TomoSeq data search

Data search

Results for MligTC455_27715

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27715

46934

977.78

Mlig455_014149

Neo: -

Age: -

ACTG1

Mlig455_014149 {REF} {Length: 1753} {Pfam: Actin [PF00022.21, score=498.3]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=759, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=756, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=740, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=739, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=736, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=759, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [RH, Score=756, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=740, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=739, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=736, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=725, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=760, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=757, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=750, Expect=0.0]} {RNA1509_2458, RNA1509_27193, RNA1509_36508, RNA1509_42546, RNA1509_452, RNA1509_50406, RNA1509_54461, RNA1509_6651} {RNA1310_26699.1, RNA1509_2458, RNA1509_27193, RNA1509_36508, RNA1509_42546, RNA1509_452, RNA1509_50406, RNA1509_54461, RNA1509_6651} {RNA1509_2458, RNA1509_27193, RNA1509_36508, RNA1509_42546, RNA1509_452, RNA1509_50406, RNA1509_54461, RNA1509_6651, RNA815_4929.3}

Cumulative graph for MligTC455_27715

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.435	9.961	0.28922	0.94131
RegionR2	0.359	9.961	0.29588	0.68463
RegionR3	0.084	9.961	0.78959	1.00000
RegionR4	-0.511	9.961	0.14776	0.39577
RegionR5	-0.78	9.961	0.01715	0.08654
RegionR6	0.292	9.961	0.33775	0.92504
RegionR7	0.479	9.961	0.10208	0.60945
RegionR8	0.513	9.961	0.09052	0.56874

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.389	9.961	0.41225	1.00000
RegenerationR2	0.075	9.961	0.85609	1.00000
RegenerationR3	-0.379	9.961	0.35323	0.77268
RegenerationR4	-0.226	9.961	0.58776	0.90792
RegenerationR5	-0.037	9.961	0.92680	1.00000
RegenerationR6	-0.388	9.961	0.34004	0.68607
RegenerationBL	-0.147	9.961	0.66456	0.99850
RegenerationTP	-0.314	9.961	0.39334	0.82461

