M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_27787

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27787 464 9.67 Mlig455_031766

Neo: -

Age: -

 Mlig455_031766 {REF} {Length: 2667} {Pfam: FAM92 protein [PF06730.13, score=72.2]; BAR domain of APPL family [PF16746.7, score=20.3]} {RNA1310_8910} {RNA815_26040}

Cumulative graph for MligTC455_27787

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.382 3.589 0.74663 1.00000
RegionR2 1.055 3.589 0.04441 0.24782
RegionR3 -0.287 3.589 0.55536 1.00000
RegionR4 -0.516 3.589 0.33738 0.65676
RegionR5 -0.06 3.589 0.89320 1.00000
RegionR6 0.017 3.589 0.96925 1.00000
RegionR7 0.588 3.589 0.28708 0.92110
RegionR8 -0.414 3.589 0.59750 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.949 3.589 0.59521 1.00000
RegenerationR2 -0.025 3.589 0.95574 1.00000
RegenerationR3 -0.09 3.589 0.87120 1.00000
RegenerationR4 -0.127 3.589 0.81810 0.99289
RegenerationR5 -0.098 3.589 0.84716 1.00000
RegenerationR6 -0.815 3.589 0.16106 0.48977
RegenerationBL -1.001 3.589 0.15402 0.46947
RegenerationTP 0.214 3.589 0.74371 1.00000


Genes with expression patterns similar to MligTC455_27787

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27787 464 9.67 Mlig455_031766

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_031766 {REF} {Length: 2667} {Pfam: FAM92 protein [PF06730.13, score=72.2]; BAR domain of APPL family [PF16746.7, score=20.3]} {RNA1310_8910} {RNA815_26040}
2. MligTC455_36842 340 7.08 Mlig455_056552

Neo: -

Age: -

Region-enriched R2: 2.409/0.00668

 SYT11 2.638 - - 0.833 0.855 - 0.950 Mlig455_056552 {REF} {Length: 3533} {Pfam: C2 domain [PF00168.32, score=153.6]} {Human: ENSG00000132718, SYT11, synaptotagmin 11, [RH, Score=310, Expect=7e-102]} {Mouse: ENSMUSG00000068923, Syt11, synaptotagmin XI, [RH, Score=309, Expect=8e-102]} {Dmel: FBgn0028400, Syt4, Synaptotagmin 4, [RH, Score=355, Expect=3e-119]} {Celegans: WBGene00004924, snt-4, SyNapTotagmin, [RH, Score=237, Expect=1e-74]} {Smed: dd_Smed_v6_7243_0_1, dd_Smed_v6_7243_0_1, [Score=372, Expect=4e-127]} {RNA1509_16916, RNA1509_47189} {RNA1310_9964.1, RNA1509_16916, RNA1509_47189} {RNA1509_16916, RNA1509_47189, RNA815_17687}
3. MligTC455_40991 373 7.77 Mlig455_012838

Neo: -

Age: Up-Down-Up

 RP1 2.574 - - 0.826 0.785 - 0.963 Mlig455_012838 {REF} {Length: 9664} {TRANSSPLICED} {Pfam: PLAT/LH2 domain [PF01477.25, score=188.4]; Doublecortin [PF03607.19, score=102.1]} {Human: ENSG00000104237, RP1, RP1, axonemal microtubule associated, [Score=419, Expect=3e-120]} {Mouse: ENSMUSG00000025900, Rp1, retinitis pigmentosa 1 (human), [Score=414, Expect=7e-119]} {Dmel: FBgn0261387, CG17528, [Score=68.9, Expect=6e-11]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=75.1, Expect=5e-13]} {Smed: dd_Smed_v6_10315_0_2, dd_Smed_v6_10315_0_2, [Score=480, Expect=2e-142]} {RNA1509_42150} {RNA1310_1407} {RNA815_6255}
4. MligTC455_18417 313 6.52 Mlig455_053948, Mlig455_060585

