Data search
Results for MligTC455_27666
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27666 | 2631 | 54.81 | Mlig455_018405 | Neo: - Age: logFC(26M/2M)=-2.286 |
TUBA3C | Mlig455_018405 {REF} {Length: 1570} {Pfam: Tubulin C-terminal domain [PF03953.19, score=135.4]; Tubulin/FtsZ family, GTPase domain [PF00091.27, score=123.0]} {Human: ENSG00000198033, TUBA3C, tubulin alpha 3c, [Score=611, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [Score=611, Expect=0.0]; ENSG00000167553, TUBA1C, tubulin alpha 1c, [Score=608, Expect=0.0]; ENSG00000167552, TUBA1A, tubulin alpha 1a, [Score=605, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [Score=602, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin alpha 4a, [Score=599, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [Score=597, Expect=0.0]; ENSG00000183785, TUBA8, tubulin alpha 8, [Score=588, Expect=0.0]} {Mouse: ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [Score=611, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [Score=611, Expect=0.0]; ENSMUSG00000043091, Tuba1c, tubulin, alpha 1C, [Score=608, Expect=0.0]; ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [Score=605, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [Score=602, Expect=0.0]; ENSMUSG00000026202, Tuba4a, tubulin, alpha 4A, [Score=599, Expect=0.0]; ENSMUSG00000030137, Tuba8, tubulin, alpha 8, [Score=586, Expect=0.0]} {Dmel: FBgn0003884, alphaTub84B, alpha-Tubulin at 84B, [Score=606, Expect=0.0]} {Celegans: WBGene00006529, tba-2, Tubulin alpha-2 chain, [Score=567, Expect=0.0]} {Smed: dd_Smed_v6_38_0_1, dd_Smed_v6_38_0_1, [Score=608, Expect=0.0]} {RNA1509_1706} {RNA1310_7151.1} {RNA815_1715.1} |
Cumulative graph for MligTC455_27666
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.074 | 5.802 | 0.14943 | 0.76385 | |
| RegionR2 | -0.096 | 5.802 | 0.85879 | 1.00000 | |
| RegionR3 | 0.266 | 5.802 | 0.56240 | 1.00000 | |
| RegionR4 | 1.053 | 5.802 | 0.04544 | 0.18081 | |
| RegionR5 | 0.186 | 5.802 | 0.68776 | 1.00000 | |
| RegionR6 | -0.059 | 5.802 | 0.90295 | 1.00000 | |
| RegionR7 | -0.8 | 5.802 | 0.16192 | 0.74369 | |
| RegionR8 | -1.625 | 5.802 | 0.02517 | 0.30950 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.62 | 5.802 | 0.49400 | 1.00000 | |
| RegenerationR2 | 1.569 | 5.802 | 0.00538 | 0.11585 | |
| RegenerationR3 | 1.242 | 5.802 | 0.03338 | 0.32501 | |
| RegenerationR4 | 1.163 | 5.802 | 0.04957 | 0.35888 | |
| RegenerationR5 | 0.644 | 5.802 | 0.26310 | 0.69466 | |
| RegenerationR6 | 0.827 | 5.802 | 0.15849 | 0.48621 | |
| RegenerationBL | 0.663 | 5.802 | 0.24444 | 0.59861 | |
| RegenerationTP | 0.974 | 5.802 | 0.12509 | 0.53552 |
Genes with expression patterns similar to MligTC455_27666
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27666 | 2631 | 54.81 | Mlig455_018405 | Neo: - Age: logFC(26M/2M)=-2.286 |
