TomoSeq data search

Data search

Results for MligTC455_27640

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27640

694

14.46

Mlig455_031972

Neo: -

Age: -

Region-enriched R4: 2.721/0.00007
Region-enriched R5: 2.444/0.00000

ATL2

Mlig455_031972 {REF} {Length: 3845} {TRANSSPLICED} {Pfam: Guanylate-binding protein, N-terminal domain [PF02263.21, score=282.2]} {Human: ENSG00000119787, ATL2, atlastin GTPase 2, [RH, Score=581, Expect=0.0]; ENSG00000198513, ATL1, atlastin GTPase 1, [RH, Score=570, Expect=0.0]} {Mouse: ENSMUSG00000059811, Atl2, atlastin GTPase 2, [RH, Score=577, Expect=0.0]; ENSMUSG00000021066, Atl1, atlastin GTPase 1, [RH, Score=567, Expect=0.0]} {Dmel: FBgn0039213, atl, atlastin, [RH, Score=576, Expect=0.0]} {Celegans: WBGene00021868, atln-1, ATLastiN (Endoplasmic reticulum GTPase) related; Putative guanylate-binding protein, [RH, Score=579, Expect=0.0]} {Smed: dd_Smed_v6_4450_0_1, dd_Smed_v6_4450_0_1, [RH, Score=381, Expect=1e-126]} {RNA1509_3860} {RNA1310_7661, RNA1509_3860} {RNA1509_3860, RNA815_2605}

Cumulative graph for MligTC455_27640

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.043	4.302	0.12333	0.71725
RegionR2	0.443	4.302	0.61303	0.95994
RegionR3	1.589	4.302	0.00581	0.10575
RegionR4	2.721	4.302	0.00000	0.00007
RegionR5	2.444	4.302	0.00000	0.00000
RegionR6	1.273	4.302	0.05128	0.42414
RegionR7	-1.757	4.302	0.99804	1.00000
RegionR8	-0.669	4.302	0.96979	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	7.628	4.302	0.02407	0.59347
RegenerationR2	-0.132	4.302	0.71541	0.96205
RegenerationR3	-0.521	4.302	0.16021	0.59296
RegenerationR4	-0.309	4.302	0.41942	0.82564
RegenerationR5	-0.312	4.302	0.33507	0.75460
RegenerationR6	-0.126	4.302	0.74381	0.94926
RegenerationBL	0.579	4.302	0.39420	0.76293
RegenerationTP	1.398	4.302	0.05924	0.39428