Neo: -

Age: -

 2.438 - - 0.775 - 0.702 0.961

Mlig455_053948 {REF} {Length: 594} {NoTransDecoderORF} {RNA1509_52816} {RNA1310_3937} {RNA815_30143}

Mlig455_060585 {REF} {Length: 562} {NoTransDecoderORF} {RNA1509_52816} {RNA1310_3937} {RNA815_30143}
5. MligTC455_29568 176 3.66 Mlig455_017614

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.464

 ANK3 2.413 - - 0.757 - 0.704 0.952 Mlig455_017614 {REF} {Length: 6338} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=263.9]; Ankyrin repeats (many copies) [PF13637.8, score=213.4]; Ankyrin repeats (many copies) [PF13857.8, score=202.3]; Ankyrin repeat [PF00023.32, score=187.3]; Ankyrin repeat [PF13606.8, score=162.7]; Mab-21 protein [PF03281.16, score=40.8]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=261, Expect=8e-70]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=261, Expect=4e-70]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=245, Expect=2e-65]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=228, Expect=4e-60]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=229, Expect=1e-60]} {RNA1509_28853, RNA1509_40339, RNA1509_51832} {RNA1310_6164, RNA1509_28853, RNA1509_40339, RNA1509_51832} {RNA1509_28853, RNA1509_40339, RNA1509_51832, RNA815_1489.1}
6. MligTC455_42948 613 12.77 Mlig455_038990

Neo: -

Age: -

 ZDHHC16 1.815 - - - 0.975 - 0.840 Mlig455_038990 {REF} {Length: 2219} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=87.5]; zinc-ribbon family [PF17032.7, score=19.5]; Double zinc ribbon [PF12773.9, score=19.1]} {Human: ENSG00000171307, ZDHHC16, zinc finger DHHC-type containing 16, [Score=74.7, Expect=1e-14]; ENSG00000174165, ZDHHC24, zinc finger DHHC-type containing 24, [Score=74.3, Expect=1e-14]; ENSG00000177108, ZDHHC22, zinc finger DHHC-type containing 22, [Score=73.2, Expect=3e-14]} {Mouse: ENSMUSG00000006463, Zdhhc24, zinc finger, DHHC domain containing 24, [Score=83.2, Expect=6e-18]} {Dmel: FBgn0033815, CG4676, [Score=90.9, Expect=1e-20]} {Celegans: WBGene00008606, dhhc-1, Palmitoyltransferase, [Score=88.6, Expect=5e-20]} {Smed: dd_Smed_v6_7521_0_1, dd_Smed_v6_7521_0_1, [RH, Score=105, Expect=6e-26]} {RNA1509_32597} {RNA1310_14004} {RNA815_7631.1}
7. MligTC455_46117 384 7.99 Mlig455_030128, Mlig455_030194, Mlig455_067972

Neo: -

Age: -

 1.811 - - - 0.843 - 0.968

Mlig455_030128 {REF} {Length: 3020} {Smed: dd_Smed_v6_9728_0_1, dd_Smed_v6_9728_0_1, [Score=70.9, Expect=2e-12]} {RNA1509_52528} {RNA1310_8681} {RNA815_38958}

Mlig455_030194 {REF} {Length: 3159} {Smed: dd_Smed_v6_9728_0_2, dd_Smed_v6_9728_0_2, [Score=82.0, Expect=6e-16]} {RNA1509_52528} {RNA1310_8681} {RNA815_30875}

Mlig455_067972 {REF} {Length: 3149} {Smed: dd_Smed_v6_9728_0_2, dd_Smed_v6_9728_0_2, [Score=80.9, Expect=1e-15]} {RNA1509_52528} {RNA1310_8681} {RNA815_30875}
8. MligTC455_18713 134 2.79 Mlig455_057934, Mlig455_057969

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.845

 1.752 - - - 0.790 - 0.962

Mlig455_057934 {REF} {Length: 1721} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=25.5]} {RNA1310_29499} {RNA815_28946}

