TomoSeq data search

Data search

Results for MligTC455_27905

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27905	27686	576.78	Mlig455_036455	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.276	RPS25	Mlig455_036455 {REF} {Length: 537} {TRANSSPLICED} {Pfam: S25 ribosomal protein [PF03297.17, score=151.8]} {Human: ENSG00000280831, RPS25, ribosomal protein S25, [RH, Score=112, Expect=1e-32]; ENSG00000118181, RPS25, ribosomal protein S25, [RH, Score=112, Expect=1e-32]} {Mouse: ENSMUSG00000009927, Rps25, ribosomal protein S25, [RH, Score=128, Expect=1e-39]} {Dmel: FBgn0086472, RpS25, Ribosomal protein S25, [RH, Score=119, Expect=4e-36]} {Celegans: WBGene00004494, rps-25, 40S ribosomal protein S25, [RH, Score=113, Expect=8e-34]} {Smed: dd_Smed_v6_134_0_1, dd_Smed_v6_134_0_1, [RH, Score=105, Expect=2e-30]} {RNA1509_236, RNA1509_3156, RNA1509_49911, RNA1509_7130} {RNA1310_66120.1, RNA1509_236, RNA1509_3156, RNA1509_49911, RNA1509_7130} {RNA1509_236, RNA1509_3156, RNA1509_49911, RNA1509_7130, RNA815_33849}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27905

27686

576.78

Mlig455_036455

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.276

RPS25

Mlig455_036455 {REF} {Length: 537} {TRANSSPLICED} {Pfam: S25 ribosomal protein [PF03297.17, score=151.8]} {Human: ENSG00000280831, RPS25, ribosomal protein S25, [RH, Score=112, Expect=1e-32]; ENSG00000118181, RPS25, ribosomal protein S25, [RH, Score=112, Expect=1e-32]} {Mouse: ENSMUSG00000009927, Rps25, ribosomal protein S25, [RH, Score=128, Expect=1e-39]} {Dmel: FBgn0086472, RpS25, Ribosomal protein S25, [RH, Score=119, Expect=4e-36]} {Celegans: WBGene00004494, rps-25, 40S ribosomal protein S25, [RH, Score=113, Expect=8e-34]} {Smed: dd_Smed_v6_134_0_1, dd_Smed_v6_134_0_1, [RH, Score=105, Expect=2e-30]} {RNA1509_236, RNA1509_3156, RNA1509_49911, RNA1509_7130} {RNA1310_66120.1, RNA1509_236, RNA1509_3156, RNA1509_49911, RNA1509_7130} {RNA1509_236, RNA1509_3156, RNA1509_49911, RNA1509_7130, RNA815_33849}

Cumulative graph for MligTC455_27905

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.251	9.211	0.49416	1.00000
RegionR2	-0.674	9.211	0.04210	0.24000
RegionR3	0.206	9.211	0.46730	0.97396
RegionR4	0.316	9.211	0.30285	0.61607
RegionR5	0.53	9.211	0.04779	0.18158
RegionR6	0.338	9.211	0.22296	0.80347
RegionR7	0.122	9.211	0.65857	1.00000
RegionR8	-0.587	9.211	0.05930	0.47566

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.464	9.211	0.30248	0.99794
RegenerationR2	-0.052	9.211	0.88718	1.00000
RegenerationR3	-0.315	9.211	0.39465	0.79916
RegenerationR4	-0.161	9.211	0.66915	0.94192
RegenerationR5	-0.136	9.211	0.71250	0.95668
RegenerationR6	-0.413	9.211	0.26384	0.61382
RegenerationBL	0.185	9.211	0.55082	0.90760
RegenerationTP	0.264	9.211	0.43162	0.85419

Genes with expression patterns similar to MligTC455_27905

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27905	27686	576.78	Mlig455_036455	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.276	RPS25	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_036455 {REF} {Length: 537} {TRANSSPLICED} {Pfam: S25 ribosomal protein [PF03297.17, score=151.8]} {Human: ENSG00000280831, RPS25, ribosomal protein S25, [RH, Score=112, Expect=1e-32]; ENSG00000118181, RPS25, ribosomal protein S25, [RH, Score=112, Expect=1e-32]} {Mouse: ENSMUSG00000009927, Rps25, ribosomal protein S25, [RH, Score=128, Expect=1e-39]} {Dmel: FBgn0086472, RpS25, Ribosomal protein S25, [RH, Score=119, Expect=4e-36]} {Celegans: WBGene00004494, rps-25, 40S ribosomal protein S25, [RH, Score=113, Expect=8e-34]} {Smed: dd_Smed_v6_134_0_1, dd_Smed_v6_134_0_1, [RH, Score=105, Expect=2e-30]} {RNA1509_236, RNA1509_3156, RNA1509_49911, RNA1509_7130} {RNA1310_66120.1, RNA1509_236, RNA1509_3156, RNA1509_49911, RNA1509_7130} {RNA1509_236, RNA1509_3156, RNA1509_49911, RNA1509_7130, RNA815_33849}
2.	MligTC455_21841	18387	383.05	Mlig455_020821	Neo: Int S/G2/M Age: Down-Up-Down	RPL27A	2.433	0.776	-	-	-	0.952	0.705	Mlig455_020821 {REF} {Length: 604} {TRANSSPLICED} {Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A [PF00828.21, score=65.4]} {Human: ENSG00000166441, RPL27A, ribosomal protein L27a, [RH, Score=224, Expect=4e-76]} {Mouse: ENSMUSG00000046364, Rpl27a, ribosomal protein L27A, [RH, Score=224, Expect=4e-76]} {Dmel: FBgn0285948, RpL27A, Ribosomal protein L27A, [RH, Score=208, Expect=3e-70]} {Celegans: WBGene00021350, Y37E3.8, [RH, Score=212, Expect=7e-72]} {Smed: dd_Smed_v6_155_1_1, dd_Smed_v6_155_1_1, [RH, Score=242, Expect=1e-83]} {RNA1509_59744, RNA1509_6380} {RNA1310_59978, RNA1509_59744} {RNA1509_59744, RNA815_11321.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_27905

27686

576.78

Mlig455_036455

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.276

RPS25

1.000

MligTC455_21841

18387

383.05

Mlig455_020821

Neo: Int S/G2/M

Age: Down-Up-Down

RPL27A

2.433

0.776

0.952

0.705

Mlig455_020821 {REF} {Length: 604} {TRANSSPLICED} {Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A [PF00828.21, score=65.4]} {Human: ENSG00000166441, RPL27A, ribosomal protein L27a, [RH, Score=224, Expect=4e-76]} {Mouse: ENSMUSG00000046364, Rpl27a, ribosomal protein L27A, [RH, Score=224, Expect=4e-76]} {Dmel: FBgn0285948, RpL27A, Ribosomal protein L27A, [RH, Score=208, Expect=3e-70]} {Celegans: WBGene00021350, Y37E3.8, [RH, Score=212, Expect=7e-72]} {Smed: dd_Smed_v6_155_1_1, dd_Smed_v6_155_1_1, [RH, Score=242, Expect=1e-83]} {RNA1509_59744, RNA1509_6380} {RNA1310_59978, RNA1509_59744} {RNA1509_59744, RNA815_11321.1}