TomoSeq data search

Data search

Results for MligTC455_27920

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27920	3	0.07	Mlig455_033696	Neo: - Age: logFC(26M/2M)=0.541	KLHDC8B	Mlig455_033696 {REF} {Length: 1165} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=92.1]; Kelch motif [PF13964.8, score=86.7]; Galactose oxidase, central domain [PF13418.8, score=56.8]; Galactose oxidase, central domain [PF13415.8, score=52.6]; Kelch motif [PF13854.8, score=36.9]; Kelch motif [PF07646.17, score=33.0]; Protein of unknown function (DUF1668) [PF07893.15, score=25.2]} {Human: ENSG00000185909, KLHDC8B, kelch domain containing 8B, [Score=129, Expect=3e-34]; ENSG00000162873, KLHDC8A, kelch domain containing 8A, [Score=123, Expect=4e-32]} {Mouse: ENSMUSG00000032609, Klhdc8b, kelch domain containing 8B, [Score=129, Expect=2e-34]; ENSMUSG00000042115, Klhdc8a, kelch domain containing 8A, [Score=123, Expect=3e-32]} {Dmel: FBgn0040230, dbo, diablo, [Score=61.6, Expect=2e-10]} {Celegans: WBGene00004972, spe-26, Spermatocyte protein spe-26, [Score=49.7, Expect=1e-06]} {Smed: dd_Smed_v6_2508_0_1, dd_Smed_v6_2508_0_1, [Score=125, Expect=1e-33]} {RNA1509_20477} {RNA1310_11616} {RNA815_11073}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27920

0.07

Mlig455_033696

Neo: -

Age: logFC(26M/2M)=0.541

KLHDC8B

Mlig455_033696 {REF} {Length: 1165} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=92.1]; Kelch motif [PF13964.8, score=86.7]; Galactose oxidase, central domain [PF13418.8, score=56.8]; Galactose oxidase, central domain [PF13415.8, score=52.6]; Kelch motif [PF13854.8, score=36.9]; Kelch motif [PF07646.17, score=33.0]; Protein of unknown function (DUF1668) [PF07893.15, score=25.2]} {Human: ENSG00000185909, KLHDC8B, kelch domain containing 8B, [Score=129, Expect=3e-34]; ENSG00000162873, KLHDC8A, kelch domain containing 8A, [Score=123, Expect=4e-32]} {Mouse: ENSMUSG00000032609, Klhdc8b, kelch domain containing 8B, [Score=129, Expect=2e-34]; ENSMUSG00000042115, Klhdc8a, kelch domain containing 8A, [Score=123, Expect=3e-32]} {Dmel: FBgn0040230, dbo, diablo, [Score=61.6, Expect=2e-10]} {Celegans: WBGene00004972, spe-26, Spermatocyte protein spe-26, [Score=49.7, Expect=1e-06]} {Smed: dd_Smed_v6_2508_0_1, dd_Smed_v6_2508_0_1, [Score=125, Expect=1e-33]} {RNA1509_20477} {RNA1310_11616} {RNA815_11073}