Genes with expression patterns similar to MligTC455_27640

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27640	694	14.46	Mlig455_031972	Neo: - Age: - Region-enriched R4: 2.721/0.00007 Region-enriched R5: 2.444/0.00000	ATL2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_031972 {REF} {Length: 3845} {TRANSSPLICED} {Pfam: Guanylate-binding protein, N-terminal domain [PF02263.21, score=282.2]} {Human: ENSG00000119787, ATL2, atlastin GTPase 2, [RH, Score=581, Expect=0.0]; ENSG00000198513, ATL1, atlastin GTPase 1, [RH, Score=570, Expect=0.0]} {Mouse: ENSMUSG00000059811, Atl2, atlastin GTPase 2, [RH, Score=577, Expect=0.0]; ENSMUSG00000021066, Atl1, atlastin GTPase 1, [RH, Score=567, Expect=0.0]} {Dmel: FBgn0039213, atl, atlastin, [RH, Score=576, Expect=0.0]} {Celegans: WBGene00021868, atln-1, ATLastiN (Endoplasmic reticulum GTPase) related; Putative guanylate-binding protein, [RH, Score=579, Expect=0.0]} {Smed: dd_Smed_v6_4450_0_1, dd_Smed_v6_4450_0_1, [RH, Score=381, Expect=1e-126]} {RNA1509_3860} {RNA1310_7661, RNA1509_3860} {RNA1509_3860, RNA815_2605}
2.	MligTC455_23778	194	4.05	Mlig455_003567	Neo: - Age: -	TARBP1	2.433	-	0.748	-	0.958	-	0.727	Mlig455_003567 {REF} {Length: 6230} {TRANSSPLICED} {Pfam: SpoU rRNA Methylase family [PF00588.21, score=94.9]} {Human: ENSG00000059588, TARBP1, TAR (HIV-1) RNA binding protein 1, [RH, Score=221, Expect=2e-57]} {Mouse: ENSMUSG00000090290, Tarbp1, TAR RNA binding protein 1, [RH, Score=224, Expect=1e-58]} {Dmel: FBgn0038953, CG18596, [RH, Score=134, Expect=5e-31]} {Celegans: WBGene00020498, T14B4.1, [RH, Score=131, Expect=3e-30]} {Smed: dd_Smed_v6_12000_0_1, dd_Smed_v6_12000_0_1, [RH, Score=247, Expect=2e-66]} {RNA1509_21042} {RNA1310_1515, RNA1509_21042} {RNA1509_21042, RNA815_9259}
3.	MligTC455_46300	592	12.33	Mlig455_029207	Neo: Int S/G2/M Age: - Region-enriched R5: 1.553/0.00026		1.733	-	0.780	0.953	-	-	-	Mlig455_029207 {REF} {Length: 1314} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_30245, RNA1509_35999, RNA1509_52366} {RNA1310_3145, RNA1509_30245, RNA1509_35999, RNA1509_52366} {RNA1509_30245, RNA1509_35999, RNA1509_52366, RNA815_27045}
4.	MligTC455_26502	510	10.62	Mlig455_049569	Neo: - Age: - Region-enriched R5: 1.399/0.00231	NFX1	1.689	-	-	-	-	0.958	0.731	Mlig455_049569 {REF} {Length: 3854} {TRANSSPLICED} {Pfam: NF-X1 type zinc finger [PF01422.19, score=40.6]; R3H domain [PF01424.24, score=21.6]} {Human: ENSG00000086102, NFX1, nuclear transcription factor, X-box binding 1, [RH, Score=545, Expect=1e-176]} {Mouse: ENSMUSG00000028423, Nfx1, nuclear transcription factor, X-box binding 1, [RH, Score=534, Expect=1e-172]} {Dmel: FBgn0001978, stc, shuttle craft, [RH, Score=473, Expect=2e-149]} {Celegans: WBGene00007048, nfx-1, Transcriptional repressor NF-X1 homolog, [RH, Score=468, Expect=1e-147]} {Smed: dd_Smed_v6_4795_0_1, dd_Smed_v6_4795_0_1, [RH, Score=408, Expect=1e-126]} {RNA1509_5938} {RNA1310_3865.1} {RNA815_4979}
5.	MligTC455_24977	13312	277.34	Mlig455_018857	Neo: Int S/G2/M Age: -	RPL35A	0.967	-	-	-	-	0.967	-	Mlig455_018857 {REF} {Length: 511} {TRANSSPLICED} {Pfam: Ribosomal protein L35Ae [PF01247.20, score=145.7]} {Human: ENSG00000182899, RPL35A, ribosomal protein L35a, [RH, Score=151, Expect=4e-48]} {Mouse: ENSMUSG00000060636, Rpl35a, ribosomal protein L35A, [RH, Score=152, Expect=2e-48]} {Dmel: FBgn0037328, RpL35A, Ribosomal protein L35A, [RH, Score=155, Expect=1e-49]} {Celegans: WBGene00004447, rpl-33, 60S ribosomal protein L35a, [RH, Score=139, Expect=9e-44]} {Smed: dd_Smed_v6_318_0_1, dd_Smed_v6_318_0_1, [RH, Score=154, Expect=2e-49]} {RNA1509_20915} {RNA1310_35465} {RNA815_35386}
