Data search
Results for MligTC455_27654
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27654 | 366 | 7.62 | Mlig455_003438 | Neo: - Age: - |
TUBA1C | Mlig455_003438 {REF} {Length: 2147} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=226.8]; Tubulin C-terminal domain [PF03953.19, score=178.4]; Tubulin domain [PF14881.8, score=19.0]} {Human: ENSG00000167553, TUBA1C, tubulin alpha 1c, [RH, Score=870, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin alpha 4a, [RH, Score=857, Expect=0.0]} {Mouse: ENSMUSG00000026202, Tuba4a, tubulin, alpha 4A, [RH, Score=857, Expect=0.0]} {Dmel: FBgn0003886, alphaTub85E, alpha-Tubulin at 85E, [RH, Score=860, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=839, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_1, dd_Smed_v6_10947_0_1, [RH, Score=835, Expect=0.0]} {RNA1509_9718} {RNA1310_10339.1} {RNA815_1715.1} |
Cumulative graph for MligTC455_27654
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.832 | 3.274 | 0.60112 | 1.00000 | |
| RegionR2 | -0.174 | 3.274 | 0.74579 | 1.00000 | |
| RegionR3 | -0.13 | 3.274 | 0.75964 | 1.00000 | |
| RegionR4 | -0.671 | 3.274 | 0.23635 | 0.53109 | |
| RegionR5 | -1.556 | 3.274 | 0.00137 | 0.01313 | |
| RegionR6 | -0.393 | 3.274 | 0.38849 | 0.96412 | |
| RegionR7 | 1.247 | 3.274 | 0.02094 | 0.26952 | |
| RegionR8 | 0.845 | 3.274 | 0.29578 | 0.92508 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.681 | 3.274 | 0.43296 | 1.00000 | |
| RegenerationR2 | -0.598 | 3.274 | 0.13135 | 0.55708 | |
| RegenerationR3 | -0.674 | 3.274 | 0.14605 | 0.57314 | |
| RegenerationR4 | -0.201 | 3.274 | 0.68599 | 0.94752 | |
| RegenerationR5 | 0.546 | 3.274 | 0.24324 | 0.67660 | |
| RegenerationR6 | 0.135 | 3.274 | 0.78000 | 0.96762 | |
| RegenerationBL | -0.345 | 3.274 | 0.52490 | 0.88571 | |
| RegenerationTP | -1.4 | 3.274 | 0.03563 | 0.31508 |
Genes with expression patterns similar to MligTC455_27654
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27654 | 366 | 7.62 | Mlig455_003438 | Neo: - Age: - |
TUBA1C | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_003438 {REF} {Length: 2147} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=226.8]; Tubulin C-terminal domain [PF03953.19, score=178.4]; Tubulin domain [PF14881.8, score=19.0]} {Human: ENSG00000167553, TUBA1C, tubulin alpha 1c, [RH, Score=870, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin alpha 4a, [RH, Score=857, Expect=0.0]} {Mouse: ENSMUSG00000026202, Tuba4a, tubulin, alpha 4A, [RH, Score=857, Expect=0.0]} {Dmel: FBgn0003886, alphaTub85E, alpha-Tubulin at 85E, [RH, Score=860, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=839, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_1, dd_Smed_v6_10947_0_1, [RH, Score=835, Expect=0.0]} {RNA1509_9718} {RNA1310_10339.1} {RNA815_1715.1} |
| 2. | MligTC455_38382 | 100 | 2.07 | Mlig455_061731 | Neo: - Age: Up-Down-Down |
LAMA5 | 1.829 | - | - | 0.859 | - | 0.970 | - | Mlig455_061731 {REF} {Length: 11591} {Pfam: Laminin EGF domain [PF00053.26, score=421.1]; Laminin N-terminal (Domain VI) [PF00055.19, score=142.3]; Laminin G domain [PF02210.26, score=109.8]; Laminin G domain [PF00054.25, score=101.4]; Laminin B (Domain IV) [PF00052.20, score=25.1]} {Human: ENSG00000130702, LAMA5, laminin subunit alpha 5, [RH, Score=1028, Expect=0.0]} {Mouse: ENSMUSG00000015647, Lama5, laminin, alpha 5, [RH, Score=1037, Expect=0.0]} {Dmel: FBgn0002526, LanA, Laminin A, [RH, Score=1064, Expect=0.0]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [RH, Score=1043, Expect=0.0]} {Smed: dd_Smed_v6_7359_0_1, dd_Smed_v6_7359_0_1, [Score=289, Expect=3e-78]} {RNA1509_9236} {RNA1310_6197} {RNA815_10942} |
