M. lignano Tomo-Seq
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Results for MligTC455_28274

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28274 4488 93.51 Mlig455_017415

Neo: -

Age: logFC(26M/2M)=-0.375

 MYH10 Mlig455_017415 {REF} {Length: 11647} {Pfam: Myosin head (motor domain) [PF00063.23, score=994.1]; Myosin tail [PF01576.21, score=882.8]; Myosin N-terminal SH3-like domain [PF02736.21, score=48.6]; IQ calmodulin-binding motif [PF00612.29, score=18.9]} {Human: ENSG00000133026, MYH10, myosin heavy chain 10, [RH, Score=1923, Expect=0.0]; ENSG00000276480, MYH11, myosin heavy chain 11, [RH, Score=1917, Expect=0.0]; ENSG00000133392, MYH11, myosin heavy chain 11, [RH, Score=1917, Expect=0.0]; ENSG00000100345, MYH9, myosin heavy chain 9, [RH, Score=1906, Expect=0.0]} {Mouse: ENSMUSG00000020900, Myh10, myosin, heavy polypeptide 10, non-muscle, [RH, Score=1920, Expect=0.0]; ENSMUSG00000022443, Myh9, myosin, heavy polypeptide 9, non-muscle, [RH, Score=1911, Expect=0.0]; ENSMUSG00000018830, Myh11, myosin, heavy polypeptide 11, smooth muscle, [RH, Score=1891, Expect=0.0]} {Dmel: FBgn0265434, zip, zipper, [RH, Score=1942, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [RH, Score=1701, Expect=0.0]} {Smed: dd_Smed_v6_791_0_1, dd_Smed_v6_791_0_1, [RH, Score=1850, Expect=0.0]} {RNA1509_16565, RNA1509_25857, RNA1509_4960} {RNA1310_266.1, RNA1509_16565, RNA1509_25857} {RNA1509_16565, RNA1509_25857, RNA815_160.1}

Cumulative graph for MligTC455_28274

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.979 6.613 0.09098 0.64863
RegionR2 -0.532 6.613 0.04816 0.26064
RegionR3 -0.348 6.613 0.12942 0.61808
RegionR4 0.622 6.613 0.01662 0.08917
RegionR5 0.572 6.613 0.00575 0.03856
RegionR6 0.94 6.613 0.00001 0.00114
RegionR7 -0.431 6.613 0.13703 0.69359
RegionR8 0.156 6.613 0.63573 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.749 6.613 0.29810 0.99429
RegenerationR2 0.5 6.613 0.04192 0.33792
RegenerationR3 0.653 6.613 0.01225 0.20326
RegenerationR4 0.264 6.613 0.30947 0.74964
RegenerationR5 0.313 6.613 0.19908 0.63180
RegenerationR6 0.118 6.613 0.63360 0.88924
RegenerationBL 0.501 6.613 0.04730 0.24898
RegenerationTP 0.347 6.613 0.23455 0.68038


Genes with expression patterns similar to MligTC455_28274

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28274 4488 93.51 Mlig455_017415

Neo: -

Age: logFC(26M/2M)=-0.375

 MYH10 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_017415 {REF} {Length: 11647} {Pfam: Myosin head (motor domain) [PF00063.23, score=994.1]; Myosin tail [PF01576.21, score=882.8]; Myosin N-terminal SH3-like domain [PF02736.21, score=48.6]; IQ calmodulin-binding motif [PF00612.29, score=18.9]} {Human: ENSG00000133026, MYH10, myosin heavy chain 10, [RH, Score=1923, Expect=0.0]; ENSG00000276480, MYH11, myosin heavy chain 11, [RH, Score=1917, Expect=0.0]; ENSG00000133392, MYH11, myosin heavy chain 11, [RH, Score=1917, Expect=0.0]; ENSG00000100345, MYH9, myosin heavy chain 9, [RH, Score=1906, Expect=0.0]} {Mouse: ENSMUSG00000020900, Myh10, myosin, heavy polypeptide 10, non-muscle, [RH, Score=1920, Expect=0.0]; ENSMUSG00000022443, Myh9, myosin, heavy polypeptide 9, non-muscle, [RH, Score=1911, Expect=0.0]; ENSMUSG00000018830, Myh11, myosin, heavy polypeptide 11, smooth muscle, [RH, Score=1891, Expect=0.0]} {Dmel: FBgn0265434, zip, zipper, [RH, Score=1942, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [RH, Score=1701, Expect=0.0]} {Smed: dd_Smed_v6_791_0_1, dd_Smed_v6_791_0_1, [RH, Score=1850, Expect=0.0]} {RNA1509_16565, RNA1509_25857, RNA1509_4960} {RNA1310_266.1, RNA1509_16565, RNA1509_25857} {RNA1509_16565, RNA1509_25857, RNA815_160.1}
2. MligTC455_28275 4467 93.06 Mlig455_017488

Neo: -

Age: Up-Down-Up

 MYH10 5.903 0.997 0.998 0.998 0.985 0.955 0.970 Mlig455_017488 {REF} {Length: 7838} {Pfam: Myosin head (motor domain) [PF00063.23, score=994.6]; Myosin tail [PF01576.21, score=880.2]; Myosin N-terminal SH3-like domain [PF02736.21, score=48.6]; IQ calmodulin-binding motif [PF00612.29, score=18.9]} {Human: ENSG00000133026, MYH10, myosin heavy chain 10, [RH, Score=1922, Expect=0.0]; ENSG00000276480, MYH11, myosin heavy chain 11, [RH, Score=1913, Expect=0.0]; ENSG00000133392, MYH11, myosin heavy chain 11, [RH, Score=1913, Expect=0.0]; ENSG00000100345, MYH9, myosin heavy chain 9, [RH, Score=1902, Expect=0.0]} {Mouse: ENSMUSG00000020900, Myh10, myosin, heavy polypeptide 10, non-muscle, [RH, Score=1920, Expect=0.0]; ENSMUSG00000022443, Myh9, myosin, heavy polypeptide 9, non-muscle, [RH, Score=1906, Expect=0.0]; ENSMUSG00000018830, Myh11, myosin, heavy polypeptide 11, smooth muscle, [RH, Score=1889, Expect=0.0]} {Dmel: FBgn0265434, zip, zipper, [RH, Score=1941, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [RH, Score=1699, Expect=0.0]} {Smed: dd_Smed_v6_791_0_1, dd_Smed_v6_791_0_1, [RH, Score=1850, Expect=0.0]} {RNA1509_49097, RNA1509_4960} {RNA1310_266.1, RNA1509_49097, RNA1509_4960} {RNA1509_49097, RNA1509_4960, RNA815_160.1}
3. MligTC455_50961 470 9.79 Mlig455_045822

Neo: Neoblast

Age: Down-Up-Up

Region-enriched R4: 1.832/0.00367
Region-enriched R5: 1.263/0.00390

Regeneration-enriched BL: 2.821
Regeneration-enriched R6: 2.445

 0.951 - - - - 0.951 - Mlig455_045822 {REF} {Length: 2062} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF3837) [PF12939.9, score=24.2]; CAMSAP CH domain [PF11971.10, score=23.1]} {RNA1509_29543, RNA1509_7893} {RNA1310_12554, RNA1509_29543, RNA1509_7893} {RNA1509_29543, RNA1509_7893, RNA815_2669.1}

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