TomoSeq data search

Data search

Results for MligTC455_28005

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28005

553

11.51

Mlig455_000963

Neo: -

Age: -

TRPM3

Mlig455_000963 {REF} {Length: 7517} {TRANSSPLICED} {Pfam: SLOG in TRPM [PF18139.3, score=288.7]; SLOG in TRPM, prokaryote [PF18171.3, score=51.2]; Ion transport protein [PF00520.33, score=34.3]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [RH, Score=511, Expect=9e-152]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [RH, Score=511, Expect=5e-152]; ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [RH, Score=496, Expect=6e-146]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [RH, Score=535, Expect=1e-158]} {Celegans: WBGene00001795, gtl-1, GTL-1; Gon-Two Like (TRP subfamily), [RH, Score=578, Expect=2e-176]} {Smed: dd_Smed_v6_11377_0_2, dd_Smed_v6_11377_0_2, [RH, Score=568, Expect=2e-172]} {RNA1509_13381, RNA1509_33766, RNA1509_52593} {RNA1310_907.1, RNA1509_13381, RNA1509_33766, RNA1509_52593} {RNA1509_13381, RNA1509_33766, RNA1509_52593, RNA815_2587}

Cumulative graph for MligTC455_28005

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.115	3.802	0.92200	1.00000
RegionR2	0.335	3.802	0.49139	0.87256
RegionR3	0.18	3.802	0.63239	1.00000
RegionR4	0.236	3.802	0.62615	0.93527
RegionR5	0.192	3.802	0.58097	0.93961
RegionR6	-0.563	3.802	0.18775	0.75381
RegionR7	0.367	3.802	0.45503	1.00000
RegionR8	-0.861	3.802	0.21191	0.81608

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.07	3.802	0.96776	1.00000
RegenerationR2	0.171	3.802	0.65964	0.94134
RegenerationR3	0.01	3.802	0.98337	1.00000
RegenerationR4	0.309	3.802	0.52422	0.88139
RegenerationR5	0.141	3.802	0.73200	0.96465
RegenerationR6	0.732	3.802	0.13895	0.45696
RegenerationBL	0.433	3.802	0.47883	0.84420
RegenerationTP	0.425	3.802	0.48167	0.88923

