Data search
Results for MligTC455_28012
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28012 | 862 | 17.96 | Mlig455_005407 | Neo: - Age: Down-Down-Down |
Mlig455_005407 {REF} {Length: 126} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1780} {RNA1310_8217} {RNA815_80.1} |
Cumulative graph for MligTC455_28012
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.517 | 4.389 | 0.79650 | 1.00000 | |
| RegionR2 | -0.415 | 4.389 | 0.63009 | 0.97104 | |
| RegionR3 | -0.535 | 4.389 | 0.50363 | 0.99589 | |
| RegionR4 | 0.489 | 4.389 | 0.60767 | 0.91939 | |
| RegionR5 | 0.51 | 4.389 | 0.48870 | 0.85201 | |
| RegionR6 | -0.895 | 4.389 | 0.28497 | 0.87545 | |
| RegionR7 | 0.505 | 4.389 | 0.54387 | 1.00000 | |
| RegionR8 | 0.857 | 4.389 | 0.34225 | 0.97530 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.457 | 4.389 | 0.85326 | 1.00000 | |
| RegenerationR2 | 0.058 | 4.389 | 0.95638 | 1.00000 | |
| RegenerationR3 | 0.739 | 4.389 | 0.42613 | 0.81903 | |
| RegenerationR4 | 1.521 | 4.389 | 0.11258 | 0.51436 | |
| RegenerationR5 | 0.199 | 4.389 | 0.84322 | 1.00000 | |
| RegenerationR6 | 2.905 | 4.389 | 0.00272 | 0.05979 | |
| RegenerationBL | 1.377 | 4.389 | 0.09490 | 0.36186 | |
| RegenerationTP | 0.664 | 4.389 | 0.50337 | 0.90265 |
Genes with expression patterns similar to MligTC455_28012
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28012 | 862 | 17.96 | Mlig455_005407 | Neo: - Age: Down-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_005407 {REF} {Length: 126} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1780} {RNA1310_8217} {RNA815_80.1} | |
| 2. | MligTC455_28008 | 1580 | 32.91 | Mlig455_005374 | Neo: - Age: Down-Down-Up |
5.465 | 0.954 | 0.843 | 0.763 | 0.977 | 0.949 | 0.979 | Mlig455_005374 {REF} {Length: 1804} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=20.1]} {RNA1509_22337} {RNA1310_8217} {RNA815_80.1} | |
| 3. | MligTC455_31517 | 1266 | 26.38 | Mlig455_005506 | Neo: - |
1.86 | - | 0.897 | - | - | - | 0.963 | Mlig455_005506 {REF} {Length: 5380} {RNA1509_16377} {RNA1310_63485.1} {RNA815_34468.1} | |
| 4. | MligTC455_19669 | 811 | 16.89 | Mlig455_045322 | Neo: Int S/G2/M Age: - |
NUP62 | 1.679 | - | - | - | 0.723 | 0.956 | - | Mlig455_045322 {REF} {Length: 2009} {TRANSSPLICED} {Pfam: Nsp1-like C-terminal region [PF05064.15, score=93.5]} {Human: ENSG00000213024, NUP62, nucleoporin 62, [RH, Score=194, Expect=2e-54]} {Mouse: ENSMUSG00000109511, Nup62, nucleoporin 62, [RH, Score=195, Expect=8e-55]} {Dmel: FBgn0034118, Nup62, Nucleoporin 62kD, [RH, Score=162, Expect=4e-44]} {Smed: dd_Smed_v6_3978_0_1, dd_Smed_v6_3978_0_1, [RH, Score=127, Expect=8e-34]} {RNA1509_56898} {RNA1310_9604.1, RNA1509_56898} {RNA1509_56898, RNA815_24758} |
| 5. | MligTC455_01955 | 7 | 0.14 | Mlig455_061936 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_061936 {REF} {Length: 740} {NoTransDecoderORF} {RNA1310_48892} {RNA815_31782} |
Berezikov Lab - 2020-2021 © ERIBA