Mlig455_057969 {REF} {Length: 1785} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=25.1]} {RNA1310_29499} {RNA815_28946}
9. MligTC455_33511 496 10.33 Mlig455_019112

Neo: -

Age: -

Region-enriched R2: 2.637/0.00674

 INPP1 1.733 - - 0.779 0.954 - - Mlig455_019112 {REF} {Length: 2860} {Pfam: Inositol monophosphatase family [PF00459.27, score=118.2]} {Human: ENSG00000151689, INPP1, inositol polyphosphate-1-phosphatase, [RH, Score=262, Expect=4e-83]} {Mouse: ENSMUSG00000026102, Inpp1, inositol polyphosphate-1-phosphatase, [RH, Score=297, Expect=7e-97]} {Dmel: FBgn0016672, Ipp, Inositol polyphosphate 1-phosphatase, [RH, Score=252, Expect=6e-80]} {Celegans: WBGene00044063, bpnt-1, 3'(2'), 5'-BisPhosphate NucleoTidase 1 homolog, [Score=74.7, Expect=1e-14]} {Smed: dd_Smed_v6_9612_0_1, dd_Smed_v6_9612_0_1, [RH, Score=197, Expect=6e-59]} {RNA1509_8591} {RNA1310_6898.1} {RNA815_7520}
10. MligTC455_50661 79 1.64 Mlig455_059106

Neo: -

Age: -

 1.714 - - - 0.764 - 0.950 Mlig455_059106 {REF} {Length: 711} {NoTransDecoderORF} {RNA1310_39553.1} {RNA815_32589}
11. MligTC455_18376 39 0.81 Mlig455_041605

Neo: -

Age: -

 1.708 - - 0.756 - - 0.952 Mlig455_041605 {REF} {Length: 1674} {Pfam: Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 [PF15807.7, score=20.2]} {RNA1310_89162} {RNA815_48416}
12. MligTC455_23599 300 6.25 Mlig455_025579

Neo: -

Age: Up-Down-Down

Region-enriched R8: 3.645/0.00082

 FBN2 1.675 - - 0.718 - - 0.957 Mlig455_025579 {REF} {Length: 10696} {Pfam: Calcium-binding EGF domain [PF07645.17, score=312.2]; Complement Clr-like EGF-like [PF12662.9, score=241.1]; Coagulation Factor Xa inhibitory site [PF14670.8, score=125.1]; EGF domain [PF12947.9, score=95.9]; EGF-like domain [PF00008.29, score=59.7]; Human growth factor-like EGF [PF12661.9, score=47.9]; Thrombospondin type 1 domain [PF00090.21, score=28.9]; MSP1 EGF domain 1 [PF12946.9, score=21.3]} {Human: ENSG00000138829, FBN2, fibrillin 2, [Score=250, Expect=2e-65]; ENSG00000166147, FBN1, fibrillin 1, [Score=248, Expect=1e-64]; ENSG00000142449, FBN3, fibrillin 3, [Score=243, Expect=3e-63]} {Mouse: ENSMUSG00000024598, Fbn2, fibrillin 2, [Score=253, Expect=1e-66]; ENSMUSG00000027204, Fbn1, fibrillin 1, [Score=251, Expect=5e-66]} {Dmel: FBgn0035798, frac, faulty attraction, [RH, Score=238, Expect=3e-62]} {Celegans: WBGene00001403, fbl-1, Fibulin-1, [Score=192, Expect=3e-50]} {Smed: dd_Smed_v6_2649_0_2, dd_Smed_v6_2649_0_2, [Score=294, Expect=3e-79]} {RNA1509_13106} {RNA1310_487} {RNA815_5734}
13. MligTC455_46893 483 10.06 Mlig455_024475