6.	MligTC455_24976	13333	277.77	Mlig455_018655	Neo: - Age: logFC(26M/2M)=0.335	RPL35A	0.966	-	-	-	-	0.966	-	Mlig455_018655 {REF} {Length: 512} {TRANSSPLICED} {Pfam: Ribosomal protein L35Ae [PF01247.20, score=148.2]; RimM N-terminal domain [PF01782.20, score=20.4]} {Human: ENSG00000182899, RPL35A, ribosomal protein L35a, [RH, Score=153, Expect=6e-49]} {Mouse: ENSMUSG00000060636, Rpl35a, ribosomal protein L35A, [RH, Score=154, Expect=2e-49]} {Dmel: FBgn0037328, RpL35A, Ribosomal protein L35A, [RH, Score=155, Expect=2e-49]} {Celegans: WBGene00004447, rpl-33, 60S ribosomal protein L35a, [RH, Score=144, Expect=2e-45]} {Smed: dd_Smed_v6_318_0_1, dd_Smed_v6_318_0_1, [RH, Score=158, Expect=4e-51]} {RNA1509_20915, RNA1509_2998, RNA1509_595} {RNA1310_35465, RNA1509_20915, RNA1509_2998, RNA1509_595} {RNA1509_20915, RNA1509_2998, RNA1509_595, RNA815_35386}
7.	MligTC455_33032	534	11.12	Mlig455_068100	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_068100 {REF} {Length: 4924} {RNA1509_40038} {RNA1310_2639.1} {RNA815_10981}
8.	MligTC455_23228	1772	36.92	Mlig455_004555	Neo: - Age: - Region-enriched R3: 1.605/0.00005		0.955	-	-	-	-	0.955	-	Mlig455_004555 {REF} {Length: 1688} {TRANSSPLICED} {RNA1509_12452, RNA1509_28256} {RNA1310_32627, RNA1509_12452} {RNA1509_12452, RNA815_16896}
9.	MligTC455_26035	785	16.35	Mlig455_059000	Neo: - Age: - Region-enriched R5: 1.545/0.02057	GPT2	0.955	-	-	-	-	-	0.955	Mlig455_059000 {REF} {Length: 1739} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=127.2]} {Human: ENSG00000166123, GPT2, glutamic--pyruvic transaminase 2, [Score=471, Expect=2e-163]} {Mouse: ENSMUSG00000031700, Gpt2, glutamic pyruvate transaminase (alanine aminotransferase) 2, [Score=471, Expect=2e-163]; ENSMUSG00000022546, Gpt, glutamic pyruvic transaminase, soluble, [Score=464, Expect=3e-161]} {Dmel: FBgn0030478, CG1640, [Score=429, Expect=1e-146]} {Celegans: WBGene00016333, C32F10.8, [Score=431, Expect=3e-148]} {Smed: dd_Smed_v6_2988_0_1, dd_Smed_v6_2988_0_1, [Score=492, Expect=6e-173]} {RNA1509_20662, RNA1509_39983, RNA1509_58948} {RNA1310_12775, RNA1509_20662, RNA1509_39983, RNA1509_58948} {RNA1509_20662, RNA1509_39983, RNA1509_58948, RNA815_4235.2}
10.	MligTC455_32444	279	5.81	Mlig455_063483	Neo: - Age: -	MANBA	0.951	-	-	-	0.951	-	-	Mlig455_063483 {REF} {Length: 3695} {Pfam: Glycosyl hydrolases family 2 [PF00703.23, score=22.7]; Glycosyl hydrolases family 2, sugar binding domain [PF02837.20, score=20.4]} {Human: ENSG00000109323, MANBA, mannosidase beta, [RH, Score=462, Expect=2e-147]} {Mouse: ENSMUSG00000028164, Manba, mannosidase, beta A, lysosomal, [RH, Score=466, Expect=2e-149]} {Dmel: FBgn0037215, beta-Man, beta-Mannosidase, [RH, Score=377, Expect=1e-115]} {Celegans: WBGene00007904, C33G3.4, Probable beta-mannosidase, [RH, Score=396, Expect=5e-123]} {Smed: dd_Smed_v6_3209_0_1, dd_Smed_v6_3209_0_1, [RH, Score=368, Expect=2e-112]} {RNA1509_27646, RNA1509_41233} {RNA1310_1571.1, RNA1509_27646, RNA1509_41233} {RNA1509_27646, RNA1509_41233, RNA815_798.1}

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