Genes with expression patterns similar to MligTC455_28005

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28005	553	11.51	Mlig455_000963	Neo: - Age: -	TRPM3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_000963 {REF} {Length: 7517} {TRANSSPLICED} {Pfam: SLOG in TRPM [PF18139.3, score=288.7]; SLOG in TRPM, prokaryote [PF18171.3, score=51.2]; Ion transport protein [PF00520.33, score=34.3]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [RH, Score=511, Expect=9e-152]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [RH, Score=511, Expect=5e-152]; ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [RH, Score=496, Expect=6e-146]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [RH, Score=535, Expect=1e-158]} {Celegans: WBGene00001795, gtl-1, GTL-1; Gon-Two Like (TRP subfamily), [RH, Score=578, Expect=2e-176]} {Smed: dd_Smed_v6_11377_0_2, dd_Smed_v6_11377_0_2, [RH, Score=568, Expect=2e-172]} {RNA1509_13381, RNA1509_33766, RNA1509_52593} {RNA1310_907.1, RNA1509_13381, RNA1509_33766, RNA1509_52593} {RNA1509_13381, RNA1509_33766, RNA1509_52593, RNA815_2587}
2.	MligTC455_52052	1717	35.78	Mlig455_057784	Neo: - Age: -		1.66	-	-	-	0.703	-	0.957	Mlig455_057784 {REF} {Length: 1949} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=69.0]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [Score=85.1, Expect=5e-21]} {RNA1509_19601, RNA1509_22256, RNA1509_31639, RNA1509_9185} {RNA1310_15109.1, RNA1509_19601, RNA1509_22256, RNA1509_31639, RNA1509_9185} {RNA1509_19601, RNA1509_22256, RNA1509_31639, RNA1509_9185, RNA815_6173}
3.	MligTC455_40218	801	16.69	Mlig455_013163	Neo: Int S/G2/M Age: -		0.969	-	-	-	-	-	0.969	Mlig455_013163 {REF} {Length: 1228} {RNA1509_14011, RNA1509_31133} {RNA1310_32604, RNA1509_31133} {RNA1509_31133, RNA815_11423.1}
4.	MligTC455_25232	806	16.79	Mlig455_028493	Neo: - Age: -	TRPM6	0.962	-	-	-	-	-	0.962	Mlig455_028493 {REF} {Length: 8508} {TRANSSPLICED} {Pfam: SLOG in TRPM [PF18139.3, score=289.6]; SLOG in TRPM, prokaryote [PF18171.3, score=53.5]; Ion transport protein [PF00520.33, score=27.5]} {Human: ENSG00000119121, TRPM6, transient receptor potential cation channel subfamily M member 6, [Score=452, Expect=2e-129]} {Mouse: ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=465, Expect=2e-134]; ENSMUSG00000024727, Trpm6, transient receptor potential cation channel, subfamily M, member 6, [Score=459, Expect=5e-132]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=412, Expect=5e-121]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=649, Expect=0.0]} {Smed: dd_Smed_v6_11377_0_1, dd_Smed_v6_11377_0_1, [RH, Score=434, Expect=3e-128]} {RNA1509_4632} {RNA1310_693.1, RNA1509_4632} {RNA1509_4632, RNA815_645}
5.	MligTC455_28123	556	11.59	Mlig455_000454, Mlig455_005005, Mlig455_015548	Neo: - Age: Up-Down-Up		0.954	-	-	-	-	-	0.954	Mlig455_000454 {REF} {Length: 4463} {NoTransDecoderORF} {RNA1509_53435} {RNA1310_28599} {RNA815_11419.1} Mlig455_005005 {REF} {Length: 603} {RNA1509_25657} {RNA1310_41739} {RNA815_26110} Mlig455_015548 {REF} {Length: 4365} {NoTransDecoderORF} {RNA1509_53435} {RNA1310_34828.2} {RNA815_11419.1}
6.	MligTC455_29174	725	15.11	Mlig455_039689	Neo: - Age: Up-Down-Down	TSPAN15	0.952	-	-	-	-	-	0.952	Mlig455_039689 {REF} {Length: 6002} {Pfam: Tetraspanin family [PF00335.22, score=97.2]} {Human: ENSG00000099282, TSPAN15, tetraspanin 15, [Score=52.8, Expect=2e-07]} {Mouse: ENSMUSG00000025351, Cd63, CD63 antigen, [Score=61.2, Expect=9e-11]} {Dmel: FBgn0029507, Tsp42Ed, Tetraspanin 42Ed, [Score=64.3, Expect=5e-12]} {Celegans: WBGene00006643, tsp-17, TetraSPanin family, [Score=54.3, Expect=1e-08]} {Smed: dd_Smed_v6_2693_0_1, dd_Smed_v6_2693_0_1, [Score=74.7, Expect=6e-16]} {RNA1509_37574, RNA1509_52095} {RNA1310_17930.1, RNA1509_37574, RNA1509_52095} {RNA1509_37574, RNA1509_52095, RNA815_6889}
7.	MligTC455_29175	609	12.69	Mlig455_039746	Neo: - Age: logFC(26M/2M)=0.300	TSPAN9	0.951	-	-	-	-	-	0.951	Mlig455_039746 {REF} {Length: 3617} {Pfam: Tetraspanin family [PF00335.22, score=97.7]} {Human: ENSG00000011105, TSPAN9, tetraspanin 9, [Score=59.7, Expect=4e-10]} {Mouse: ENSMUSG00000025351, Cd63, CD63 antigen, [Score=61.6, Expect=7e-11]} {Dmel: FBgn0029507, Tsp42Ed, Tetraspanin 42Ed, [Score=64.7, Expect=3e-12]} {Celegans: WBGene00006643, tsp-17, TetraSPanin family, [Score=54.7, Expect=1e-08]} {Smed: dd_Smed_v6_2693_0_1, dd_Smed_v6_2693_0_1, [Score=71.6, Expect=9e-15]} {RNA1509_31491, RNA1509_52095} {RNA1310_17930.1, RNA1509_31491} {RNA1509_31491, RNA815_6889}
8.	MligTC455_43834	628	13.08	Mlig455_024930	Neo: - Age: -	SOX14	0.95	-	-	-	-	-	0.950	Mlig455_024930 {REF} {Length: 5050} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=86.2]; HMG-box domain [PF09011.12, score=43.1]} {Human: ENSG00000168875, SOX14, SRY-box 14, [Score=109, Expect=2e-27]; ENSG00000125285, SOX21, SRY-box 21, [Score=107, Expect=1e-26]; ENSG00000129194, SOX15, SRY-box 15, [Score=104, Expect=1e-25]; ENSG00000181449, SOX2, SRY-box 2, [Score=104, Expect=4e-25]} {Mouse: ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=109, Expect=1e-27]; ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=107, Expect=9e-27]; ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=104, Expect=3e-25]} {Dmel: FBgn0000411, D, dachs, [Score=116, Expect=3e-29]} {Celegans: WBGene00004949, sox-2, Transcription factor sox-2, [Score=107, Expect=1e-26]} {Smed: dd_Smed_v6_36521_0_1, dd_Smed_v6_36521_0_1, [Score=103, Expect=4e-25]} {RNA1509_6414} {RNA1310_19145.1} {RNA815_3816.1}

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