Genes with expression patterns similar to MligTC455_27715

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27715	46934	977.78	Mlig455_014149	Neo: - Age: -	ACTG1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_014149 {REF} {Length: 1753} {Pfam: Actin [PF00022.21, score=498.3]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=759, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=756, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=740, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=739, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=736, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=759, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [RH, Score=756, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=740, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=739, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=736, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=725, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=760, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=757, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=750, Expect=0.0]} {RNA1509_2458, RNA1509_27193, RNA1509_36508, RNA1509_42546, RNA1509_452, RNA1509_50406, RNA1509_54461, RNA1509_6651} {RNA1310_26699.1, RNA1509_2458, RNA1509_27193, RNA1509_36508, RNA1509_42546, RNA1509_452, RNA1509_50406, RNA1509_54461, RNA1509_6651} {RNA1509_2458, RNA1509_27193, RNA1509_36508, RNA1509_42546, RNA1509_452, RNA1509_50406, RNA1509_54461, RNA1509_6651, RNA815_4929.3}
2.	MligTC455_30350	36422	758.78	Mlig455_022282	Neo: - Age: Down-Down-Up	TUBB4B	1.67	-	-	0.706	-	0.964	-	Mlig455_022282 {REF} {Length: 3127} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=232.0]; Tubulin C-terminal domain [PF03953.19, score=144.9]; Misato Segment II tubulin-like domain [PF10644.11, score=24.4]} {Human: ENSG00000188229, TUBB4B, tubulin beta 4B class IVb, [RH, Score=922, Expect=0.0]; ENSG00000137285, TUBB2B, tubulin beta 2B class IIb, [RH, Score=910, Expect=0.0]; ENSG00000104833, TUBB4A, tubulin beta 4A class IVa, [RH, Score=908, Expect=0.0]; ENSG00000227739, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000196230, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000232421, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000224156, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000235067, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000183311, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000229684, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000232575, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000137267, TUBB2A, tubulin beta 2A class IIa, [RH, Score=905, Expect=0.0]} {Mouse: ENSMUSG00000036752, Tubb4b, tubulin, beta 4B class IVB, [RH, Score=922, Expect=0.0]; ENSMUSG00000045136, Tubb2b, tubulin, beta 2B class IIB, [RH, Score=910, Expect=0.0]; ENSMUSG00000062591, Tubb4a, tubulin, beta 4A class IVA, [RH, Score=908, Expect=0.0]; ENSMUSG00000058672, Tubb2a, tubulin, beta 2A class IIA, [RH, Score=905, Expect=0.0]; ENSMUSG00000001525, Tubb5, tubulin, beta 5 class I, [RH, Score=905, Expect=0.0]} {Dmel: FBgn0284243, betaTub56D, beta-Tubulin at 56D, [RH, Score=863, Expect=0.0]} {Celegans: WBGene00006538, tbb-4, Tubulin beta-4 chain, [RH, Score=860, Expect=0.0]} {Smed: dd_Smed_v6_83_0_3, dd_Smed_v6_83_0_3, [RH, Score=919, Expect=0.0]} {RNA1509_62} {RNA1310_21825} {RNA815_1610.2}
3.	MligTC455_23419	127	2.64	Mlig455_007618	Neo: - Age: -	TNKS	0.983	-	-	-	-	0.983	-	Mlig455_007618 {REF} {Length: 3164} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=50.6]; Ankyrin repeat [PF00023.32, score=44.9]; Ankyrin repeat [PF13606.8, score=40.4]; Ankyrin repeats (many copies) [PF13637.8, score=37.7]; Ankyrin repeats (many copies) [PF13857.8, score=31.5]} {Human: ENSG00000173273, TNKS, tankyrase, [Score=69.7, Expect=1e-11]; ENSG00000285372, AC270292.3, tankyrase, [Score=69.7, Expect=1e-11]; ENSG00000101745, ANKRD12, ankyrin repeat domain 12, [Score=68.9, Expect=3e-11]; ENSG00000029534, ANK1, ankyrin 1, [Score=67.0, Expect=1e-10]; ENSG00000107854, TNKS2, tankyrase 2, [Score=66.6, Expect=1e-10]} {Mouse: ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=70.5, Expect=5e-12]; ENSMUSG00000034647, Ankrd12, ankyrin repeat domain 12, [Score=69.3, Expect=1e-11]} {Dmel: FBgn0036814, CG14073, [Score=67.0, Expect=6e-11]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=52.8, Expect=6e-07]} {Smed: dd_Smed_v6_3062_0_5, dd_Smed_v6_3062_0_5, [Score=63.9, Expect=3e-11]} {RNA1509_26649} {RNA1310_6822} {RNA815_2586}
4.	MligTC455_33630	343	7.15	Mlig455_011677	Neo: - Age: -		0.967	-	-	-	-	0.967	-	Mlig455_011677 {REF} {Length: 1852} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_55678} {RNA1310_39931.1} {RNA815_24394.1}
5.	MligTC455_38126	181	3.78	Mlig455_001217	Neo: - Age: Down-Up-Down	MOK	0.967	-	-	-	-	0.967	-	Mlig455_001217 {REF} {Length: 3206} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=225.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=101.8]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=23.8]; RIO1 family [PF01163.24, score=20.1]; Kinase-like [PF14531.8, score=19.8]; Kinetochore Sim4 complex subunit FTA2 [PF13095.8, score=18.7]} {Human: ENSG00000080823, MOK, MOK protein kinase, [RH, Score=394, Expect=4e-133]} {Mouse: ENSMUSG00000056458, Mok, MOK protein kinase, [RH, Score=397, Expect=1e-134]} {Dmel: FBgn0259712, CG42366, [Score=259, Expect=5e-78]} {Celegans: WBGene00001121, dyf-5, Serine/threonine-protein kinase dyf-5, [Score=230, Expect=2e-69]} {Smed: dd_Smed_v6_15542_0_1, dd_Smed_v6_15542_0_1, [RH, Score=416, Expect=2e-141]} {RNA1509_23114, RNA1509_48468} {RNA1310_15433.1, RNA1509_23114, RNA1509_48468} {RNA1509_23114, RNA1509_48468, RNA815_13706}
6.	MligTC455_23624	41	0.84	Mlig455_046320, Mlig455_068219	Neo: - Age: -	CFAP97D1	0.961	-	-	-	-	0.961	-	Mlig455_046320 {REF} {Length: 3594} {Pfam: Hemingway/CFA97 [PF13879.8, score=47.1]} {Human: ENSG00000231256, CFAP97D1, CFAP97 domain containing 1, [Score=47.8, Expect=1e-06]} {Mouse: ENSMUSG00000010841, Cfap97d1, CFAP97 domain containing 1, [Score=54.3, Expect=2e-09]} {Smed: dd_Smed_v6_2676_0_1, dd_Smed_v6_2676_0_1, [Score=117, Expect=2e-32]} {RNA1509_50930} {RNA1310_69645} {RNA815_58248} Mlig455_068219 {REF} {Length: 2769} {Pfam: Hemingway/CFA97 [PF13879.8, score=70.9]} {Human: ENSG00000231256, CFAP97D1, CFAP97 domain containing 1, [Score=73.6, Expect=2e-16]} {Mouse: ENSMUSG00000010841, Cfap97d1, CFAP97 domain containing 1, [Score=81.3, Expect=1e-19]} {Smed: dd_Smed_v6_2676_0_1, dd_Smed_v6_2676_0_1, [Score=167, Expect=2e-52]} {RNA1509_28510} {RNA1310_69645} {RNA815_58248}
7.	MligTC455_06996	5	0.1	Mlig455_017062	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_017062 {REF} {Length: 609} {NoTransDecoderORF} {RNA1310_38639} {RNA815_35939}
8.	MligTC455_26015	1794	37.37	Mlig455_009233	Neo: - Age: -	NR1I2	0.955	-	-	-	-	0.955	-	Mlig455_009233 {REF} {Length: 2115} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=60.8]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=82.4, Expect=2e-16]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=79.7, Expect=1e-15]} {Mouse: ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=80.1, Expect=9e-16]; ENSMUSG00000005677, Nr1i3, nuclear receptor subfamily 1, group I, member 3, [Score=79.7, Expect=7e-16]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=82.4, Expect=2e-16]} {Celegans: WBGene00003638, nhr-48, Nuclear hormone receptor family member nhr-48, [Score=88.6, Expect=2e-18]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [RH, Score=90.9, Expect=3e-19]} {RNA1509_45292, RNA1509_9871} {RNA1310_7620, RNA1509_45292} {RNA1509_45292, RNA815_3672.1}
9.	MligTC455_13780	14	0.29	Mlig455_027399	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_027399 {REF} {Length: 992} {RNA1310_52596} {RNA815_18936}
10.	MligTC455_54209	196	4.09	Mlig455_005246	Neo: - Age: logFC(26M/2M)=-0.457	LRRC74A	0.953	-	-	-	-	0.953	-	Mlig455_005246 {REF} {Length: 4154} {Pfam: Leucine Rich repeat [PF13516.8, score=97.2]; Leucine Rich Repeat [PF00560.35, score=29.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.2]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=186, Expect=2e-51]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=182, Expect=4e-50]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=80.1, Expect=2e-15]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [RH, Score=369, Expect=3e-120]} {RNA1509_14523, RNA1509_24088} {RNA1310_10119, RNA1509_14523, RNA1509_24088} {RNA1509_14523, RNA1509_24088, RNA815_985}
11.	MligTC455_06850	684	14.24	Mlig455_062032	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_062032 {REF} {Length: 119} {NoTransDecoderORF} {RNA1509_44779} {RNA1310_24600.2}
12.	MligTC455_45484	127	2.64	Mlig455_054852	Neo: - Age: - Region-enriched R8: 4.705/0.02905	DNTTIP2	0.95	-	-	-	-	0.950	-	Mlig455_054852 {REF} {Length: 2704} {TRANSSPLICED} {Pfam: Fcf2 pre-rRNA processing [PF08698.13, score=82.8]} {Human: ENSG00000067334, DNTTIP2, deoxynucleotidyltransferase terminal interacting protein 2, [RH, Score=103, Expect=1e-24]} {Mouse: ENSMUSG00000039756, Dnttip2, deoxynucleotidyltransferase, terminal, interacting protein 2, [RH, Score=106, Expect=5e-26]} {Dmel: FBgn0037504, CG1142, [RH, Score=70.9, Expect=3e-14]} {Celegans: WBGene00021715, Y49F6B.2, [RH, Score=93.6, Expect=6e-23]} {Smed: dd_Smed_v6_10912_0_1, dd_Smed_v6_10912_0_1, [RH, Score=62.4, Expect=8e-12]} {RNA1509_18463} {RNA1310_33257, RNA1509_18463} {RNA1509_18463, RNA815_17985}

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