Data search
Results for MligTC455_28027
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28027 | 111 | 2.30 | Mlig455_042309 | Neo: - Age: Down-Down-Up Regeneration-upregulated R4: 4.422 Regeneration-enriched R4: 4.422 |
Mlig455_042309 {REF} {Length: 285} {NoTransDecoderORF} {RNA1509_1780} {RNA1310_8217} {RNA815_80.1} |
Cumulative graph for MligTC455_28027
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.468 | 2.01 | 0.24391 | 0.88999 | |
| RegionR2 | 1.568 | 2.01 | 0.13150 | 0.45025 | |
| RegionR3 | -1.167 | 2.01 | 0.24709 | 0.79008 | |
| RegionR4 | -2.775 | 2.01 | 0.02420 | 0.11658 | |
| RegionR5 | 0.282 | 2.01 | 0.64393 | 0.99604 | |
| RegionR6 | -1.119 | 2.01 | 0.30640 | 0.89774 | |
| RegionR7 | -0.399 | 2.01 | 0.82043 | 1.00000 | |
| RegionR8 | 1.142 | 2.01 | 0.45891 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.209 | 2.01 | 0.37605 | 1.00000 | |
| RegenerationR2 | 0.374 | 2.01 | 0.61218 | 0.92015 | |
| RegenerationR3 | 2.612 | 2.01 | 0.01465 | 0.22164 | |
| RegenerationR4 | 4.422 | 2.01 | 0.00006 | 0.00461 | Specific for R4: 4.422 |
| RegenerationR5 | 1.009 | 2.01 | 0.23086 | 0.66477 | |
| RegenerationR6 | 3.23 | 2.01 | 0.00214 | 0.05259 | |
| RegenerationBL | 2.198 | 2.01 | 0.05605 | 0.27440 | |
| RegenerationTP | 1.34 | 2.01 | 0.31535 | 0.76031 |
Genes with expression patterns similar to MligTC455_28027
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28027 | 111 | 2.3 | Mlig455_042309 | Neo: - Age: Down-Down-Up Regeneration-upregulated R4: 4.422 Regeneration-enriched R4: 4.422 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042309 {REF} {Length: 285} {NoTransDecoderORF} {RNA1509_1780} {RNA1310_8217} {RNA815_80.1} | |
| 2. | MligTC455_48899 | 248 | 5.16 | Mlig455_035208 | Neo: - Age: - |
POLRMT | 0.959 | - | - | 0.959 | - | - | - | Mlig455_035208 {REF} {Length: 3027} {Pfam: DNA-dependent RNA polymerase [PF00940.21, score=456.2]} {Human: ENSG00000099821, POLRMT, RNA polymerase mitochondrial, [RH, Score=528, Expect=9e-172]} {Mouse: ENSMUSG00000020329, Polrmt, polymerase (RNA) mitochondrial (DNA directed), [RH, Score=521, Expect=1e-170]} {Dmel: FBgn0261938, mtRNApol, mitochondrial RNA polymerase, [RH, Score=533, Expect=7e-173]} {Celegans: WBGene00013680, rpom-1, DNA-directed RNA polymerase, [RH, Score=429, Expect=9e-136]} {Smed: dd_Smed_v6_5515_0_1, dd_Smed_v6_5515_0_1, [RH, Score=514, Expect=8e-168]} {RNA1509_13294} {RNA1310_3023} {RNA815_8554} |
| 3. | MligTC455_25487 | 73 | 1.52 | Mlig455_006779 | Neo: - Age: - |
TTC28 | 0.957 | - | - | 0.957 | - | - | - | Mlig455_006779 {REF} {Length: 5941} {Pfam: Tetratricopeptide repeat [PF13424.8, score=84.4]; Tetratricopeptide repeat [PF13176.8, score=56.0]; Tetratricopeptide repeat [PF07719.19, score=55.9]; Tetratricopeptide repeat [PF00515.30, score=48.2]; Tetratricopeptide repeat [PF13181.8, score=43.2]} {Human: ENSG00000100154, TTC28, tetratricopeptide repeat domain 28, [Score=97.4, Expect=2e-19]} {Mouse: ENSMUSG00000033209, Ttc28, tetratricopeptide repeat domain 28, [Score=97.8, Expect=9e-20]} {Dmel: FBgn0262719, CG43163, [Score=98.6, Expect=4e-20]} {RNA1509_24017} {RNA1310_15919} {RNA815_6453} |
| 4. | MligTC455_31057 | 90 | 1.86 | Mlig455_055485 | Neo: - Age: - Region-enriched R2: 4.086/0.03047 |
0.955 | - | - | 0.955 | - | - | - | Mlig455_055485 {REF} {Length: 2200} {RNA1310_31820} {RNA815_35187} | |
| 5. | MligTC455_43802 | 1005 | 20.94 | Mlig455_027593, Mlig455_039459, Mlig455_046191 | Neo: - Age: - |
WASHC1 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_027593 {REF} {Length: 2493} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=169.9]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [RH, Score=152, Expect=5e-40]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [RH, Score=140, Expect=1e-35]} {Dmel: FBgn0033692, wash, washout, [Score=84.0, Expect=7e-17]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [RH, Score=122, Expect=4e-31]} {RNA1509_21860} {RNA1310_34415} {RNA815_16608} Mlig455_039459 {REF} {Length: 2392} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=168.5]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [RH, Score=152, Expect=4e-40]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [RH, Score=140, Expect=9e-36]} {Dmel: FBgn0033692, wash, washout, [Score=84.0, Expect=7e-17]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [RH, Score=123, Expect=3e-31]} {RNA1509_21860, RNA1509_56061} {RNA1310_34415, RNA1509_56061} {RNA1509_56061, RNA815_16608} Mlig455_046191 {REF} {Length: 2493} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=169.9]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [RH, Score=152, Expect=5e-40]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [RH, Score=140, Expect=1e-35]} {Dmel: FBgn0033692, wash, washout, [Score=84.0, Expect=7e-17]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [RH, Score=122, Expect=4e-31]} {RNA1509_21860} {RNA1310_34415, RNA1509_21860} {RNA1509_21860, RNA815_16608} |
| 6. | MligTC455_17925 | 131 | 2.73 | Mlig455_032376 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_032376 {REF} {Length: 2399} {RNA1509_14670, RNA1509_37387, RNA1509_38893} {RNA1310_26813.1, RNA1509_14670, RNA1509_38893} {RNA1509_14670, RNA1509_38893, RNA815_23526} |