TUBA3C | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018405 {REF} {Length: 1570} {Pfam: Tubulin C-terminal domain [PF03953.19, score=135.4]; Tubulin/FtsZ family, GTPase domain [PF00091.27, score=123.0]} {Human: ENSG00000198033, TUBA3C, tubulin alpha 3c, [Score=611, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [Score=611, Expect=0.0]; ENSG00000167553, TUBA1C, tubulin alpha 1c, [Score=608, Expect=0.0]; ENSG00000167552, TUBA1A, tubulin alpha 1a, [Score=605, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [Score=602, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin alpha 4a, [Score=599, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [Score=597, Expect=0.0]; ENSG00000183785, TUBA8, tubulin alpha 8, [Score=588, Expect=0.0]} {Mouse: ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [Score=611, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [Score=611, Expect=0.0]; ENSMUSG00000043091, Tuba1c, tubulin, alpha 1C, [Score=608, Expect=0.0]; ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [Score=605, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [Score=602, Expect=0.0]; ENSMUSG00000026202, Tuba4a, tubulin, alpha 4A, [Score=599, Expect=0.0]; ENSMUSG00000030137, Tuba8, tubulin, alpha 8, [Score=586, Expect=0.0]} {Dmel: FBgn0003884, alphaTub84B, alpha-Tubulin at 84B, [Score=606, Expect=0.0]} {Celegans: WBGene00006529, tba-2, Tubulin alpha-2 chain, [Score=567, Expect=0.0]} {Smed: dd_Smed_v6_38_0_1, dd_Smed_v6_38_0_1, [Score=608, Expect=0.0]} {RNA1509_1706} {RNA1310_7151.1} {RNA815_1715.1} |
| 2. | MligTC455_40317 | 4609 | 96.01 | Mlig455_036498 | Neo: - Age: logFC(26M/2M)=-0.220 |
LRRC23 | 2.651 | - | - | 0.954 | - | 0.794 | 0.903 | Mlig455_036498 {REF} {Length: 1452} {TRANSSPLICED} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=98.6]; Leucine-rich repeat [PF14580.8, score=60.6]; Leucine rich repeat [PF13855.8, score=58.7]; Leucine Rich repeat [PF13516.8, score=38.0]; Leucine Rich Repeat [PF00560.35, score=23.0]} {Human: ENSG00000010626, LRRC23, leucine rich repeat containing 23, [RH, Score=288, Expect=4e-95]} {Mouse: ENSMUSG00000030125, Lrrc23, leucine rich repeat containing 23, [RH, Score=321, Expect=2e-108]} {Dmel: FBgn0085440, Lgr4, Leucine-rich repeat-containing G protein-coupled receptor 4, [Score=54.3, Expect=1e-07]} {Celegans: WBGene00015516, C06A8.6, [Score=102, Expect=1e-24]} {Smed: dd_Smed_v6_8299_0_1, dd_Smed_v6_8299_0_1, [RH, Score=286, Expect=1e-94]} {RNA1509_19139, RNA1509_2421, RNA1509_28075, RNA1509_7420} {RNA1310_22202.1, RNA1509_19139, RNA1509_2421, RNA1509_28075, RNA1509_7420} {RNA1509_19139, RNA1509_2421, RNA1509_28075, RNA1509_7420, RNA815_8780.1} |
| 3. | MligTC455_28498 | 3378 | 70.37 | Mlig455_056160, Mlig455_058741 | Neo: - |
NPHP1 | 1.805 | - | - | 0.950 | - | - | 0.855 | Mlig455_056160 {REF} {Length: 3355} {RNA1509_3623} {RNA1310_2702} {RNA815_1647} Mlig455_058741 {REF} {Length: 4029} {Pfam: SH3 domain [PF00018.30, score=32.1]; Variant SH3 domain [PF14604.8, score=31.1]; Variant SH3 domain [PF07653.19, score=31.0]} {Human: ENSG00000144061, NPHP1, nephrocystin 1, [RH, Score=227, Expect=2e-62]} {Mouse: ENSMUSG00000027378, Nphp1, nephronophthisis 1 (juvenile) homolog (human), [RH, Score=221, Expect=2e-60]} {Smed: dd_Smed_v6_9990_0_2, dd_Smed_v6_9990_0_2, [Score=211, Expect=4e-56]} {RNA1509_3623} {RNA1310_2702, RNA1509_3623} {RNA1509_3623, RNA815_1647} |
