Data search


search
Exact
Search

Results for MligTC455_27823

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27823 29765 620.11 Mlig455_062765

Neo: Int S/G2/M

Age: Down-Down-Up, logFC(26M/2M)=0.985

HSPA8 Mlig455_062765 {REF} {Length: 2377} {Pfam: Hsp70 protein [PF00012.22, score=871.2]; MreB/Mbl protein [PF06723.15, score=63.2]; Cell division protein FtsA [PF14450.8, score=22.3]} {Human: ENSG00000109971, HSPA8, heat shock protein family A (Hsp70) member 8, [RH, Score=1141, Expect=0.0]} {Mouse: ENSMUSG00000015656, Hspa8, heat shock protein 8, [RH, Score=1141, Expect=0.0]; ENSMUSG00000007033, Hspa1l, heat shock protein 1-like, [RH, Score=1085, Expect=0.0]} {Dmel: FBgn0266599, Hsc70-4, Heat shock protein cognate 4, [RH, Score=1094, Expect=0.0]} {Celegans: WBGene00002005, hsp-1, Heat shock 70 kDa protein A, [RH, Score=1078, Expect=0.0]} {Smed: dd_Smed_v6_15_0_1, dd_Smed_v6_15_0_1, [RH, Score=1159, Expect=0.0]} {RNA1509_1265, RNA1509_1571, RNA1509_172, RNA1509_29992, RNA1509_692} {RNA1310_4147.2, RNA1509_1265, RNA1509_1571, RNA1509_29992, RNA1509_692} {RNA1509_1265, RNA1509_1571, RNA1509_29992, RNA1509_692, RNA815_1206.2}

Cumulative graph for MligTC455_27823

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.075 9.289 0.77965 1.00000
RegionR2 -0.608 9.289 0.00553 0.06870
RegionR3 0.14 9.289 0.44920 0.96109
RegionR4 0.436 9.289 0.03400 0.14840
RegionR5 0.111 9.289 0.54224 0.90471
RegionR6 0.28 9.289 0.12784 0.64824
RegionR7 0.043 9.289 0.82203 1.00000
RegionR8 -0.327 9.289 0.12637 0.65343

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.348 9.289 0.28789 0.98638
RegenerationR2 0.578 9.289 0.01597 0.20771
RegenerationR3 0.057 9.289 0.81417 0.98603
RegenerationR4 -0.367 9.289 0.14070 0.56297
RegenerationR5 0.028 9.289 0.90857 1.00000
RegenerationR6 0.112 9.289 0.63876 0.89241
RegenerationBL 0.072 9.289 0.72931 1.00000
RegenerationTP 0.122 9.289 0.58992 0.95485


Genes with expression patterns similar to MligTC455_27823

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27823 29765 620.11 Mlig455_062765

Neo: Int S/G2/M

Age: Down-Down-Up, logFC(26M/2M)=0.985

HSPA8 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_062765 {REF} {Length: 2377} {Pfam: Hsp70 protein [PF00012.22, score=871.2]; MreB/Mbl protein [PF06723.15, score=63.2]; Cell division protein FtsA [PF14450.8, score=22.3]} {Human: ENSG00000109971, HSPA8, heat shock protein family A (Hsp70) member 8, [RH, Score=1141, Expect=0.0]} {Mouse: ENSMUSG00000015656, Hspa8, heat shock protein 8, [RH, Score=1141, Expect=0.0]; ENSMUSG00000007033, Hspa1l, heat shock protein 1-like, [RH, Score=1085, Expect=0.0]} {Dmel: FBgn0266599, Hsc70-4, Heat shock protein cognate 4, [RH, Score=1094, Expect=0.0]} {Celegans: WBGene00002005, hsp-1, Heat shock 70 kDa protein A, [RH, Score=1078, Expect=0.0]} {Smed: dd_Smed_v6_15_0_1, dd_Smed_v6_15_0_1, [RH, Score=1159, Expect=0.0]} {RNA1509_1265, RNA1509_1571, RNA1509_172, RNA1509_29992, RNA1509_692} {RNA1310_4147.2, RNA1509_1265, RNA1509_1571, RNA1509_29992, RNA1509_692} {RNA1509_1265, RNA1509_1571, RNA1509_29992, RNA1509_692, RNA815_1206.2}
2. MligTC455_27822 36320 756.67 Mlig455_014175

Neo: Int S/G2/M

Age: -

HSPA8 2.574 0.706 - - 0.895 0.973 - Mlig455_014175 {REF} {Length: 2536} {Pfam: Hsp70 protein [PF00012.22, score=871.1]; MreB/Mbl protein [PF06723.15, score=63.1]; Cell division protein FtsA [PF14450.8, score=22.6]} {Human: ENSG00000109971, HSPA8, heat shock protein family A (Hsp70) member 8, [RH, Score=1140, Expect=0.0]} {Mouse: ENSMUSG00000015656, Hspa8, heat shock protein 8, [RH, Score=1141, Expect=0.0]; ENSMUSG00000007033, Hspa1l, heat shock protein 1-like, [RH, Score=1084, Expect=0.0]} {Dmel: FBgn0266599, Hsc70-4, Heat shock protein cognate 4, [RH, Score=1093, Expect=0.0]} {Celegans: WBGene00002005, hsp-1, Heat shock 70 kDa protein A, [RH, Score=1078, Expect=0.0]} {Smed: dd_Smed_v6_15_0_1, dd_Smed_v6_15_0_1, [RH, Score=1158, Expect=0.0]} {RNA1509_17, RNA1509_391, RNA1509_559} {RNA1310_4147.2, RNA1509_17, RNA1509_391, RNA1509_559} {RNA1509_17, RNA1509_391, RNA1509_559, RNA815_1206.2}
3. MligTC455_27821 42436 884.07 Mlig455_003121

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.890

HSPA8 1.838 - - - 0.952 0.886 - Mlig455_003121 {REF} {Length: 2720} {Pfam: Hsp70 protein [PF00012.22, score=871.1]; MreB/Mbl protein [PF06723.15, score=63.2]; Cell division protein FtsA [PF14450.8, score=22.7]} {Human: ENSG00000109971, HSPA8, heat shock protein family A (Hsp70) member 8, [RH, Score=1141, Expect=0.0]} {Mouse: ENSMUSG00000015656, Hspa8, heat shock protein 8, [RH, Score=1141, Expect=0.0]; ENSMUSG00000007033, Hspa1l, heat shock protein 1-like, [RH, Score=1085, Expect=0.0]} {Dmel: FBgn0266599, Hsc70-4, Heat shock protein cognate 4, [RH, Score=1093, Expect=0.0]} {Celegans: WBGene00002005, hsp-1, Heat shock 70 kDa protein A, [RH, Score=1079, Expect=0.0]} {Smed: dd_Smed_v6_15_0_1, dd_Smed_v6_15_0_1, [RH, Score=1160, Expect=0.0]} {RNA1509_10685, RNA1509_172, RNA1509_29431, RNA1509_3974} {RNA1310_4147.2, RNA1509_10685, RNA1509_172, RNA1509_29431, RNA1509_3974} {RNA1509_10685, RNA1509_172, RNA1509_29431, RNA1509_3974, RNA815_1206.2}
4. MligTC455_33790 936 19.5 Mlig455_029354

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.333

URB1 0.954 - - - 0.954 - - Mlig455_029354 {REF} {Length: 3970} {TRANSSPLICED} {Pfam: Nucleolar pre-ribosomal-associated protein 1 [PF16201.7, score=127.7]; Ribosome 60S biogenesis N-terminal [PF11707.10, score=110.2]; C2H2-type zinc finger [PF13894.8, score=33.2]; Zinc-finger double domain [PF13465.8, score=33.1]; Zinc finger, C2H2 type [PF00096.28, score=27.3]} {Human: ENSG00000142207, URB1, URB1 ribosome biogenesis 1 homolog (S. cerevisiae), [RH, Score=135, Expect=4e-31]} {Mouse: ENSMUSG00000039929, Urb1, URB1 ribosome biogenesis 1 homolog (S. cerevisiae), [RH, Score=136, Expect=1e-31]} {Dmel: FBgn0031610, CG15436, [Score=83.6, Expect=1e-16]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=72.4, Expect=8e-14]} {Smed: dd_Smed_v6_19859_0_1, dd_Smed_v6_19859_0_1, [Score=80.5, Expect=1e-15]} {RNA1509_19963, RNA1509_38853, RNA1509_44385, RNA1509_50245} {RNA1310_3587, RNA1509_19963, RNA1509_38853, RNA1509_44385, RNA1509_50245} {RNA1509_19963, RNA1509_38853, RNA1509_44385, RNA1509_50245, RNA815_1662}
5. MligTC455_42480 1032 21.49 Mlig455_067220

Neo: -

Age: -

0.95 - - - 0.950 - - Mlig455_067220 {REF} {Length: 2253} {RNA1509_21948, RNA1509_36834} {RNA1310_14298, RNA1509_21948} {RNA1509_21948, RNA815_4639}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA