Data search
Results for MligTC455_28051
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28051 | 807 | 16.82 | Mlig455_030809 | Neo: Int S/G2/M Age: Down-Up-Down |
NOC2L | Mlig455_030809 {REF} {Length: 2081} {Pfam: Noc2p family [PF03715.15, score=128.4]} {Human: ENSG00000188976, NOC2L, NOC2 like nucleolar associated transcriptional repressor, [RH, Score=198, Expect=3e-54]} {Mouse: ENSMUSG00000095567, Noc2l, NOC2 like nucleolar associated transcriptional repressor, [RH, Score=189, Expect=4e-52]} {Dmel: FBgn0032925, CG9246, [RH, Score=140, Expect=9e-35]} {Celegans: WBGene00007413, pro-2, Nucleolar complex protein 2 homolog, [RH, Score=101, Expect=3e-22]} {Smed: dd_Smed_v6_6278_0_1, dd_Smed_v6_6278_0_1, [RH, Score=89.7, Expect=4e-19]} {RNA1509_8413} {RNA1310_14791, RNA1509_8413} {RNA1509_8413, RNA815_5447} |
Cumulative graph for MligTC455_28051
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.174 | 4.332 | 0.38876 | 1.00000 | |
| RegionR2 | 0.169 | 4.332 | 0.72933 | 1.00000 | |
| RegionR3 | -0.191 | 4.332 | 0.65445 | 1.00000 | |
| RegionR4 | 0.39 | 4.332 | 0.37035 | 0.69356 | |
| RegionR5 | 0.699 | 4.332 | 0.04361 | 0.16976 | |
| RegionR6 | 0.292 | 4.332 | 0.46712 | 1.00000 | |
| RegionR7 | 0.061 | 4.332 | 0.91151 | 1.00000 | |
| RegionR8 | -0.246 | 4.332 | 0.75023 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.317 | 4.332 | 0.88034 | 1.00000 | |
| RegenerationR2 | -0.041 | 4.332 | 0.91220 | 1.00000 | |
| RegenerationR3 | 0.459 | 4.332 | 0.27069 | 0.70485 | |
| RegenerationR4 | 0.293 | 4.332 | 0.46351 | 0.84921 | |
| RegenerationR5 | 0.055 | 4.332 | 0.88040 | 1.00000 | |
| RegenerationR6 | 1.034 | 4.332 | 0.00769 | 0.10732 | |
| RegenerationBL | 0.706 | 4.332 | 0.14329 | 0.45132 | |
| RegenerationTP | 0.023 | 4.332 | 0.96776 | 1.00000 |
Genes with expression patterns similar to MligTC455_28051
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28051 | 807 | 16.82 | Mlig455_030809 | Neo: Int S/G2/M Age: Down-Up-Down |
NOC2L | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_030809 {REF} {Length: 2081} {Pfam: Noc2p family [PF03715.15, score=128.4]} {Human: ENSG00000188976, NOC2L, NOC2 like nucleolar associated transcriptional repressor, [RH, Score=198, Expect=3e-54]} {Mouse: ENSMUSG00000095567, Noc2l, NOC2 like nucleolar associated transcriptional repressor, [RH, Score=189, Expect=4e-52]} {Dmel: FBgn0032925, CG9246, [RH, Score=140, Expect=9e-35]} {Celegans: WBGene00007413, pro-2, Nucleolar complex protein 2 homolog, [RH, Score=101, Expect=3e-22]} {Smed: dd_Smed_v6_6278_0_1, dd_Smed_v6_6278_0_1, [RH, Score=89.7, Expect=4e-19]} {RNA1509_8413} {RNA1310_14791, RNA1509_8413} {RNA1509_8413, RNA815_5447} |
| 2. | MligTC455_49239 | 254 | 5.29 | Mlig455_002495 | Neo: - Age: - |
1.822 | - | - | - | 0.970 | 0.852 | - | Mlig455_002495 {REF} {Length: 1078} {NoTransDecoderORF} {RNA1509_1763} {RNA1310_14034.1} {RNA815_4894} | |
| 3. | MligTC455_45129 | 590 | 12.29 | Mlig455_017244 | Neo: - Age: - Regeneration-upregulated R6: 2.052 Regeneration-enriched R6: 2.052 |
NKRF | 0.975 | - | - | - | - | 0.975 | - | Mlig455_017244 {REF} {Length: 8558} {TRANSSPLICED} {Human: ENSG00000186416, NKRF, NFKB repressing factor, [Score=63.9, Expect=1e-09]} {Mouse: ENSMUSG00000044149, Nkrf, NF-kappaB repressing factor, [Score=68.2, Expect=4e-11]} {Smed: dd_Smed_v6_6505_0_1, dd_Smed_v6_6505_0_1, [RH, Score=136, Expect=4e-33]} {RNA1509_5026} {RNA1310_1815, RNA1509_5026} {RNA1509_5026, RNA815_1041.1} |
