TomoSeq data search

Data search

Results for MligTC455_28316

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28316

202

4.21

Mlig455_008902, Mlig455_042656, Mlig455_043860, Mlig455_047013

Neo: -

Age: Up-Down-Up

Mlig455_008902 {REF} {Length: 534} {NoTransDecoderORF} {RNA1509_13847} {RNA1310_14676} {RNA815_5428.1}

Mlig455_042656 {REF} {Length: 2848} {NoTransDecoderORF} {RNA1509_13847} {RNA1310_14467} {RNA815_5428.1}

Mlig455_043860 {REF} {Length: 661} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_77757} {RNA815_23623}

Mlig455_047013 {REF} {Length: 3020} {NoTransDecoderORF} {RNA1509_13847} {RNA1310_14467} {RNA815_5428.1}

Cumulative graph for MligTC455_28316

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	2.812	2.526	0.12563	0.72044
RegionR2	-0.066	2.526	0.96249	1.00000
RegionR3	-1.41	2.526	0.07388	0.48144
RegionR4	0.101	2.526	0.88894	1.00000
RegionR5	-2.824	2.526	0.00067	0.00743
RegionR6	-1.11	2.526	0.16995	0.72660
RegionR7	0.674	2.526	0.45506	1.00000
RegionR8	1.823	2.526	0.06472	0.49306

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.136	2.526	0.12599	0.85691
RegenerationR2	1.11	2.526	0.06098	0.40583
RegenerationR3	2.008	2.526	0.01623	0.23323
RegenerationR4	0.595	2.526	0.46077	0.84789
RegenerationR5	2.862	2.526	0.00121	0.05800
RegenerationR6	1.884	2.526	0.02406	0.19292
RegenerationBL	0.571	2.526	0.50017	0.86495
RegenerationTP	-0.71	2.526	0.44096	0.86054