Neo: -

Age: -

 RAB8B 1.674 - - - 0.721 - 0.953 Mlig455_024475 {REF} {Length: 1459} {Pfam: Ras family [PF00071.24, score=212.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=118.0]; ADP-ribosylation factor family [PF00025.23, score=77.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.0]; Gtr1/RagA G protein conserved region [PF04670.14, score=24.0]; 50S ribosome-binding GTPase [PF01926.25, score=23.9]; RsgA GTPase [PF03193.18, score=21.9]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.9]} {Human: ENSG00000166128, RAB8B, RAB8B, member RAS oncogene family, [Score=257, Expect=7e-87]; ENSG00000167461, RAB8A, RAB8A, member RAS oncogene family, [Score=253, Expect=2e-85]} {Mouse: ENSMUSG00000036943, Rab8b, RAB8B, member RAS oncogene family, [Score=256, Expect=1e-86]; ENSMUSG00000003037, Rab8a, RAB8A, member RAS oncogene family, [Score=254, Expect=6e-86]} {Dmel: FBgn0262518, Rab8, [Score=244, Expect=2e-82]} {Celegans: WBGene00004272, rab-8, RAB family; Rab8, [Score=247, Expect=2e-83]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=250, Expect=6e-85]} {RNA1509_33352, RNA1509_53476} {RNA1310_24855, RNA1509_33352} {RNA1509_33352, RNA815_9980.1}
14. MligTC455_52603 141 2.95 Mlig455_046777

Neo: -

Age: logFC(26M/2M)=0.530

Region-enriched R2: 2.774/0.04440

 CCDC34 1.669 - - - 0.712 - 0.957 Mlig455_046777 {REF} {Length: 2678} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4207) [PF13904.8, score=66.3]} {Human: ENSG00000109881, CCDC34, coiled-coil domain containing 34, [Score=78.2, Expect=3e-15]} {Mouse: ENSMUSG00000027160, Ccdc34, coiled-coil domain containing 34, [Score=65.1, Expect=4e-11]} {Smed: dd_Smed_v6_8640_0_1, dd_Smed_v6_8640_0_1, [RH, Score=93.2, Expect=2e-20]} {RNA1509_18389} {RNA1310_16229} {RNA815_33225}
15. MligTC455_26861 362 7.55 Mlig455_033415, Mlig455_064795

Neo: -

Age: -

 0.98 - - - - - 0.980

Mlig455_033415 {REF} {Length: 1405} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4562) [PF15123.8, score=21.1]} {RNA1509_57859} {RNA1310_48970} {RNA815_25953}

Mlig455_064795 {REF} {Length: 590} {NoTransDecoderORF} {RNA1509_53699} {RNA1310_65460, RNA1509_53699} {RNA1509_53699, RNA815_61504}
16. MligTC455_34721 210 4.37 Mlig455_019778

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.334

 NIM1K 0.976 - - - - - 0.976 Mlig455_019778 {REF} {Length: 3764} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=229.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=133.5]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=27.5]; Kinase-like [PF14531.8, score=25.4]} {Human: ENSG00000177453, NIM1K, NIM1 serine/threonine protein kinase, [RH, Score=453, Expect=3e-156]} {Mouse: ENSMUSG00000095930, Nim1k, NIM1 serine/threonine protein kinase, [RH, Score=452, Expect=8e-156]} {Dmel: FBgn0031299, CG4629, [RH, Score=295, Expect=5e-93]} {Celegans: WBGene00009867, F49C5.4, [RH, Score=355, Expect=2e-117]} {Smed: dd_Smed_v6_15794_0_1, dd_Smed_v6_15794_0_1, [RH, Score=410, Expect=4e-139]} {RNA1509_26319, RNA1509_53016} {RNA1310_16082.1, RNA1509_26319, RNA1509_53016} {RNA1509_26319, RNA1509_53016, RNA815_4664.1}
17. MligTC455_21542 450 9.38 Mlig455_048019