Cumulative graph for MligTC455_27920

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_27920

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27920	3	0.07	Mlig455_033696	Neo: - Age: logFC(26M/2M)=0.541	KLHDC8B	1	-	-	-	-	-	1.000	Mlig455_033696 {REF} {Length: 1165} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=92.1]; Kelch motif [PF13964.8, score=86.7]; Galactose oxidase, central domain [PF13418.8, score=56.8]; Galactose oxidase, central domain [PF13415.8, score=52.6]; Kelch motif [PF13854.8, score=36.9]; Kelch motif [PF07646.17, score=33.0]; Protein of unknown function (DUF1668) [PF07893.15, score=25.2]} {Human: ENSG00000185909, KLHDC8B, kelch domain containing 8B, [Score=129, Expect=3e-34]; ENSG00000162873, KLHDC8A, kelch domain containing 8A, [Score=123, Expect=4e-32]} {Mouse: ENSMUSG00000032609, Klhdc8b, kelch domain containing 8B, [Score=129, Expect=2e-34]; ENSMUSG00000042115, Klhdc8a, kelch domain containing 8A, [Score=123, Expect=3e-32]} {Dmel: FBgn0040230, dbo, diablo, [Score=61.6, Expect=2e-10]} {Celegans: WBGene00004972, spe-26, Spermatocyte protein spe-26, [Score=49.7, Expect=1e-06]} {Smed: dd_Smed_v6_2508_0_1, dd_Smed_v6_2508_0_1, [Score=125, Expect=1e-33]} {RNA1509_20477} {RNA1310_11616} {RNA815_11073}
2.	MligTC455_35426	27	0.55	Mlig455_043708, Mlig455_043796, Mlig455_047447	Neo: - Age: - Region-enriched R4: 3.107/0.04694	COG2, TRAF3, TRAF6	0.983	-	-	-	-	-	0.983	Mlig455_043708 {REF} {Length: 2314} {Pfam: TRAF-type zinc finger [PF02176.20, score=41.5]; Seven in absentia protein family [PF03145.18, score=23.6]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=161, Expect=1e-41]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=158, Expect=6e-41]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=83.6, Expect=1e-16]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=69.3, Expect=4e-12]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=103, Expect=2e-23]} {RNA1509_50896} {RNA1310_6468} {RNA815_1472} Mlig455_043796 {REF} {Length: 4177} {TRANSSPLICED} {Pfam: COG (conserved oligomeric Golgi) complex component, COG2 [PF06148.13, score=104.6]; Domain of unknown function (DUF3510) [PF12022.10, score=94.3]; TRAF-type zinc finger [PF02176.20, score=30.8]} {Human: ENSG00000135775, COG2, component of oligomeric golgi complex 2, [Score=280, Expect=6e-80]} {Mouse: ENSMUSG00000031979, Cog2, component of oligomeric golgi complex 2, [Score=274, Expect=5e-78]} {Dmel: FBgn0026634, ldlCp, ldlCp-related protein, [Score=196, Expect=5e-52]} {Celegans: WBGene00000585, cogc-2, Conserved oligomeric Golgi complex subunit 2, [Score=132, Expect=3e-31]} {Smed: dd_Smed_v6_5210_0_1, dd_Smed_v6_5210_0_1, [Score=276, Expect=9e-79]} {RNA1509_17078} {RNA1310_5891} {RNA815_1472} Mlig455_047447 {REF} {Length: 1314} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=34.2]; Seven in absentia protein family [PF03145.18, score=19.2]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=96.7, Expect=4e-21]} {Mouse: ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=90.9, Expect=2e-19]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=100, Expect=4e-23]} {RNA1509_12449} {RNA1310_8751} {RNA815_1472}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_27920

0.07

Mlig455_033696

Neo: -

Age: logFC(26M/2M)=0.541

KLHDC8B

1.000

MligTC455_35426

0.55

Mlig455_043708, Mlig455_043796, Mlig455_047447

Neo: -

Age: -

Region-enriched R4: 3.107/0.04694

COG2, TRAF3, TRAF6

0.983

Mlig455_043708 {REF} {Length: 2314} {Pfam: TRAF-type zinc finger [PF02176.20, score=41.5]; Seven in absentia protein family [PF03145.18, score=23.6]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=161, Expect=1e-41]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=158, Expect=6e-41]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=83.6, Expect=1e-16]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=69.3, Expect=4e-12]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=103, Expect=2e-23]} {RNA1509_50896} {RNA1310_6468} {RNA815_1472}

Mlig455_043796 {REF} {Length: 4177} {TRANSSPLICED} {Pfam: COG (conserved oligomeric Golgi) complex component, COG2 [PF06148.13, score=104.6]; Domain of unknown function (DUF3510) [PF12022.10, score=94.3]; TRAF-type zinc finger [PF02176.20, score=30.8]} {Human: ENSG00000135775, COG2, component of oligomeric golgi complex 2, [Score=280, Expect=6e-80]} {Mouse: ENSMUSG00000031979, Cog2, component of oligomeric golgi complex 2, [Score=274, Expect=5e-78]} {Dmel: FBgn0026634, ldlCp, ldlCp-related protein, [Score=196, Expect=5e-52]} {Celegans: WBGene00000585, cogc-2, Conserved oligomeric Golgi complex subunit 2, [Score=132, Expect=3e-31]} {Smed: dd_Smed_v6_5210_0_1, dd_Smed_v6_5210_0_1, [Score=276, Expect=9e-79]} {RNA1509_17078} {RNA1310_5891} {RNA815_1472}

Mlig455_047447 {REF} {Length: 1314} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=34.2]; Seven in absentia protein family [PF03145.18, score=19.2]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=96.7, Expect=4e-21]} {Mouse: ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=90.9, Expect=2e-19]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=100, Expect=4e-23]} {RNA1509_12449} {RNA1310_8751} {RNA815_1472}