Data search
Results for MligTC455_27964
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27964 | 1716 | 35.75 | Mlig455_039745 | Neo: - Age: Up-Down-Up Region-enriched R7: 2.015/0.02271 |
Mlig455_039745 {REF} {Length: 783} {Smed: dd_Smed_v6_1483_0_1, dd_Smed_v6_1483_0_1, [Score=48.5, Expect=6e-08]} {RNA1509_55770} {RNA1310_68229} {RNA815_28504} |
Cumulative graph for MligTC455_27964
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.968 | 5.334 | 0.42253 | 1.00000 | |
| RegionR2 | 0.738 | 5.334 | 0.30699 | 0.69760 | |
| RegionR3 | -0.133 | 5.334 | 0.83858 | 1.00000 | |
| RegionR4 | -0.771 | 5.334 | 0.33035 | 0.64856 | |
| RegionR5 | -1.788 | 5.334 | 0.01336 | 0.07144 | |
| RegionR6 | 1.733 | 5.334 | 0.00297 | 0.07844 | |
| RegionR7 | 2.015 | 5.334 | 0.00057 | 0.02271 | |
| RegionR8 | -0.826 | 5.334 | 0.33994 | 0.97393 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.281 | 5.334 | 0.85154 | 1.00000 | |
| RegenerationR2 | -0.174 | 5.334 | 0.81407 | 0.99411 | |
| RegenerationR3 | -0.352 | 5.334 | 0.64720 | 0.92776 | |
| RegenerationR4 | 0.222 | 5.334 | 0.77952 | 0.98017 | |
| RegenerationR5 | 0.677 | 5.334 | 0.40255 | 0.80050 | |
| RegenerationR6 | -1.292 | 5.334 | 0.09447 | 0.38205 | |
| RegenerationBL | -1.854 | 5.334 | 0.02041 | 0.15482 | |
| RegenerationTP | 0.47 | 5.334 | 0.58070 | 0.95003 |
Genes with expression patterns similar to MligTC455_27964
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27964 | 1716 | 35.75 | Mlig455_039745 | Neo: - Age: Up-Down-Up Region-enriched R7: 2.015/0.02271 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_039745 {REF} {Length: 783} {Smed: dd_Smed_v6_1483_0_1, dd_Smed_v6_1483_0_1, [Score=48.5, Expect=6e-08]} {RNA1509_55770} {RNA1310_68229} {RNA815_28504} | |
| 2. | MligTC455_27963 | 8653 | 180.26 | Mlig455_039688 | Neo: - Age: Down-Up-Up Region-enriched R7: 2.206/0.00003 Regeneration-downregulated BL: -3.093 Regeneration-depleted BL: -3.093 |
5.73 | 0.938 | 0.970 | 0.969 | 0.954 | 0.926 | 0.973 | Mlig455_039688 {REF} {Length: 1076} {Smed: dd_Smed_v6_2575_0_1, dd_Smed_v6_2575_0_1, [Score=49.7, Expect=2e-08]} {RNA1509_36512, RNA1509_55770} {RNA1310_68229, RNA1509_36512} {RNA1509_36512, RNA815_28504} | |
| 3. | MligTC455_15645 | 14723 | 306.72 | Mlig455_015733, Mlig455_049437 | Neo: - Age: Down-Down-Up Region-enriched R7: 1.492/0.00234 Regeneration-downregulated BL: -2.677 Regeneration-depleted BL: -2.677 |
4.577 | 0.860 | 0.919 | 0.914 | 0.970 | - | 0.914 | Mlig455_015733 {REF} {Length: 960} {Pfam: SLBB domain [PF10531.11, score=20.2]} {RNA1509_3484} {RNA1310_43598.2} {RNA815_17382} Mlig455_049437 {REF} {Length: 994} {Pfam: YtkA-like [PF13115.8, score=24.2]} {RNA1509_3484} {RNA1310_43598.2} {RNA815_17382} |
|
| 4. | MligTC455_44845 | 96 | 2 | Mlig455_063520 | Neo: - Age: - |
