TomoSeq data search

Data search

Results for MligTC455_27685

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27685

192

4.00

Mlig455_065374

Neo: -

Age: Down-Up-Up

STOM

Mlig455_065374 {REF} {Length: 2468} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=111.7]; SPFH domain-Band 7 family [PF13421.8, score=19.6]} {Human: ENSG00000148175, STOM, stomatin, [RH, Score=367, Expect=3e-128]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [RH, Score=360, Expect=1e-125]} {Dmel: FBgn0260657, CG42540, [RH, Score=386, Expect=5e-133]} {Celegans: WBGene00006064, sto-2, Stomatin-2, [RH, Score=395, Expect=6e-139]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [Score=384, Expect=2e-135]} {RNA1509_40194} {RNA1310_43578, RNA1509_40194} {RNA1509_40194, RNA815_40183}

Cumulative graph for MligTC455_27685

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.427	2.566	0.22970	0.87325
RegionR2	1.278	2.566	0.21996	0.58838
RegionR3	0.482	2.566	0.61959	1.00000
RegionR4	0.36	2.566	0.68898	0.98091
RegionR5	0.572	2.566	0.53621	0.89902
RegionR6	0.977	2.566	0.31165	0.90125
RegionR7	-0.729	2.566	0.97749	1.00000
RegionR8	2.486	2.566	0.02709	0.32091

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.112	2.566	0.99997	1.00000
RegenerationR2	0.794	2.566	0.13146	0.55725
RegenerationR3	1.397	2.566	0.03248	0.32131
RegenerationR4	1.155	2.566	0.06187	0.39837
RegenerationR5	0.636	2.566	0.26151	0.69289
RegenerationR6	0.681	2.566	0.29123	0.64157
RegenerationBL	0.58	2.566	0.49913	0.86416
RegenerationTP	0.091	2.566	0.91819	1.00000

Genes with expression patterns similar to MligTC455_27685

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27685	192	4	Mlig455_065374	Neo: - Age: Down-Up-Up	STOM	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_065374 {REF} {Length: 2468} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=111.7]; SPFH domain-Band 7 family [PF13421.8, score=19.6]} {Human: ENSG00000148175, STOM, stomatin, [RH, Score=367, Expect=3e-128]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [RH, Score=360, Expect=1e-125]} {Dmel: FBgn0260657, CG42540, [RH, Score=386, Expect=5e-133]} {Celegans: WBGene00006064, sto-2, Stomatin-2, [RH, Score=395, Expect=6e-139]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [Score=384, Expect=2e-135]} {RNA1509_40194} {RNA1310_43578, RNA1509_40194} {RNA1509_40194, RNA815_40183}
2.	MligTC455_35783	47	0.99	Mlig455_020624	Neo: - Age: -		1.868	-	-	0.979	-	0.889	-	Mlig455_020624 {REF} {Length: 2007} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=58.9]} {Smed: dd_Smed_v6_14040_0_1, dd_Smed_v6_14040_0_1, [Score=64.3, Expect=2e-11]} {RNA1310_46235} {RNA815_34663}
3.	MligTC455_27985	52	1.07	Mlig455_060946	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.905	GRM2	0.98	-	-	0.980	-	-	-	Mlig455_060946 {REF} {Length: 7334} {Pfam: Receptor family ligand binding region [PF01094.30, score=193.9]; Periplasmic binding protein [PF13458.8, score=48.7]; Paxillin family [PF03535.15, score=22.4]} {Human: ENSG00000164082, GRM2, glutamate metabotropic receptor 2, [Score=75.5, Expect=4e-13]; ENSG00000198822, GRM3, glutamate metabotropic receptor 3, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000023192, Grm2, glutamate receptor, metabotropic 2, [Score=75.9, Expect=4e-13]; ENSMUSG00000003974, Grm3, glutamate receptor, metabotropic 3, [Score=73.2, Expect=3e-12]} {Dmel: FBgn0019985, mGluR, metabotropic Glutamate Receptor, [Score=70.5, Expect=1e-11]} {Celegans: WBGene00003233, mgl-2, Metabotropic GLutamate receptor family, [Score=61.6, Expect=6e-09]} {Smed: dd_Smed_v6_32826_0_1, dd_Smed_v6_32826_0_1, [Score=70.9, Expect=5e-12]} {RNA1509_24114} {RNA1310_2242} {RNA815_2427}
4.	MligTC455_30351	196	4.07	Mlig455_022280	Neo: - Age: - Region-enriched R2: 3.356/0.00204 Regeneration-upregulated R4: 3.151 Regeneration-enriched R4: 3.151		0.977	-	-	0.977	-	-	-	Mlig455_022280 {REF} {Length: 425} {NoTransDecoderORF} {RNA1509_209} {RNA1310_17208, RNA1509_209} {RNA1509_209, RNA815_4202.1}
5.	MligTC455_14837	63	1.31	Mlig455_006960	Neo: - Age: -	GLRA1	0.971	-	-	0.971	-	-	-	Mlig455_006960 {REF} {Length: 2299} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=147.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=134.7]} {Human: ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=287, Expect=1e-90]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=287, Expect=1e-90]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=287, Expect=7e-91]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=283, Expect=1e-89]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=287, Expect=8e-91]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=287, Expect=9e-91]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=286, Expect=5e-90]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=285, Expect=7e-90]} {Dmel: FBgn0024963, GluClalpha, [Score=255, Expect=1e-78]} {Celegans: WBGene00001512, gab-1, Gamma-aminobutyric acid receptor subunit beta, [Score=255, Expect=1e-77]} {Smed: dd_Smed_v6_11342_0_1, dd_Smed_v6_11342_0_1, [Score=278, Expect=7e-88]} {RNA1310_37694.1} {RNA815_17766}
6.	MligTC455_53380	189	3.93	Mlig455_027381	Neo: - Age: -	ITFG2	0.96	-	-	0.960	-	-	-	Mlig455_027381 {REF} {Length: 3148} {TRANSSPLICED} {Pfam: Integrin-alpha FG-GAP repeat-containing protein 2 [PF15907.7, score=242.2]; Folate receptor family [PF03024.16, score=60.9]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=27.2]; FG-GAP-like repeat [PF13517.8, score=23.9]; FG-GAP repeat [PF01839.25, score=18.8]} {Human: ENSG00000111203, ITFG2, integrin alpha FG-GAP repeat containing 2, [RH, Score=187, Expect=3e-52]} {Mouse: ENSMUSG00000001518, Itfg2, integrin alpha FG-GAP repeat containing 2, [RH, Score=187, Expect=1e-52]} {Smed: dd_Smed_v6_5900_0_1, dd_Smed_v6_5900_0_1, [RH, Score=189, Expect=3e-53]} {RNA1509_40388} {RNA1310_22880, RNA1509_40388} {RNA1509_40388, RNA815_8489}
7.	MligTC455_47697	23	0.48	Mlig455_025363	Neo: - Age: -	ADRA2A	0.958	-	-	0.958	-	-	-	Mlig455_025363 {REF} {Length: 1667} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=263.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=33.1]; Olfactory receptor [PF13853.8, score=25.9]} {Human: ENSG00000150594, ADRA2A, adrenoceptor alpha 2A, [Score=268, Expect=1e-85]; ENSG00000178394, HTR1A, 5-hydroxytryptamine receptor 1A, [Score=260, Expect=5e-83]} {Mouse: ENSMUSG00000033717, Adra2a, adrenergic receptor, alpha 2a, [Score=275, Expect=1e-88]} {Dmel: FBgn0038653, CG18208, [Score=221, Expect=4e-66]} {Celegans: WBGene00006411, octr-1, OCTopamine Receptor (GPCR), [Score=269, Expect=3e-87]} {Smed: dd_Smed_v6_48706_0_1, dd_Smed_v6_48706_0_1, [RH, Score=322, Expect=4e-108]} {RNA1310_113575}
8.	MligTC455_21390	470	9.8	Mlig455_013297, Mlig455_050507	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_013297 {REF} {Length: 1363} {TRANSSPLICED} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=51.6]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=129, Expect=2e-34]} {RNA1509_33360} {RNA1310_24109.1} {RNA815_9543} Mlig455_050507 {REF} {Length: 1891} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=51.6]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=129, Expect=1e-34]} {RNA1509_33360} {RNA1310_24109.3} {RNA815_9543}
9.	MligTC455_29325	95	1.98	Mlig455_055248	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_055248 {REF} {Length: 3007} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=43.5]} {RNA1509_11812} {RNA1310_5637.1} {RNA815_399.1}
10.	MligTC455_32534	166	3.46	Mlig455_034593, Mlig455_040890	Neo: - Age: - Region-enriched R4: 2.124/0.04916		0.954	-	-	-	-	0.954	-	Mlig455_034593 {REF} {Length: 1979} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46555} {RNA1310_8675} {RNA815_3094.1} Mlig455_040890 {REF} {Length: 980} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_8675} {RNA815_3094.1}
11.	MligTC455_40891	307	6.39	Mlig455_049151	Neo: - Age: Down-Up-Up Region-enriched R6: 1.913/0.04850	PDLIM2	0.953	-	-	-	-	0.953	-	Mlig455_049151 {REF} {Length: 1095} {Pfam: PDZ domain [PF00595.26, score=46.8]; PDZ domain [PF17820.3, score=29.1]; PDZ domain [PF13180.8, score=21.8]} {Human: ENSG00000120913, PDLIM2, PDZ and LIM domain 2, [Score=56.6, Expect=4e-09]; ENSG00000122367, LDB3, LIM domain binding 3, [Score=56.2, Expect=5e-09]} {Mouse: ENSMUSG00000039376, Synpo2l, synaptopodin 2-like, [Score=58.9, Expect=9e-10]} {Dmel: FBgn0265991, Zasp52, Z band alternatively spliced PDZ-motif protein 52, [Score=72.8, Expect=3e-15]} {Smed: dd_Smed_v6_2888_0_1, dd_Smed_v6_2888_0_1, [Score=205, Expect=3e-67]} {RNA1509_24383, RNA1509_6937} {RNA1310_31656, RNA1509_24383, RNA1509_6937} {RNA1509_24383, RNA1509_6937, RNA815_15504.1}
12.	MligTC455_42054	347	7.23	Mlig455_016754	Neo: - Age: - Region-enriched R8: 2.150/0.03580		0.953	-	-	0.953	-	-	-	Mlig455_016754 {REF} {Length: 394} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_40364} {RNA1310_120150, RNA1509_40364} {RNA1509_40364, RNA815_56219}
13.	MligTC455_42594	55	1.14	Mlig455_057795	Neo: - Age: -		0.953	-	-	0.953	-	-	-	Mlig455_057795 {REF} {Length: 586} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.2} {RNA815_15457}
14.	MligTC455_34011	72	1.5	Mlig455_033063	Neo: - Age: -	KCNC1	0.952	-	-	0.952	-	-	-	Mlig455_033063 {REF} {Length: 4318} {Pfam: Ion transport protein [PF00520.33, score=148.3]; BTB/POZ domain [PF02214.24, score=101.2]; Ion channel [PF07885.18, score=44.0]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=426, Expect=1e-141]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=424, Expect=2e-140]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=407, Expect=6e-134]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=426, Expect=7e-142]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=2e-135]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=409, Expect=5e-133]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [RH, Score=587, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=690, Expect=0.0]} {RNA1509_54375} {RNA1310_15083.1} {RNA815_13734}
15.	MligTC455_11233	14	0.29	Mlig455_027769	Neo: Int S/G2/M Age: Up-Down-Down		0.95	-	-	0.950	-	-	-	Mlig455_027769 {REF} {Length: 880} {NoTransDecoderORF} {RNA1509_22816} {RNA1310_44682} {RNA815_26712}

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