Data search
Results for MligTC455_27987
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27987 | 40 | 0.83 | Mlig455_028975 | Neo: - Age: - |
RTL1 | Mlig455_028975 {REF} {Length: 5246} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=107.2]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=47.0, Expect=1e-05]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=180, Expect=1e-53]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1} |
Cumulative graph for MligTC455_27987
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.675 | 1.115 | 0.64966 | 1.00000 | |
| RegionR2 | 1.918 | 1.115 | 0.25269 | 0.63215 | |
| RegionR3 | -1.497 | 1.115 | 0.99735 | 1.00000 | |
| RegionR4 | -0.274 | 1.115 | 0.87653 | 1.00000 | |
| RegionR5 | -2.241 | 1.115 | 0.99945 | 1.00000 | |
| RegionR6 | -1.537 | 1.115 | 0.99743 | 1.00000 | |
| RegionR7 | 3.829 | 1.115 | 0.00761 | 0.14528 | |
| RegionR8 | -1.873 | 1.115 | 0.61316 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.083 | 1.115 | 0.59437 | 1.00000 | |
| RegenerationR2 | -1.525 | 1.115 | 0.13608 | 0.56311 | |
| RegenerationR3 | 1.271 | 1.115 | 0.41034 | 0.80896 | |
| RegenerationR4 | 0.078 | 1.115 | 0.99834 | 1.00000 | |
| RegenerationR5 | 2.309 | 1.115 | 0.07192 | 0.42090 | |
| RegenerationR6 | 1.826 | 1.115 | 0.24914 | 0.59787 | |
| RegenerationBL | -0.01 | 1.115 | 0.82308 | 1.00000 | |
| RegenerationTP | -3.354 | 1.115 | 0.99952 | 1.00000 |
Genes with expression patterns similar to MligTC455_27987
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27987 | 40 | 0.83 | Mlig455_028975 | Neo: - Age: - |
RTL1 | 3 | - | - | 1.000 | - | 1.000 | 1.000 | Mlig455_028975 {REF} {Length: 5246} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=107.2]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=47.0, Expect=1e-05]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=180, Expect=1e-53]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1} |
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