| 4. | MligTC455_49618 | 3111 | 64.81 | Mlig455_023147, Mlig455_023235, Mlig455_023302 | Neo: Irradiation Age: - Regeneration-upregulated R6: 1.248 Regeneration-enriched R6: 1.248 |
SMARCAD1 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_023147 {REF} {Length: 5106} {Pfam: SNF2-related domain [PF00176.25, score=186.9]; Type III restriction enzyme, res subunit [PF04851.17, score=36.7]; CUE domain [PF02845.18, score=23.0]; Helix-hairpin-helix motif [PF12836.9, score=21.6]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=18.4]} {Human: ENSG00000163104, SMARCAD1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [Score=362, Expect=1e-108]} {Mouse: ENSMUSG00000029920, Smarcad1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [Score=360, Expect=2e-108]} {Dmel: FBgn0032157, Etl1, [Score=310, Expect=2e-91]} {Celegans: WBGene00010845, M03C11.8, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog, [Score=290, Expect=2e-83]} {Smed: dd_Smed_v6_9378_0_1, dd_Smed_v6_9378_0_1, [Score=381, Expect=4e-115]} {RNA1509_18362, RNA1509_4745} {RNA1310_533.1, RNA1509_18362, RNA1509_4745} {RNA1509_18362, RNA1509_4745, RNA815_3531} Mlig455_023235 {REF} {Length: 4631} {Pfam: SNF2-related domain [PF00176.25, score=193.8]; Helicase conserved C-terminal domain [PF00271.33, score=68.5]; Type III restriction enzyme, res subunit [PF04851.17, score=35.9]; CUE domain [PF02845.18, score=23.0]; Helix-hairpin-helix motif [PF12836.9, score=21.1]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=17.9]} {Human: ENSG00000163104, SMARCAD1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [RH, Score=600, Expect=0.0]} {Mouse: ENSMUSG00000029920, Smarcad1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0032157, Etl1, [RH, Score=553, Expect=2e-179]} {Celegans: WBGene00010845, M03C11.8, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog, [RH, Score=507, Expect=2e-160]} {Smed: dd_Smed_v6_7560_0_1, dd_Smed_v6_7560_0_1, [RH, Score=595, Expect=0.0]} {RNA1509_18362} {RNA1310_533.1} {RNA815_3531} Mlig455_023302 {REF} {Length: 5083} {Pfam: SNF2-related domain [PF00176.25, score=192.9]; Helicase conserved C-terminal domain [PF00271.33, score=65.7]; Type III restriction enzyme, res subunit [PF04851.17, score=35.7]; CUE domain [PF02845.18, score=22.9]; Helix-hairpin-helix motif [PF12836.9, score=21.0]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=17.8]} {Human: ENSG00000163104, SMARCAD1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [RH, Score=602, Expect=0.0]} {Mouse: ENSMUSG00000029920, Smarcad1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [RH, Score=605, Expect=0.0]} {Dmel: FBgn0032157, Etl1, [RH, Score=551, Expect=2e-178]} {Celegans: WBGene00010845, M03C11.8, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog, [RH, Score=504, Expect=5e-159]} {Smed: dd_Smed_v6_7560_0_1, dd_Smed_v6_7560_0_1, [RH, Score=592, Expect=0.0]} {RNA1509_4745} {RNA1310_533.1} {RNA815_3531} |
| 5. | MligTC455_10078 | 251 | 5.22 | Mlig455_005645, Mlig455_005691 | Neo: - Age: - Region-enriched R4: 5.505/0.00346 |
0.953 | - | - | - | 0.953 | - | - | Mlig455_005645 {REF} {Length: 1477} {Smed: dd_Smed_v6_10422_0_4, dd_Smed_v6_10422_0_4, [Score=47.8, Expect=4e-07]} Mlig455_005691 {REF} {Length: 742} {Smed: dd_Smed_v6_10422_0_4, dd_Smed_v6_10422_0_4, [Score=47.8, Expect=4e-07]} |
|
| 6. | MligTC455_51593 | 6854 | 142.79 | Mlig455_051130, Mlig455_051206 | Neo: - Age: - |
HSPA9 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_051130 {REF} {Length: 3226} {Pfam: Hsp70 protein [PF00012.22, score=813.4]; MreB/Mbl protein [PF06723.15, score=31.7]} {Human: ENSG00000113013, HSPA9, heat shock protein family A (Hsp70) member 9, [Score=1009, Expect=0.0]} {Mouse: ENSMUSG00000024359, Hspa9, heat shock protein 9, [Score=1008, Expect=0.0]} {Dmel: FBgn0001220, Hsc70-5, Heat shock protein cognate 5, [Score=982, Expect=0.0]} {Celegans: WBGene00002010, hsp-6, Heat shock 70 kDa protein F, mitochondrial, [Score=941, Expect=0.0]} {Smed: dd_Smed_v6_424_0_1, dd_Smed_v6_424_0_1, [Score=999, Expect=0.0]} {RNA1509_139} {RNA1310_6572} {RNA815_1992} Mlig455_051206 {REF} {Length: 2867} {Pfam: Hsp70 protein [PF00012.22, score=894.1]; MreB/Mbl protein [PF06723.15, score=58.1]; Cell division protein FtsA [PF14450.8, score=21.2]} {Human: ENSG00000113013, HSPA9, heat shock protein family A (Hsp70) member 9, [RH, Score=1075, Expect=0.0]} {Mouse: ENSMUSG00000024359, Hspa9, heat shock protein 9, [RH, Score=1074, Expect=0.0]} {Dmel: FBgn0001220, Hsc70-5, Heat shock protein cognate 5, [RH, Score=1050, Expect=0.0]} {Celegans: WBGene00002010, hsp-6, Heat shock 70 kDa protein F, mitochondrial, [RH, Score=1007, Expect=0.0]} {Smed: dd_Smed_v6_424_0_1, dd_Smed_v6_424_0_1, [RH, Score=1066, Expect=0.0]} {RNA1509_139, RNA1509_17381} {RNA1310_6572, RNA1509_139, RNA1509_17381} {RNA1509_139, RNA1509_17381, RNA815_1992} |
| 7. | MligTC455_47541 | 986 | 20.54 | Mlig455_030800 | Neo: - Age: logFC(26M/2M)=1.237 |
PRPF3 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_030800 {REF} {Length: 2033} {TRANSSPLICED} {Pfam: pre-mRNA processing factor 3 (PRP3) [PF08572.12, score=218.0]; Protein of unknown function (DUF1115) [PF06544.14, score=122.9]} {Human: ENSG00000117360, PRPF3, pre-mRNA processing factor 3, [RH, Score=396, Expect=1e-129]} {Mouse: ENSMUSG00000015748, Prpf3, pre-mRNA processing factor 3, [RH, Score=396, Expect=8e-130]} {Dmel: FBgn0036915, Prp3, Precursor RNA processing 3, [RH, Score=403, Expect=7e-134]} {Celegans: WBGene00010844, prp-3, Yeast PRP (Splicing factor) related, [RH, Score=317, Expect=2e-100]} {Smed: dd_Smed_v6_5417_0_1, dd_Smed_v6_5417_0_1, [RH, Score=357, Expect=3e-117]} {RNA1509_46973} {RNA1310_13414} {RNA815_4827} |
| 8. | MligTC455_36413 | 686 | 14.29 | Mlig455_027517 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.020/0.01741 |
DDX10 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_027517 {REF} {Length: 2377} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.1]; Helicase conserved C-terminal domain [PF00271.33, score=84.3]; Domain of unknown function (DUF4217) [PF13959.8, score=39.3]} {Human: ENSG00000178105, DDX10, DEAD-box helicase 10, [RH, Score=430, Expect=2e-138]} {Mouse: ENSMUSG00000053289, Ddx10, DEAD (Asp-Glu-Ala-Asp) box polypeptide 10, [RH, Score=400, Expect=4e-127]} {Dmel: FBgn0030855, CG5800, [RH, Score=384, Expect=7e-122]} {Celegans: WBGene00021277, Y23H5B.6, RNA helicase, [RH, Score=412, Expect=1e-133]} {Smed: dd_Smed_v6_10133_0_1, dd_Smed_v6_10133_0_1, [Score=268, Expect=2e-81]} {RNA1509_10762, RNA1509_41952} {RNA1310_8808, RNA1509_41952} {RNA1509_41952, RNA815_3348.1} |