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Results for MligTC455_28067

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28067 47 0.98 Mlig455_020675

Neo: -

Age: Down-Down-Up

 Mlig455_020675 {REF} {Length: 5091} {Pfam: PH domain [PF00169.31, score=20.8]} {RNA1509_51524} {RNA1310_11242.1} {RNA815_5428.1}

Cumulative graph for MligTC455_28067

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.607 1.121 1.00000 1.00000
RegionR2 3.725 1.121 0.25576 0.63634
RegionR3 0.134 1.121 0.93075 1.00000
RegionR4 -0.301 1.121 0.62210 0.93183
RegionR5 -0.328 1.121 0.86377 1.00000
RegionR6 -0.489 1.121 1.00000 1.00000
RegionR7 0.404 1.121 0.82229 1.00000
RegionR8 -0.537 1.121 0.99986 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.668 1.121 1.00000 1.00000
RegenerationR2 1.294 1.121 0.58586 0.90900
RegenerationR3 3.08 1.121 0.27888 0.71188
RegenerationR4 1.591 1.121 0.53617 0.88673
RegenerationR5 2.6 1.121 0.28951 0.71736
RegenerationR6 3.963 1.121 0.20789 0.55059
RegenerationBL 3.67 1.121 0.19258 0.52757
RegenerationTP 3.377 1.121 0.35626 0.79706


Genes with expression patterns similar to MligTC455_28067

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28067 47 0.98 Mlig455_020675

Neo: -

Age: Down-Down-Up

 2 - - 1.000 - 1.000 - Mlig455_020675 {REF} {Length: 5091} {Pfam: PH domain [PF00169.31, score=20.8]} {RNA1509_51524} {RNA1310_11242.1} {RNA815_5428.1}
2. MligTC455_37128 155 3.22 Mlig455_066474, Mlig455_066476

Neo: -

Age: -

 1.849 - - 0.869 - 0.980 -

Mlig455_066474 {REF} {Length: 669} {Celegans: WBGene00022511, ZC53.4, [Score=68.6, Expect=3e-15]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=55.8, Expect=8e-11]} {RNA1509_53241} {RNA1310_47825} {RNA815_1671.1}

Mlig455_066476 {REF} {Length: 7427} {Pfam: Coilin N-terminus [PF15862.7, score=22.6]} {RNA1509_23774} {RNA1310_17710.2} {RNA815_1857}
3. MligTC455_38608 87 1.8 Mlig455_035941

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_035941 {REF} {Length: 2109} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=161.7]; Endonuclease-reverse transcriptase [PF14529.8, score=51.0]; RNase H [PF00075.26, score=49.2]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=27.2]; zinc-binding in reverse transcriptase [PF13966.8, score=20.0]} {Celegans: WBGene00022888, rnh-1.1, RNase H, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_13734_0_18, dd_Smed_v6_13734_0_18, [Score=73.2, Expect=3e-13]} {RNA1509_42121} {RNA1310_28357.1} {RNA815_28165.2}
4. MligTC455_08620 1219 25.4 Mlig455_030627, Mlig455_031014

Neo: -

Age: -

 0.961 - - - - 0.961 -

Mlig455_030627 {REF} {Length: 3798} {Pfam: NPH3 family [PF03000.16, score=41.6]; BTB/POZ domain [PF00651.33, score=29.0]} {Smed: dd_Smed_v6_8081_0_1, dd_Smed_v6_8081_0_1, [RH, Score=200, Expect=8e-56]} {RNA1509_15374} {RNA1310_7646.1} {RNA815_22293}

Mlig455_031014 {REF} {Length: 4355} {Pfam: NPH3 family [PF03000.16, score=39.7]; BTB/POZ domain [PF00651.33, score=29.0]} {Smed: dd_Smed_v6_8081_0_1, dd_Smed_v6_8081_0_1, [RH, Score=199, Expect=2e-55]} {RNA1509_15374, RNA1509_35186} {RNA1310_5657, RNA1509_35186} {RNA1509_35186, RNA815_22293}
5. MligTC455_39270 44 0.92 Mlig455_031895

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_031895 {REF} {Length: 1332} {Pfam: Adenovirus endoprotease [PF00770.20, score=20.9]} {RNA1509_37388} {RNA1310_436.1} {RNA815_24633}
6. MligTC455_16749 454 9.45 Mlig455_001550, Mlig455_046548

Neo: -

Age: logFC(26M/2M)=0.515

Region-specific R2: 4.360

Region-enriched R2: 3.409/0.00015

 TRAF4 0.952 - - - - 0.952 -

Mlig455_001550 {REF} {Length: 4563} {Pfam: TRAF-type zinc finger [PF02176.20, score=81.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.3]; Seven in absentia protein family [PF03145.18, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.4]; zf-RING of BARD1-type protein [PF14835.8, score=20.3]; Ring finger domain [PF13639.8, score=19.5]} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [Score=237, Expect=4e-72]} {Mouse: ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [Score=241, Expect=7e-74]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=164, Expect=1e-44]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [RH, Score=276, Expect=1e-87]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [RH, Score=592, Expect=0.0]} {RNA1509_20900} {RNA1310_14813, RNA1509_20900} {RNA1509_20900, RNA815_2335.1}

Mlig455_046548 {REF} {Length: 3881} {Pfam: TRAF-type zinc finger [PF02176.20, score=81.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.3]; Seven in absentia protein family [PF03145.18, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.4]; zf-RING of BARD1-type protein [PF14835.8, score=20.3]; Ring finger domain [PF13639.8, score=19.5]} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [Score=236, Expect=1e-71]} {Mouse: ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [Score=240, Expect=3e-73]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=164, Expect=9e-45]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [RH, Score=275, Expect=6e-87]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [RH, Score=592, Expect=0.0]} {RNA1509_20900} {RNA1310_14813} {RNA815_2335.1}
7. MligTC455_40768 386 8.04 Mlig455_053989

Neo: -

Age: Down-Down-Up

 0.951 - - - - 0.951 - Mlig455_053989 {REF} {Length: 1232} {TRANSSPLICED} {Pfam: zinc-RING finger domain [PF14634.8, score=20.4]} {RNA1509_39917} {RNA1310_28122, RNA1509_39917}

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