TomoSeq data search

Data search

Results for MligTC455_27935

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27935	22	0.45	Mlig455_006462	Neo: - Age: -		Mlig455_006462 {REF} {Length: 978} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_82298} {RNA815_58175}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_27935

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.195	0.845	0.99960	1.00000
RegionR2	-3.912	0.845	0.99964	1.00000
RegionR3	2.047	0.845	0.08851	0.52562
RegionR4	4.952	0.845	0.01741	0.09229
RegionR5	1.19	0.845	0.21486	0.51371
RegionR6	1.497	0.845	0.45233	1.00000
RegionR7	-3.426	0.845	1.00000	1.00000
RegionR8	-3.542	0.845	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.857	0.845	1.00000	1.00000
RegenerationR2	3.369	0.845	0.04150	0.33640
RegenerationR3	-1.404	0.845	0.30015	0.73169
RegenerationR4	-1.053	0.845	0.41414	0.82272
RegenerationR5	0.714	0.845	0.92230	1.00000
RegenerationR6	-0.018	0.845	0.79455	0.97449
RegenerationBL	0.014	0.845	0.99979	1.00000
RegenerationTP	2.582	0.845	0.40394	0.83185

Genes with expression patterns similar to MligTC455_27935

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27935	22	0.45	Mlig455_006462	Neo: - Age: -		2	-	-	-	1.000	-	1.000	Mlig455_006462 {REF} {Length: 978} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_82298} {RNA815_58175}
2.	MligTC455_19124	68	1.41	Mlig455_056714	Neo: - Age: Up-Down-Up	NPFFR1	0.982	-	-	-	0.982	-	-	Mlig455_056714 {REF} {Length: 3702} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=113.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=23.3]} {Human: ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=90.1, Expect=1e-18]; ENSG00000137252, HCRTR2, hypocretin receptor 2, [Score=87.8, Expect=6e-18]} {Mouse: ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=105, Expect=2e-24]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=131, Expect=7e-33]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=100, Expect=1e-22]} {Smed: dd_Smed_v6_26109_0_1, dd_Smed_v6_26109_0_1, [RH, Score=210, Expect=4e-61]} {RNA1509_34547} {RNA1310_9062, RNA1509_34547} {RNA1509_34547, RNA815_6805}
3.	MligTC455_39599	28	0.59	Mlig455_051652	Neo: - Age: -	SRSF10	0.952	-	-	-	-	-	0.952	Mlig455_051652 {REF} {Length: 996} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=66.5]} {Human: ENSG00000188529, SRSF10, serine and arginine rich splicing factor 10, [RH, Score=89.7, Expect=2e-20]} {Mouse: ENSMUSG00000028676, Srsf10, serine/arginine-rich splicing factor 10, [RH, Score=89.7, Expect=1e-20]; ENSMUSG00000054679, Srsf12, serine/arginine-rich splicing factor 12, [RH, Score=88.6, Expect=3e-20]} {Dmel: FBgn0263829, CG34334, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00004387, rnp-4, RNA-binding protein 8A, [Score=65.1, Expect=5e-13]} {Smed: dd_Smed_v6_661_0_6, dd_Smed_v6_661_0_6, [RH, Score=102, Expect=1e-27]} {RNA1509_1745} {RNA1310_13715.1} {RNA815_6033.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_27935

0.45

Mlig455_006462

Neo: -

Age: -

1.000

Mlig455_006462 {REF} {Length: 978} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_82298} {RNA815_58175}

MligTC455_19124

1.41

Mlig455_056714

Neo: -

Age: Up-Down-Up

NPFFR1

0.982

Mlig455_056714 {REF} {Length: 3702} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=113.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=23.3]} {Human: ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=90.1, Expect=1e-18]; ENSG00000137252, HCRTR2, hypocretin receptor 2, [Score=87.8, Expect=6e-18]} {Mouse: ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=105, Expect=2e-24]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=131, Expect=7e-33]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=100, Expect=1e-22]} {Smed: dd_Smed_v6_26109_0_1, dd_Smed_v6_26109_0_1, [RH, Score=210, Expect=4e-61]} {RNA1509_34547} {RNA1310_9062, RNA1509_34547} {RNA1509_34547, RNA815_6805}

MligTC455_39599

0.59

Mlig455_051652

Neo: -

Age: -

SRSF10

0.952

Mlig455_051652 {REF} {Length: 996} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=66.5]} {Human: ENSG00000188529, SRSF10, serine and arginine rich splicing factor 10, [RH, Score=89.7, Expect=2e-20]} {Mouse: ENSMUSG00000028676, Srsf10, serine/arginine-rich splicing factor 10, [RH, Score=89.7, Expect=1e-20]; ENSMUSG00000054679, Srsf12, serine/arginine-rich splicing factor 12, [RH, Score=88.6, Expect=3e-20]} {Dmel: FBgn0263829, CG34334, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00004387, rnp-4, RNA-binding protein 8A, [Score=65.1, Expect=5e-13]} {Smed: dd_Smed_v6_661_0_6, dd_Smed_v6_661_0_6, [RH, Score=102, Expect=1e-27]} {RNA1509_1745} {RNA1310_13715.1} {RNA815_6033.1}