TomoSeq data search

Data search

Results for MligTC455_27790

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27790	25	0.53	Mlig455_013428	Neo: - Age: -		Mlig455_013428 {REF} {Length: 1632} {Pfam: zinc-binding in reverse transcriptase [PF13966.8, score=24.4]} {Smed: dd_Smed_v6_13734_0_24, dd_Smed_v6_13734_0_24, [RH, Score=106, Expect=8e-27]}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_27790

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.526	0.955	0.48854	1.00000
RegionR2	1.725	0.955	0.58943	0.94325
RegionR3	2.068	0.955	0.02243	0.25396
RegionR4	-0.816	0.955	0.50658	0.83274
RegionR5	0.114	0.955	0.36813	0.72075
RegionR6	0.551	0.955	0.52412	1.00000
RegionR7	0.276	0.955	0.99917	1.00000
RegionR8	0.607	0.955	0.99851	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.148	0.955	0.99996	1.00000
RegenerationR2	-1.925	0.955	0.25761	0.70402
RegenerationR3	-2.863	0.955	0.14497	0.57222
RegenerationR4	-1.354	0.955	0.35269	0.78236
RegenerationR5	-2.173	0.955	0.16205	0.58634
RegenerationR6	-1.362	0.955	0.39830	0.73612
RegenerationBL	-1.443	0.955	0.47155	0.83774
RegenerationTP	-2.042	0.955	0.62507	0.97439

Genes with expression patterns similar to MligTC455_27790

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27790	25	0.53	Mlig455_013428	Neo: - Age: -		2	1.000	1.000	-	-	-	-	Mlig455_013428 {REF} {Length: 1632} {Pfam: zinc-binding in reverse transcriptase [PF13966.8, score=24.4]} {Smed: dd_Smed_v6_13734_0_24, dd_Smed_v6_13734_0_24, [RH, Score=106, Expect=8e-27]}
2.	MligTC455_33710	256	5.33	Mlig455_013216, Mlig455_013240, Mlig455_013311, Mlig455_013429, Mlig455_034974, Mlig455_039502, Mlig455_039503, Mlig455_039505, Mlig455_048431, Mlig455_048574, Mlig455_049037	Neo: - Age: Down-Down-Up		1.906	0.946	0.960	-	-	-	-	Mlig455_013216 {REF} {Length: 220} {NoTransDecoderORF} Mlig455_013240 {REF} {Length: 1189} {RNA1509_45173} {RNA1310_6693.2} {RNA815_38657} Mlig455_013311 {REF} {Length: 1182} {RNA1509_45173} {RNA1310_6693.2} {RNA815_38657} Mlig455_013429 {REF} {Length: 252} {NoTransDecoderORF} Mlig455_034974 {REF} {Length: 193} {NoTransDecoderORF} Mlig455_039502 {REF} {Length: 1314} {NoTransDecoderORF} {RNA1509_18414} {RNA1310_106502} {RNA815_43289} Mlig455_039503 {REF} {Length: 3162} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=116.3]; zinc-binding in reverse transcriptase [PF13966.8, score=19.8]} {Celegans: WBGene00012061, T26G10.4, [RH, Score=67.0, Expect=2e-11]} {Smed: dd_Smed_v6_19123_0_1, dd_Smed_v6_19123_0_1, [RH, Score=365, Expect=1e-111]} {RNA1310_121196} Mlig455_039505 {REF} {Length: 291} {NoTransDecoderORF} Mlig455_048431 {REF} {Length: 192} {NoTransDecoderORF} Mlig455_048574 {REF} {Length: 197} {NoTransDecoderORF} Mlig455_049037 {REF} {Length: 196} {NoTransDecoderORF}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_27790

0.53

Mlig455_013428

Neo: -

Age: -

1.000

Mlig455_013428 {REF} {Length: 1632} {Pfam: zinc-binding in reverse transcriptase [PF13966.8, score=24.4]} {Smed: dd_Smed_v6_13734_0_24, dd_Smed_v6_13734_0_24, [RH, Score=106, Expect=8e-27]}

MligTC455_33710

256

5.33

Mlig455_013216, Mlig455_013240, Mlig455_013311, Mlig455_013429, Mlig455_034974, Mlig455_039502, Mlig455_039503, Mlig455_039505, Mlig455_048431, Mlig455_048574, Mlig455_049037

Neo: -

Age: Down-Down-Up

1.906

0.946

0.960

Mlig455_013216 {REF} {Length: 220} {NoTransDecoderORF}

Mlig455_013240 {REF} {Length: 1189} {RNA1509_45173} {RNA1310_6693.2} {RNA815_38657}

Mlig455_013311 {REF} {Length: 1182} {RNA1509_45173} {RNA1310_6693.2} {RNA815_38657}

Mlig455_013429 {REF} {Length: 252} {NoTransDecoderORF}

Mlig455_034974 {REF} {Length: 193} {NoTransDecoderORF}

Mlig455_039502 {REF} {Length: 1314} {NoTransDecoderORF} {RNA1509_18414} {RNA1310_106502} {RNA815_43289}

Mlig455_039503 {REF} {Length: 3162} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=116.3]; zinc-binding in reverse transcriptase [PF13966.8, score=19.8]} {Celegans: WBGene00012061, T26G10.4, [RH, Score=67.0, Expect=2e-11]} {Smed: dd_Smed_v6_19123_0_1, dd_Smed_v6_19123_0_1, [RH, Score=365, Expect=1e-111]} {RNA1310_121196}

Mlig455_039505 {REF} {Length: 291} {NoTransDecoderORF}

Mlig455_048431 {REF} {Length: 192} {NoTransDecoderORF}

Mlig455_048574 {REF} {Length: 197} {NoTransDecoderORF}

Mlig455_049037 {REF} {Length: 196} {NoTransDecoderORF}