| 3. | MligTC455_25792 | 1420 | 29.58 | Mlig455_016342, Mlig455_020876, Mlig455_036482, Mlig455_060659, Mlig455_068395 | Neo: - Age: - Region-enriched R7: 1.712/0.01745 |
1.678 | - | - | - | - | 0.718 | 0.960 | Mlig455_016342 {REF} {Length: 850} {RNA1509_22707} {RNA1310_33596.1} {RNA815_24119.1} Mlig455_020876 {REF} {Length: 1066} {RNA1509_22707} {RNA1310_33252.1} {RNA815_24119.1} Mlig455_036482 {REF} {Length: 786} {RNA1509_22707} {RNA1310_15800} {RNA815_24119.1} Mlig455_060659 {REF} {Length: 1236} {RNA1509_22707} {RNA1310_33252.1} {RNA815_24119.1} Mlig455_068395 {REF} {Length: 354} {NoTransDecoderORF} {RNA1509_22707} {RNA1310_90313} {RNA815_24119.1} |
|
| 4. | MligTC455_29652 | 147 | 3.07 | Mlig455_009103 | Neo: - Age: - |
DCTN4 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_009103 {REF} {Length: 4973} {Pfam: Dynactin p62 family [PF05502.15, score=116.8]} {Human: ENSG00000132912, DCTN4, dynactin subunit 4, [RH, Score=284, Expect=2e-90]} {Mouse: ENSMUSG00000024603, Dctn4, dynactin 4, [RH, Score=280, Expect=2e-89]} {Dmel: FBgn0033206, DCTN4-p62, Dynactin 4, p62 subunit, [RH, Score=192, Expect=2e-55]} {Celegans: WBGene00016124, dnc-4, DyNactin Complex component, [RH, Score=132, Expect=4e-34]} {Smed: dd_Smed_v6_3600_0_1, dd_Smed_v6_3600_0_1, [RH, Score=269, Expect=2e-85]} {RNA1509_25756} {RNA1310_9867.1} {RNA815_13000.1} |
| 5. | MligTC455_25974 | 1371 | 28.56 | Mlig455_009168 | Neo: - Age: - |
0.961 | - | - | - | - | - | 0.961 | Mlig455_009168 {REF} {Length: 2726} {RNA1509_19384} {RNA1310_17198.1} {RNA815_4182} | |
| 6. | MligTC455_19176 | 183 | 3.82 | Mlig455_060775 | Neo: - Age: Up-Down-Down |
ARHGEF17 | 0.96 | - | - | 0.960 | - | - | - | Mlig455_060775 {REF} {Length: 7482} {Pfam: RhoGEF domain [PF00621.22, score=140.8]; WD40 repeated domain [PF19056.2, score=130.9]} {Human: ENSG00000110237, ARHGEF17, Rho guanine nucleotide exchange factor 17, [RH, Score=297, Expect=2e-80]} {Mouse: ENSMUSG00000032875, Arhgef17, Rho guanine nucleotide exchange factor (GEF) 17, [RH, Score=293, Expect=1e-79]} {Dmel: FBgn0262562, CG43102, [Score=286, Expect=2e-77]} {Celegans: WBGene00019832, osg-1, Rho guanine nucleotide exchange factor osg-1, [RH, Score=247, Expect=2e-66]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=393, Expect=3e-112]} {RNA1509_22924, RNA1509_31174} {RNA1310_12203, RNA1509_22924} {RNA1509_22924, RNA815_9179} |
| 7. | MligTC455_31832 | 387 | 8.06 | Mlig455_016110 | Neo: - Age: Down-Up-Down |
RNF11 | 0.96 | 0.960 | - | - | - | - | - | Mlig455_016110 {REF} {Length: 6352} {Pfam: Ring finger domain [PF13639.8, score=46.9]; RING-like zinc finger [PF17123.7, score=41.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=31.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.6]; RING-type zinc-finger [PF13445.8, score=30.2]; RING-H2 zinc finger domain [PF12678.9, score=28.4]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.4]; zinc-RING finger domain [PF14634.8, score=26.9]; Prokaryotic RING finger family 4 [PF14447.8, score=21.8]; Zinc-ribbon, C4HC2 type [PF17120.7, score=21.6]} {Human: ENSG00000123091, RNF11, ring finger protein 11, [Score=92.4, Expect=6e-25]} {Mouse: ENSMUSG00000028557, Rnf11, ring finger protein 11, [Score=92.4, Expect=4e-25]} {Dmel: FBgn0052850, CG32850, [Score=81.3, Expect=5e-21]} {Celegans: WBGene00007226, C01G6.4, [Score=84.7, Expect=4e-22]} {Smed: dd_Smed_v6_6913_0_1, dd_Smed_v6_6913_0_1, [Score=87.4, Expect=1e-22]} {RNA1509_26990} {RNA1310_6256} {RNA815_10502} |
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