TomoSeq data search

Data search

Results for MligTC455_28238

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_28238	131	2.72	Mlig455_000183, Mlig455_067263	Neo: - Age: Up-Down-Up		Mlig455_000183 {REF} {Length: 3363} {RNA1509_8692} {RNA1310_57959} {RNA815_1557} Mlig455_067263 {REF} {Length: 337} {NoTransDecoderORF} {RNA1509_8692} {RNA1310_886.5} {RNA815_1557}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_28238

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.402	1.943	0.10012	0.66786
RegionR2	3.568	1.943	0.00362	0.05200
RegionR3	1.757	1.943	0.19265	0.73033
RegionR4	0.512	1.943	0.58509	0.90089
RegionR5	1.252	1.943	0.31673	0.65707
RegionR6	1.717	1.943	0.21527	0.79317
RegionR7	-1.655	1.943	0.56718	1.00000
RegionR8	-0.749	1.943	0.76473	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.352	1.943	0.85325	1.00000
RegenerationR2	0.293	1.943	0.63794	0.93073
RegenerationR3	2.093	1.943	0.01480	0.22228
RegenerationR4	1.797	1.943	0.02457	0.25138
RegenerationR5	2.102	1.943	0.00629	0.14470
RegenerationR6	1.547	1.943	0.10043	0.39328
RegenerationBL	2.883	1.943	0.02001	0.15292
RegenerationTP	3.708	1.943	0.00953	0.16541

Genes with expression patterns similar to MligTC455_28238

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28238	131	2.72	Mlig455_000183, Mlig455_067263	Neo: - Age: Up-Down-Up		4	-	-	1.000	1.000	1.000	1.000	Mlig455_000183 {REF} {Length: 3363} {RNA1509_8692} {RNA1310_57959} {RNA815_1557} Mlig455_067263 {REF} {Length: 337} {NoTransDecoderORF} {RNA1509_8692} {RNA1310_886.5} {RNA815_1557}
2.	MligTC455_20536	1039	21.64	Mlig455_023810	Neo: Irradiation Age: -	CPPED1	0.96	-	-	-	0.960	-	-	Mlig455_023810 {REF} {Length: 1933} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=34.7]} {Human: ENSG00000103381, CPPED1, calcineurin like phosphoesterase domain containing 1, [RH, Score=228, Expect=1e-72]} {Mouse: ENSMUSG00000065979, Cpped1, calcineurin-like phosphoesterase domain containing 1, [RH, Score=229, Expect=2e-73]} {Smed: dd_Smed_v6_1690_0_2, dd_Smed_v6_1690_0_2, [RH, Score=233, Expect=2e-75]} {RNA1509_11740} {RNA1310_27956, RNA1509_11740} {RNA1509_11740, RNA815_11890.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_28238

131

2.72

Mlig455_000183, Mlig455_067263

Neo: -

Age: Up-Down-Up

1.000

Mlig455_000183 {REF} {Length: 3363} {RNA1509_8692} {RNA1310_57959} {RNA815_1557}

Mlig455_067263 {REF} {Length: 337} {NoTransDecoderORF} {RNA1509_8692} {RNA1310_886.5} {RNA815_1557}

MligTC455_20536

1039

21.64

Mlig455_023810

Neo: Irradiation

Age: -

CPPED1

0.96

0.960

Mlig455_023810 {REF} {Length: 1933} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=34.7]} {Human: ENSG00000103381, CPPED1, calcineurin like phosphoesterase domain containing 1, [RH, Score=228, Expect=1e-72]} {Mouse: ENSMUSG00000065979, Cpped1, calcineurin-like phosphoesterase domain containing 1, [RH, Score=229, Expect=2e-73]} {Smed: dd_Smed_v6_1690_0_2, dd_Smed_v6_1690_0_2, [RH, Score=233, Expect=2e-75]} {RNA1509_11740} {RNA1310_27956, RNA1509_11740} {RNA1509_11740, RNA815_11890.1}