Neo: -

Age: -

 TBC1D32 0.973 - - - - - 0.973 Mlig455_048019 {REF} {Length: 4789} {TRANSSPLICED} {Pfam: Broad-minded protein [PF14961.8, score=920.1]} {Human: ENSG00000146350, TBC1D32, TBC1 domain family member 32, [RH, Score=607, Expect=0.0]} {Mouse: ENSMUSG00000038122, Tbc1d32, TBC1 domain family, member 32, [RH, Score=639, Expect=0.0]} {Smed: dd_Smed_v6_16049_0_1, dd_Smed_v6_16049_0_1, [RH, Score=506, Expect=5e-157]} {RNA1509_53921, RNA1509_6706} {RNA1310_1384, RNA1509_53921} {RNA1509_53921, RNA815_17065}
18. MligTC455_25971 151 3.14 Mlig455_009163

Neo: -

Age: -

Regeneration-downregulated BL: -6.673

Regeneration-depleted BL: -6.673

 0.971 - - - - - 0.971 Mlig455_009163 {REF} {Length: 2858} {RNA1509_41399} {RNA1310_25715, RNA1509_41399} {RNA1509_41399, RNA815_12763}
19. MligTC455_39315 215 4.48 Mlig455_002260

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.448

Region-enriched R2: 2.806/0.02025

 CFAP99 0.968 - - - - - 0.968 Mlig455_002260 {REF} {Length: 3233} {Human: ENSG00000206113, CFAP99, cilia and flagella associated protein 99, [Score=187, Expect=8e-52]} {Mouse: ENSMUSG00000109572, Cfap99, cilia and flagella associated protein 99, [Score=201, Expect=2e-57]} {Smed: dd_Smed_v6_8538_0_1, dd_Smed_v6_8538_0_1, [Score=203, Expect=1e-58]} {RNA1509_10540} {RNA1310_6581} {RNA815_2531}
20. MligTC455_32300 256 5.34 Mlig455_036534

Neo: -

Age: -

Region-enriched R2: 2.018/0.04615

 0.963 - - - - - 0.963 Mlig455_036534 {REF} {Length: 3738} {TRANSSPLICED} {Smed: dd_Smed_v6_5953_0_1, dd_Smed_v6_5953_0_1, [Score=88.2, Expect=4e-20]} {RNA1509_24553, RNA1509_27954} {RNA1310_25241.1, RNA1509_24553, RNA1509_27954} {RNA1509_24553, RNA1509_27954, RNA815_10356}
21. MligTC455_17771 78 1.62 Mlig455_001663

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_001663 {REF} {Length: 1828} {NoTransDecoderORF} {RNA1310_81916}
22. MligTC455_17739 59 1.22 Mlig455_005043

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=0.386

 MEIS2 0.96 - - - - - 0.960 Mlig455_005043 {REF} {Length: 5492} {TRANSSPLICED} {Pfam: N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=68.2]} {Human: ENSG00000134138, MEIS2, Meis homeobox 2, [Score=93.6, Expect=4e-20]; ENSG00000165495, PKNOX2, PBX/knotted 1 homeobox 2, [Score=93.6, Expect=4e-20]; ENSG00000143995, MEIS1, Meis homeobox 1, [Score=93.6, Expect=4e-20]; ENSG00000105419, MEIS3, Meis homeobox 3, [Score=92.0, Expect=1e-19]} {Mouse: ENSMUSG00000035934, Pknox2, Pbx/knotted 1 homeobox 2, [Score=93.6, Expect=3e-20]; ENSMUSG00000027210, Meis2, Meis homeobox 2, [Score=93.6, Expect=3e-20]; ENSMUSG00000020160, Meis1, Meis homeobox 1, [Score=93.6, Expect=3e-20]; ENSMUSG00000041420, Meis3, Meis homeobox 3, [Score=89.4, Expect=5e-19]} {Dmel: FBgn0001235, hth, homothorax, [Score=89.7, Expect=5e-20]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=92.0, Expect=8e-20]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [Score=141, Expect=2e-36]} {RNA1509_9638} {RNA1310_1426.1, RNA1509_9638} {RNA1509_9638, RNA815_7214}
23. MligTC455_11557 202 4.2 Mlig455_002032, Mlig455_002122

