061 {REF} {Length: 2528} {TRANSSPLICED} {Smed: dd_Smed_v6_7269_0_2, dd_Smed_v6_7269_0_2, [Score=62.8, Expect=3e-10]} {RNA1509_10376, RNA1509_32336} {RNA1310_6848.1, RNA1509_10376, RNA1509_32336} {RNA1509_10376, RNA1509_32336, RNA815_13828}
14.	MligTC455_25034	895	18.65	Mlig455_007748	Neo: - Age: -		0.95	0.950	-	-	-	-	-	Mlig455_007748 {REF} {Length: 2518} {TRANSSPLICED} {Smed: dd_Smed_v6_7269_0_1, dd_Smed_v6_7269_0_1, [Score=62.8, Expect=3e-10]} {RNA1509_32336} {RNA1310_6848.1} {RNA815_13828}

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