LHX5 | 1.721 | - | - | - | 0.972 | - | 0.749 | Mlig455_063520 {REF} {Length: 4042} {Pfam: LIM domain [PF00412.24, score=116.9]; Homeodomain [PF00046.31, score=69.5]; Homeobox KN domain [PF05920.13, score=24.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=19.8]} {Human: ENSG00000089116, LHX5, LIM homeobox 5, [Score=208, Expect=9e-59]; ENSG00000273706, LHX1, LIM homeobox 1, [Score=199, Expect=1e-55]; ENSG00000274577, LHX1, LIM homeobox 1, [Score=199, Expect=1e-55]} {Mouse: ENSMUSG00000029595, Lhx5, LIM homeobox protein 5, [Score=207, Expect=1e-58]; ENSMUSG00000018698, Lhx1, LIM homeobox protein 1, [Score=199, Expect=1e-55]} {Dmel: FBgn0026411, Lim1, LIM homeobox 1, [Score=191, Expect=3e-52]} {Celegans: WBGene00003000, lin-11, [Score=141, Expect=6e-36]} {Smed: dd_Smed_v6_11521_0_1, dd_Smed_v6_11521_0_1, [RH, Score=185, Expect=5e-49]} {RNA1509_55597} {RNA1310_42478} {RNA815_25756} |
| 5. | MligTC455_24761 | 13620 | 283.74 | Mlig455_039154 | Neo: - Age: - Region-enriched R7: 1.855/0.00000 Regeneration-depleted BL: -2.239 |
1.664 | - | 0.702 | - | - | - | 0.962 | Mlig455_039154 {REF} {Length: 1176} {TRANSSPLICED} {RNA1509_1669, RNA1509_32817, RNA1509_47614, RNA1509_4767, RNA1509_50169} {RNA1310_33888, RNA1509_1669, RNA1509_32817, RNA1509_47614, RNA1509_4767, RNA1509_50169} {RNA1509_1669, RNA1509_32817, RNA1509_47614, RNA1509_4767, RNA1509_50169, RNA815_17199} | |
| 6. | MligTC455_36679 | 4666 | 97.21 | Mlig455_049598 | Neo: - Age: logFC(26M/2M)=-0.429 Region-enriched R8: 3.151/0.00004 |
0.976 | - | - | - | - | - | 0.976 | Mlig455_049598 {REF} {Length: 1229} {RNA1509_20268, RNA1509_24976} {RNA1310_46724, RNA1509_24976} {RNA1509_24976, RNA815_46768} | |
| 7. | MligTC455_26323 | 2191 | 45.64 | Mlig455_027309 | Neo: - Age: - Region-enriched R6: 3.346/0.00002 |
0.961 | - | - | - | 0.961 | - | - | Mlig455_027309 {REF} {Length: 759} {Smed: dd_Smed_v6_1588_0_1, dd_Smed_v6_1588_0_1, [Score=42.0, Expect=2e-06]} {RNA1509_6938} {RNA1310_54464.1, RNA1509_6938} {RNA1509_6938, RNA815_23024.1} | |
| 8. | MligTC455_24762 | 9096 | 189.51 | Mlig455_051668 | Neo: - Age: - Region-enriched R8: 2.093/0.00000 Regeneration-depleted BL: -1.998 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_051668 {REF} {Length: 931} {TRANSSPLICED} {RNA1509_50169} {RNA1310_42658} {RNA815_17706} | |
| 9. | MligTC455_54231 | 270 | 5.62 | Mlig455_059344 | Neo: - Age: logFC(26M/2M)=-0.427 |
0.956 | - | - | - | 0.956 | - | - | Mlig455_059344 {REF} {Length: 1419} {RNA1310_28936} {RNA815_10014.1} | |
| 10. | MligTC455_37005 | 759 | 15.82 | Mlig455_062895 | Neo: - Age: logFC(26M/2M)=-0.530 Region-enriched R2: 2.906/0.01531 |
SLC5A12 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_062895 {REF} {Length: 3080} {Pfam: Sodium:solute symporter family [PF00474.19, score=141.8]} {Human: ENSG00000148942, SLC5A12, solute carrier family 5 member 12, [RH, Score=452, Expect=1e-151]; ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [RH, Score=444, Expect=1e-148]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [RH, Score=444, Expect=1e-148]} {Mouse: ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [RH, Score=458, Expect=4e-154]; ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [RH, Score=436, Expect=1e-145]} {Dmel: FBgn0034494, CG10444, [RH, Score=412, Expect=6e-137]} {Celegans: WBGene00014092, ZK822.5, [RH, Score=273, Expect=2e-83]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [RH, Score=481, Expect=6e-164]} {RNA1509_28319, RNA1509_8499} {RNA1310_12282.1, RNA1509_28319, RNA1509_8499} {RNA1509_28319, RNA1509_8499, RNA815_4467} |
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