Neo: -

Age: Down-Up-Up

Region-enriched R2: 4.361/0.00656

 LIMS2 0.959 - - - - - 0.959

Mlig455_002032 {REF} {Length: 1855} {RNA1509_54456} {RNA1310_17112} {RNA815_6319.1}

Mlig455_002122 {REF} {Length: 3000} {Pfam: LIM domain [PF00412.24, score=36.8]} {Human: ENSG00000072163, LIMS2, LIM zinc finger domain containing 2, [Score=111, Expect=5e-26]; ENSG00000169756, LIMS1, LIM zinc finger domain containing 1, [Score=107, Expect=1e-24]} {Mouse: ENSMUSG00000019920, Lims1, LIM and senescent cell antigen-like domains 1, [Score=107, Expect=1e-24]; ENSMUSG00000024395, Lims2, LIM and senescent cell antigen like domains 2, [Score=103, Expect=2e-23]} {Dmel: FBgn0020249, stck, steamer duck, [Score=131, Expect=3e-33]} {Celegans: WBGene00006826, unc-97, LIM domain-containing protein unc-97, [Score=129, Expect=1e-32]} {Smed: dd_Smed_v6_2476_0_1, dd_Smed_v6_2476_0_1, [Score=139, Expect=6e-36]} {RNA1509_57197} {RNA1310_17112} {RNA815_6319.1}
24. MligTC455_29874 65 1.36 Mlig455_037947, Mlig455_068699

Neo: -

Age: logFC(26M/2M)=-0.467

 ANKRD50 0.957 - - - - - 0.957

Mlig455_037947 {REF} {Length: 4099} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=309.9]; Ankyrin repeat [PF00023.32, score=295.0]; Ankyrin repeat [PF13606.8, score=230.6]; Ankyrin repeats (many copies) [PF13637.8, score=228.6]; Ankyrin repeats (many copies) [PF13857.8, score=200.7]; Glutamine amidotransferase domain [PF13537.8, score=68.9]; PEGA domain [PF08308.13, score=35.0]; Mab-21 protein [PF03281.16, score=29.5]; Nucleoplasmin/nucleophosmin domain [PF03066.17, score=26.4]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=276, Expect=2e-75]; ENSG00000029534, ANK1, ankyrin 1, [Score=270, Expect=5e-73]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=274, Expect=8e-75]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=256, Expect=7e-69]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=258, Expect=1e-69]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=256, Expect=2e-71]} {RNA1509_26004, RNA1509_28959} {RNA1310_3906.1, RNA1509_28959} {RNA1509_28959, RNA815_1664.1}

Mlig455_068699 {REF} {Length: 2234} {Pfam: Mab-21 protein [PF03281.16, score=31.1]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}
25. MligTC455_31997 202 4.22 Mlig455_050871

Neo: -

Age: logFC(26M/2M)=-0.486

 0.954 - - - - - 0.954 Mlig455_050871 {REF} {Length: 4451} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=56.4]} {Smed: dd_Smed_v6_6819_0_2, dd_Smed_v6_6819_0_2, [Score=141, Expect=5e-38]} {RNA1509_22651} {RNA1310_622.1} {RNA815_2514.1}
26. MligTC455_47290 272 5.67 Mlig455_068255

Neo: -

Age: logFC(26M/2M)=0.320

 LENG9 0.954 - - - - - 0.954 Mlig455_068255 {REF} {Length: 3500} {TRANSSPLICED} {Pfam: AKAP7 2'5' RNA ligase-like domain [PF10469.11, score=109.5]; MJ1316 RNA cyclic group end recognition domain [PF04457.14, score=83.3]; 2'-5' RNA ligase superfamily [PF13563.8, score=23.8]; LigT like Phosphoesterase [PF02834.18, score=22.3]} {Human: ENSG00000273574, LENG9, leukocyte receptor cluster member 9, [RH, Score=100, Expect=7e-22]; ENSG00000274495, LENG9, leukocyte receptor cluster member 9, [RH, Score=100, Expect=7e-22]} {Mouse: ENSMUSG00000043432, Leng9, leukocyte receptor cluster (LRC) member 9, [RH, Score=116, Expect=3e-27]} {RNA1509_50306} {RNA1310_7334.1} {RNA815_22553}
27. MligTC455_21740 254 5.3 Mlig455_008034, Mlig455_008071

