Data search
Results for MligTC455_27966
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27966 | 259 | 5.40 | Mlig455_031946 | Neo: - |
Mlig455_031946 {REF} {Length: 4812} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=42.3]} {RNA1509_32137} {RNA1310_3951} {RNA815_1309} |
Cumulative graph for MligTC455_27966
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.469 | 2.625 | 0.28753 | 0.93951 | |
| RegionR2 | -0.386 | 2.625 | 0.62969 | 0.97070 | |
| RegionR3 | -0.302 | 2.625 | 0.64851 | 1.00000 | |
| RegionR4 | -0.009 | 2.625 | 0.98470 | 1.00000 | |
| RegionR5 | -0.545 | 2.625 | 0.38602 | 0.74136 | |
| RegionR6 | -0.328 | 2.625 | 0.62639 | 1.00000 | |
| RegionR7 | -1.32 | 2.625 | 0.21395 | 0.83021 | |
| RegionR8 | 1.421 | 2.625 | 0.14437 | 0.69341 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.269 | 2.625 | 0.45916 | 1.00000 | |
| RegenerationR2 | -1.636 | 2.625 | 0.03996 | 0.33053 | |
| RegenerationR3 | -0.702 | 2.625 | 0.35584 | 0.77370 | |
| RegenerationR4 | -1.19 | 2.625 | 0.10993 | 0.50921 | |
| RegenerationR5 | -0.869 | 2.625 | 0.24777 | 0.68109 | |
| RegenerationR6 | -1.27 | 2.625 | 0.12941 | 0.44226 | |
| RegenerationBL | -2.54 | 2.625 | 0.03540 | 0.21197 | |
| RegenerationTP | -0.566 | 2.625 | 0.57668 | 0.94761 |
Genes with expression patterns similar to MligTC455_27966
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27966 | 259 | 5.4 | Mlig455_031946 | Neo: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031946 {REF} {Length: 4812} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=42.3]} {RNA1509_32137} {RNA1310_3951} {RNA815_1309} | |
| 2. | MligTC455_41462 | 113 | 2.36 | Mlig455_015878 | Neo: - Age: - |
1.708 | - | - | - | 0.960 | 0.748 | - | Mlig455_015878 {REF} {Length: 654} {NoTransDecoderORF} | |
| 3. | MligTC455_29996 | 290 | 6.04 | Mlig455_042554 | Neo: - Age: logFC(26M/2M)=-0.341 |
FGA | 0.956 | - | - | - | 0.956 | - | - | Mlig455_042554 {REF} {Length: 2686} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=116.8]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=99.8, Expect=4e-21]; ENSG00000171557, FGG, fibrinogen gamma chain, [Score=95.5, Expect=3e-20]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=95.5, Expect=5e-22]} {Mouse: ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=97.8, Expect=1e-20]; ENSMUSG00000033860, Fgg, fibrinogen gamma chain, [Score=96.7, Expect=8e-21]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=95.5, Expect=3e-20]} {Dmel: FBgn0051832, CG31832, [Score=86.3, Expect=9e-19]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=107, Expect=4e-24]} {RNA1509_42640} {RNA1310_14812, RNA1509_42640} {RNA1509_42640, RNA815_6799.1} |
| 4. | MligTC455_11992 | 547 | 11.4 | Mlig455_070918 | Neo: Irradiation Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_070918 {REF} {Length: 2532} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=30.1]} {RNA1509_24959, RNA1509_52445} {RNA1310_2279.2, RNA1509_24959} {RNA1509_24959, RNA815_17518} | |
| 5. | MligTC455_26620 | 34 | 0.7 | Mlig455_008129, Mlig455_008132 | Neo: - Age: Up-Down-Down |
0.952 | - | - | - | - | 0.952 | - | Mlig455_008129 {REF} {Length: 1793} {NoTransDecoderORF} {RNA1509_17614} {RNA1310_15562} {RNA815_5625.1} Mlig455_008132 {REF} {Length: 2431} {NoTransDecoderORF} {RNA1509_17614} {RNA1310_15562} {RNA815_5625.1} |
Berezikov Lab - 2020-2021 © ERIBA