| 4. | MligTC455_48148 | 1542 | 32.12 | Mlig455_037938 | Neo: - |
DNAI2 | 1.741 | - | - | 0.773 | - | 0.968 | - | Mlig455_037938 {REF} {Length: 2279} {TRANSSPLICED} {Human: ENSG00000171595, DNAI2, dynein axonemal intermediate chain 2, [RH, Score=750, Expect=0.0]} {Mouse: ENSMUSG00000034706, Dnaic2, dynein, axonemal, intermediate chain 2, [RH, Score=736, Expect=0.0]} {Dmel: FBgn0036195, Dnai2, dynein, axonemal, intermediate chain 2, [RH, Score=556, Expect=0.0]} {Smed: dd_Smed_v6_2644_0_1, dd_Smed_v6_2644_0_1, [RH, Score=866, Expect=0.0]} {RNA1509_667} {RNA1310_10436, RNA1509_667} {RNA1509_667, RNA815_3551} |
| 5. | MligTC455_34626 | 2676 | 55.75 | Mlig455_056302 | Neo: - Age: - Regeneration-upregulated BL: 1.177 Regeneration-enriched BL: 1.177 |
EEF1G | 0.965 | - | - | 0.965 | - | - | - | Mlig455_056302 {REF} {Length: 1304} {TRANSSPLICED} {Pfam: Elongation factor 1 gamma, conserved domain [PF00647.21, score=67.4]} {Human: ENSG00000254772, EEF1G, eukaryotic translation elongation factor 1 gamma, [Score=122, Expect=2e-32]} {Mouse: ENSMUSG00000071644, Eef1g, eukaryotic translation elongation factor 1 gamma, [Score=120, Expect=4e-32]} {Dmel: FBgn0029176, eEF1gamma, eukaryotic translation elongation factor 1 gamma, [Score=107, Expect=3e-27]} {Celegans: WBGene00008920, eef-1G, Probable elongation factor 1-gamma, [Score=128, Expect=1e-35]} {Smed: dd_Smed_v6_308_0_1, dd_Smed_v6_308_0_1, [Score=129, Expect=7e-36]} {RNA1509_308} {RNA1310_23079} {RNA815_9188.2} |
| 6. | MligTC455_42177 | 1954 | 40.71 | Mlig455_065113, Mlig455_065124 | Neo: - Age: - |
0.958 | - | - | 0.958 | - | - | - | Mlig455_065113 {REF} {Length: 1592} {TRANSSPLICED} {RNA1509_29642, RNA1509_29813, RNA1509_43463, RNA1509_4456, RNA1509_47637} {RNA1310_23241.1, RNA1509_29813, RNA1509_43463, RNA1509_4456, RNA1509_47637} {RNA1509_29813, RNA1509_43463, RNA1509_4456, RNA1509_47637, RNA815_15481.1} Mlig455_065124 {REF} {Length: 2233} {TRANSSPLICED} {RNA1509_20191, RNA1509_29642, RNA1509_40909} {RNA1310_23241.1, RNA1509_20191, RNA1509_29642, RNA1509_40909} {RNA1509_20191, RNA1509_29642, RNA1509_40909, RNA815_15481.1} |
|
| 7. | MligTC455_25220 | 5921 | 123.36 | Mlig455_036735 | Neo: - Age: - |
NME8 | 0.957 | - | - | 0.957 | - | - | - | Mlig455_036735 {REF} {Length: 2994} {Pfam: Nucleoside diphosphate kinase [PF00334.21, score=360.7]; Thioredoxin [PF00085.22, score=40.7]} {Human: ENSG00000086288, NME8, NME/NM23 family member 8, [RH, Score=331, Expect=1e-102]} {Mouse: ENSMUSG00000041138, Nme8, NME/NM23 family member 8, [RH, Score=310, Expect=5e-95]} {Dmel: FBgn0030359, CG18130, [RH, Score=97.1, Expect=2e-20]} {Celegans: WBGene00009119, ndk-1, Nucleoside diphosphate kinase, [Score=77.0, Expect=3e-16]} {Smed: dd_Smed_v6_8401_0_1, dd_Smed_v6_8401_0_1, [RH, Score=662, Expect=0.0]} {RNA1509_1203} {RNA1310_11078.1} {RNA815_3861} |
| 8. | MligTC455_49288 | 826 | 17.2 | Mlig455_057093 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_057093 {REF} {Length: 1481} {NoTransDecoderORF} {RNA1509_54889} {RNA1310_59350} {RNA815_51618} |
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