Neo: -

Age: Up-Down-Up

 CCDC150 0.953 - - - - - 0.953

Mlig455_008034 {REF} {Length: 3802} {TRANSSPLICED} {Human: ENSG00000144395, CCDC150, coiled-coil domain containing 150, [Score=80.1, Expect=1e-14]} {Mouse: ENSMUSG00000025983, Ccdc150, coiled-coil domain containing 150, [Score=76.6, Expect=1e-13]} {RNA1509_19254} {RNA1310_9574} {RNA815_22339}

Mlig455_008071 {REF} {Length: 3867} {TRANSSPLICED} {Human: ENSG00000144395, CCDC150, coiled-coil domain containing 150, [Score=79.7, Expect=2e-14]} {Mouse: ENSMUSG00000025983, Ccdc150, coiled-coil domain containing 150, [Score=76.6, Expect=1e-13]} {RNA1509_19254} {RNA1310_9574, RNA1509_19254} {RNA1509_19254, RNA815_22339}
28. MligTC455_36044 90 1.87 Mlig455_046454

Neo: -

Age: logFC(26M/2M)=-0.693

 LOXHD1 0.953 - - - - - 0.953 Mlig455_046454 {REF} {Length: 4916} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=93.5]; PLAT/LH2 domain [PF01477.25, score=23.8]} {Human: ENSG00000167210, LOXHD1, lipoxygenase homology domains 1, [Score=57.4, Expect=2e-07]} {Mouse: ENSMUSG00000032818, Loxhd1, lipoxygenase homology domains 1, [Score=57.4, Expect=1e-07]} {Smed: dd_Smed_v6_39713_0_1, dd_Smed_v6_39713_0_1, [Score=63.9, Expect=4e-10]} {RNA1509_25188} {RNA1310_11606} {RNA815_15282}
29. MligTC455_40794 268 5.57 Mlig455_017617

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_017617 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: RING-variant domain [PF12906.9, score=43.8]} {Dmel: FBgn0035983, CG4080, [Score=48.9, Expect=6e-06]} {RNA1509_39355} {RNA1310_22099.1} {RNA815_10655}
30. MligTC455_50966 248 5.17 Mlig455_034883, Mlig455_034896

Neo: -

Age: Down-Up-Up

 NOL12 0.95 - - - - - 0.950

Mlig455_034883 {REF} {Length: 672} {TRANSSPLICED} {Pfam: Nucleolar protein 12 (25kDa) [PF09805.11, score=44.6]} {Human: ENSG00000273899, NOL12, nucleolar protein 12, [RH, Score=59.7, Expect=3e-11]; ENSG00000100101, Z83844.1, novel transcript, [RH, Score=59.7, Expect=3e-11]} {Mouse: ENSMUSG00000033099, Nol12, nucleolar protein 12, [RH, Score=57.8, Expect=1e-10]} {RNA1509_42821} {RNA1310_81032} {RNA815_24269}

Mlig455_034896 {REF} {Length: 709} {TRANSSPLICED} {Pfam: Nucleolar protein 12 (25kDa) [PF09805.11, score=50.1]} {Human: ENSG00000273899, NOL12, nucleolar protein 12, [RH, Score=62.0, Expect=8e-12]; ENSG00000100101, Z83844.1, novel transcript, [RH, Score=61.6, Expect=1e-11]} {Mouse: ENSMUSG00000033099, Nol12, nucleolar protein 12, [RH, Score=59.7, Expect=4e-11]} {RNA1509_42821} {RNA1310_51251, RNA1509_42821} {RNA1509_42821, RNA815_24269}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA