TomoSeq data search

Data search

Results for MligTC455_27898

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27898	854	17.78	Mlig455_040343	Neo: - Age: -		Mlig455_040343 {REF} {Length: 5708} {TRANSSPLICED} {RNA1509_37217, RNA1509_39906, RNA1509_55086} {RNA1310_35295, RNA1509_37217, RNA1509_39906, RNA1509_55086} {RNA1509_37217, RNA1509_39906, RNA1509_55086, RNA815_24386}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_27898

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.506	4.422	0.55899	1.00000
RegionR2	0.733	4.422	0.10203	0.39338
RegionR3	-0.018	4.422	0.96070	1.00000
RegionR4	0.081	4.422	0.85430	1.00000
RegionR5	-0.261	4.422	0.45358	0.81555
RegionR6	0.07	4.422	0.85127	1.00000
RegionR7	-1.093	4.422	0.03392	0.35108
RegionR8	-0.016	4.422	0.97431	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.438	4.422	0.73309	1.00000
RegenerationR2	-0.108	4.422	0.78148	0.98373
RegenerationR3	0.127	4.422	0.77863	0.97470
RegenerationR4	0.006	4.422	0.99164	1.00000
RegenerationR5	0.293	4.422	0.49455	0.85567
RegenerationR6	-0.128	4.422	0.78152	0.96815
RegenerationBL	0.364	4.422	0.48739	0.85226
RegenerationTP	0.257	4.422	0.65107	0.98938

Genes with expression patterns similar to MligTC455_27898

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27898	854	17.78	Mlig455_040343	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_040343 {REF} {Length: 5708} {TRANSSPLICED} {RNA1509_37217, RNA1509_39906, RNA1509_55086} {RNA1310_35295, RNA1509_37217, RNA1509_39906, RNA1509_55086} {RNA1509_37217, RNA1509_39906, RNA1509_55086, RNA815_24386}
2.	MligTC455_35829	809	16.85	Mlig455_039066	Neo: - Age: logFC(26M/2M)=0.186	MAPKAPK2	0.976	-	-	-	-	0.976	-	Mlig455_039066 {REF} {Length: 4121} {Pfam: Protein kinase domain [PF00069.27, score=229.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=104.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=24.7]; Kinase-like [PF14531.8, score=20.4]} {Human: ENSG00000162889, MAPKAPK2, mitogen-activated protein kinase-activated protein kinase 2, [RH, Score=489, Expect=2e-173]; ENSG00000114738, MAPKAPK3, mitogen-activated protein kinase-activated protein kinase 3, [RH, Score=483, Expect=5e-171]} {Mouse: ENSMUSG00000016528, Mapkapk2, MAP kinase-activated protein kinase 2, [RH, Score=486, Expect=1e-172]; ENSMUSG00000032577, Mapkapk3, mitogen-activated protein kinase-activated protein kinase 3, [RH, Score=483, Expect=3e-171]} {Dmel: FBgn0013987, MAPk-Ak2, MAP kinase activated protein-kinase-2, [RH, Score=462, Expect=2e-163]} {Celegans: WBGene00007007, mak-2, MAP kinase-activated protein kinase mak-2, [RH, Score=427, Expect=8e-150]} {Smed: dd_Smed_v6_12176_0_2, dd_Smed_v6_12176_0_2, [RH, Score=473, Expect=3e-168]} {RNA1509_9679} {RNA1310_29554.1} {RNA815_6588}
3.	MligTC455_52702	1145	23.86	Mlig455_000394	Neo: - Age: -	DSCAML1	0.959	-	-	-	-	0.959	-	Mlig455_000394 {REF} {Length: 8268} {Pfam: Fibronectin type III domain [PF00041.23, score=177.6]; Immunoglobulin domain [PF13927.8, score=132.6]; Immunoglobulin I-set domain [PF07679.18, score=93.4]; Immunoglobulin domain [PF13895.8, score=76.5]; Immunoglobulin domain [PF00047.27, score=62.7]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=46.6]; Immunoglobulin V-set domain [PF07686.19, score=46.0]} {Human: ENSG00000177103, DSCAML1, DS cell adhesion molecule like 1, [RH, Score=238, Expect=3e-62]} {Mouse: ENSMUSG00000032087, Dscaml1, DS cell adhesion molecule like 1, [RH, Score=239, Expect=2e-62]} {Dmel: FBgn0263219, Dscam4, Down syndrome cell adhesion molecule 4, [Score=218, Expect=3e-56]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=83.2, Expect=2e-15]} {Smed: dd_Smed_v6_3024_0_1, dd_Smed_v6_3024_0_1, [RH, Score=330, Expect=1e-90]} {RNA1509_2497, RNA1509_37795} {RNA1310_1245.1, RNA1509_2497, RNA1509_37795} {RNA1509_2497, RNA1509_37795, RNA815_4978}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_27898

854

17.78

Mlig455_040343

Neo: -

Age: -

1.000

MligTC455_35829

809

16.85

Mlig455_039066

Neo: -

Age: logFC(26M/2M)=0.186

MAPKAPK2

0.976

Mlig455_039066 {REF} {Length: 4121} {Pfam: Protein kinase domain [PF00069.27, score=229.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=104.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=24.7]; Kinase-like [PF14531.8, score=20.4]} {Human: ENSG00000162889, MAPKAPK2, mitogen-activated protein kinase-activated protein kinase 2, [RH, Score=489, Expect=2e-173]; ENSG00000114738, MAPKAPK3, mitogen-activated protein kinase-activated protein kinase 3, [RH, Score=483, Expect=5e-171]} {Mouse: ENSMUSG00000016528, Mapkapk2, MAP kinase-activated protein kinase 2, [RH, Score=486, Expect=1e-172]; ENSMUSG00000032577, Mapkapk3, mitogen-activated protein kinase-activated protein kinase 3, [RH, Score=483, Expect=3e-171]} {Dmel: FBgn0013987, MAPk-Ak2, MAP kinase activated protein-kinase-2, [RH, Score=462, Expect=2e-163]} {Celegans: WBGene00007007, mak-2, MAP kinase-activated protein kinase mak-2, [RH, Score=427, Expect=8e-150]} {Smed: dd_Smed_v6_12176_0_2, dd_Smed_v6_12176_0_2, [RH, Score=473, Expect=3e-168]} {RNA1509_9679} {RNA1310_29554.1} {RNA815_6588}

MligTC455_52702

1145

23.86

Mlig455_000394

Neo: -

Age: -

DSCAML1

0.959

Mlig455_000394 {REF} {Length: 8268} {Pfam: Fibronectin type III domain [PF00041.23, score=177.6]; Immunoglobulin domain [PF13927.8, score=132.6]; Immunoglobulin I-set domain [PF07679.18, score=93.4]; Immunoglobulin domain [PF13895.8, score=76.5]; Immunoglobulin domain [PF00047.27, score=62.7]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=46.6]; Immunoglobulin V-set domain [PF07686.19, score=46.0]} {Human: ENSG00000177103, DSCAML1, DS cell adhesion molecule like 1, [RH, Score=238, Expect=3e-62]} {Mouse: ENSMUSG00000032087, Dscaml1, DS cell adhesion molecule like 1, [RH, Score=239, Expect=2e-62]} {Dmel: FBgn0263219, Dscam4, Down syndrome cell adhesion molecule 4, [Score=218, Expect=3e-56]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=83.2, Expect=2e-15]} {Smed: dd_Smed_v6_3024_0_1, dd_Smed_v6_3024_0_1, [RH, Score=330, Expect=1e-90]} {RNA1509_2497, RNA1509_37795} {RNA1310_1245.1, RNA1509_2497, RNA1509_37795} {RNA1509_2497, RNA1509_37795, RNA815_4978}