Genes with expression patterns similar to MligTC455_28316

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28316	202	4.21	Mlig455_008902, Mlig455_042656, Mlig455_043860, Mlig455_047013	Neo: - Age: Up-Down-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008902 {REF} {Length: 534} {NoTransDecoderORF} {RNA1509_13847} {RNA1310_14676} {RNA815_5428.1} Mlig455_042656 {REF} {Length: 2848} {NoTransDecoderORF} {RNA1509_13847} {RNA1310_14467} {RNA815_5428.1} Mlig455_043860 {REF} {Length: 661} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_77757} {RNA815_23623} Mlig455_047013 {REF} {Length: 3020} {NoTransDecoderORF} {RNA1509_13847} {RNA1310_14467} {RNA815_5428.1}
2.	MligTC455_24774	198	4.11	Mlig455_033948	Neo: - Age: -	LRIG3	1.74	0.785	-	0.955	-	-	-	Mlig455_033948 {REF} {Length: 5691} {Pfam: Leucine rich repeat [PF13855.8, score=88.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=64.5]; Leucine-rich repeat [PF14580.8, score=23.0]} {Human: ENSG00000139263, LRIG3, leucine rich repeats and immunoglobulin like domains 3, [Score=59.3, Expect=5e-08]} {Mouse: ENSMUSG00000020105, Lrig3, leucine-rich repeats and immunoglobulin-like domains 3, [Score=64.7, Expect=6e-10]} {Dmel: FBgn0029114, Tollo, [Score=59.3, Expect=2e-08]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_11527_0_1, dd_Smed_v6_11527_0_1, [Score=54.7, Expect=2e-07]} {RNA1509_25651} {RNA1310_2369, RNA1509_25651} {RNA1509_25651, RNA815_18102}
3.	MligTC455_49365	148	3.08	Mlig455_017917	Neo: - Age: logFC(26M/2M)=-0.372		1.685	-	-	0.953	-	0.732	-	Mlig455_017917 {REF} {Length: 1359} {RNA1310_37310.3} {RNA815_21947}
4.	MligTC455_32083	95	1.99	Mlig455_041859	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.653		1.665	-	-	0.954	-	0.711	-	Mlig455_041859 {REF} {Length: 2652} {TRANSSPLICED} {RNA1509_19305} {RNA1310_20429.1} {RNA815_7869}
5.	MligTC455_53007	3264	68.01	Mlig455_024873, Mlig455_029267, Mlig455_060833	Neo: - Age: logFC(26M/2M)=-0.318		0.977	-	-	-	-	0.977	-	Mlig455_024873 {REF} {Length: 782} {TRANSSPLICED} {RNA1509_35561, RNA1509_52245} {RNA1310_52621, RNA1509_52245} {RNA1509_52245, RNA815_18757.1} Mlig455_029267 {REF} {Length: 719} {TRANSSPLICED} {RNA1509_35561} {RNA1310_52621} {RNA815_21429.1} Mlig455_060833 {REF} {Length: 719} {TRANSSPLICED} {RNA1509_35561, RNA1509_49499} {RNA1310_52621, RNA1509_49499} {RNA1509_49499, RNA815_21429.1}
6.	MligTC455_12314	120	2.5	Mlig455_010420	Neo: - Age: -	HDC	0.975	-	-	0.975	-	-	-	Mlig455_010420 {REF} {Length: 2937} {Pfam: Pyridoxal-dependent decarboxylase conserved domain [PF00282.21, score=449.3]} {Human: ENSG00000140287, HDC, histidine decarboxylase, [RH, Score=517, Expect=5e-176]} {Mouse: ENSMUSG00000027360, Hdc, histidine decarboxylase, [RH, Score=506, Expect=1e-171]} {Dmel: FBgn0050446, Tdc2, Tyrosine decarboxylase 2, [RH, Score=582, Expect=0.0]} {Celegans: WBGene00006562, tdc-1, Tyrosine decarboxylase, [RH, Score=545, Expect=0.0]} {Smed: dd_Smed_v6_11320_0_1, dd_Smed_v6_11320_0_1, [Score=470, Expect=3e-160]} {RNA1310_34123} {RNA815_44610}
7.	MligTC455_12955	81	1.7	Mlig455_010928, Mlig455_033156	Neo: - Age: -		0.97	-	-	-	-	0.970	-	Mlig455_010928 {REF} {Length: 736} {NoTransDecoderORF} {RNA1310_133923} Mlig455_033156 {REF} {Length: 1764} {NoTransDecoderORF} {RNA1310_129683}
8.	MligTC455_32419	319	6.65	Mlig455_013944	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.686	NWD2	0.963	-	-	-	-	0.963	-	Mlig455_013944 {REF} {Length: 3190} {TRANSSPLICED} {Pfam: Dpy-30 motif [PF05186.15, score=33.8]; AAA ATPase domain [PF13191.8, score=29.3]; NACHT domain [PF05729.14, score=19.8]; ATPase domain predominantly from Archaea [PF01637.20, score=19.1]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=130, Expect=2e-30]; ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=128, Expect=9e-30]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=127, Expect=2e-29]; ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=121, Expect=9e-28]} {Dmel: FBgn0038397, CG10185, [Score=193, Expect=6e-51]} {Celegans: WBGene00020254, T05C3.2, [Score=196, Expect=9e-52]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [Score=83.2, Expect=3e-16]} {RNA1509_34526} {RNA1310_322} {RNA815_139.1}
9.	MligTC455_07984	111	2.32	Mlig455_050041	Neo: - Age: -		0.961	-	-	0.961	-	-	-	Mlig455_050041 {REF} {Length: 355} {Pfam: Essential protein Yae1, N terminal [PF09811.11, score=22.7]}
10.	MligTC455_52121	259	5.39	Mlig455_064002, Mlig455_064040	Neo: - Age: -	MTMR14	0.96	-	-	-	-	0.960	-	Mlig455_064002 {REF} {Length: 2473} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=23.7]} {Human: ENSG00000163719, MTMR14, myotubularin related protein 14, [Score=187, Expect=6e-53]} {Mouse: ENSMUSG00000030269, Mtmr14, myotubularin related protein 14, [Score=189, Expect=4e-53]} {Dmel: FBgn0027506, EDTP, Egg-derived tyrosine phosphatase, [Score=189, Expect=1e-52]} {Smed: dd_Smed_v6_6564_0_4, dd_Smed_v6_6564_0_4, [Score=208, Expect=7e-62]} {RNA1509_39844} {RNA1310_22218.1} {RNA815_24909} Mlig455_064040 {REF} {Length: 2467} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=25.1]} {Human: ENSG00000163719, MTMR14, myotubularin related protein 14, [Score=183, Expect=1e-51]} {Mouse: ENSMUSG00000030269, Mtmr14, myotubularin related protein 14, [Score=185, Expect=1e-51]} {Dmel: FBgn0027506, EDTP, Egg-derived tyrosine phosphatase, [Score=190, Expect=4e-53]} {Smed: dd_Smed_v6_6564_0_4, dd_Smed_v6_6564_0_4, [Score=206, Expect=2e-61]} {RNA1509_39844} {RNA1310_22218.1, RNA1509_39844} {RNA1509_39844, RNA815_24909}
11.	MligTC455_20163	251	5.24	Mlig455_011698	Neo: - Age: Down-Up-Down	TEDC1	0.957	-	-	-	-	0.957	-	Mlig455_011698 {REF} {Length: 3339} {TRANSSPLICED} {Pfam: Tubulin epsilon and delta complex protein 1 [PF14970.8, score=140.0]} {Human: ENSG00000185347, TEDC1, tubulin epsilon and delta complex 1, [RH, Score=81.3, Expect=4e-16]} {Mouse: ENSMUSG00000037466, Tedc1, tubulin epsilon and delta complex 1, [RH, Score=62.8, Expect=3e-10]} {Smed: dd_Smed_v6_15829_0_1, dd_Smed_v6_15829_0_1, [RH, Score=72.0, Expect=9e-14]} {RNA1509_17453, RNA1509_27695} {RNA1310_8427.1, RNA1509_17453, RNA1509_27695} {RNA1509_17453, RNA1509_27695, RNA815_8179.1}
12.	MligTC455_24504	87	1.82	Mlig455_003723	Neo: - Age: Down-Up-Down		0.956	-	-	0.956	-	-	-	Mlig455_003723 {REF} {Length: 3478} {RNA1509_4070} {RNA1310_895.1} {RNA815_1055}

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