TomoSeq data search

Data search

Results for MligTC455_28342

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_28342	111	2.31	Mlig455_041774	Neo: - Age: -		Mlig455_041774 {REF} {Length: 2955} {RNA1509_44743} {RNA1310_38888.1} {RNA815_7717.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_28342

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.294	1.97	0.55378	1.00000
RegionR2	0.608	1.97	0.59925	0.95004
RegionR3	-0.045	1.97	0.87845	1.00000
RegionR4	1.692	1.97	0.14494	0.39087
RegionR5	-0.244	1.97	0.92906	1.00000
RegionR6	-0.022	1.97	0.87048	1.00000
RegionR7	-0.441	1.97	0.95638	1.00000
RegionR8	1.747	1.97	0.31966	0.95399

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	4.433	1.97	0.42500	1.00000
RegenerationR2	0.089	1.97	0.89954	1.00000
RegenerationR3	0.821	1.97	0.36272	0.77851
RegenerationR4	-0.133	1.97	0.86827	1.00000
RegenerationR5	1.037	1.97	0.22070	0.65549
RegenerationR6	0.821	1.97	0.37904	0.72044
RegenerationBL	0.038	1.97	0.97160	1.00000
RegenerationTP	1.197	1.97	0.31611	0.76096

Genes with expression patterns similar to MligTC455_28342

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28342	111	2.31	Mlig455_041774	Neo: - Age: -		5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_041774 {REF} {Length: 2955} {RNA1509_44743} {RNA1310_38888.1} {RNA815_7717.1}
2.	MligTC455_28423	910	18.95	Mlig455_044827	Neo: - Age: - Region-enriched R4: 1.117/0.02139 Regeneration-depleted R6: -1.909 Regeneration-depleted R4: -1.311		1.693	0.951	-	-	0.742	-	-	Mlig455_044827 {REF} {Length: 3804} {Pfam: Tissue inhibitor of metalloproteinase [PF00965.19, score=33.3]; UNC-6/NTR/C345C module [PF01759.23, score=31.6]} {RNA1509_9061} {RNA1310_22893.1} {RNA815_2629}
3.	MligTC455_48103	628	13.08	Mlig455_057218	Neo: - Age: Up-Up-Down	RGS22	0.978	-	-	-	0.978	-	-	Mlig455_057218 {REF} {Length: 3461} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=26.0]} {Human: ENSG00000132554, RGS22, regulator of G protein signaling 22, [RH, Score=72.4, Expect=3e-12]} {Mouse: ENSMUSG00000037627, Rgs22, regulator of G-protein signalling 22, [RH, Score=56.6, Expect=1e-07]} {Smed: dd_Smed_v6_11778_0_1, dd_Smed_v6_11778_0_1, [Score=246, Expect=4e-68]} {RNA1509_2536} {RNA1310_3477} {RNA815_616.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_28342

111

2.31

Mlig455_041774

Neo: -

Age: -

1.000

Mlig455_041774 {REF} {Length: 2955} {RNA1509_44743} {RNA1310_38888.1} {RNA815_7717.1}

MligTC455_28423

910

18.95

Mlig455_044827

Neo: -

Age: -

Region-enriched R4: 1.117/0.02139

Regeneration-depleted R6: -1.909
Regeneration-depleted R4: -1.311

1.693

0.951

0.742

Mlig455_044827 {REF} {Length: 3804} {Pfam: Tissue inhibitor of metalloproteinase [PF00965.19, score=33.3]; UNC-6/NTR/C345C module [PF01759.23, score=31.6]} {RNA1509_9061} {RNA1310_22893.1} {RNA815_2629}

MligTC455_48103

628

13.08

Mlig455_057218

Neo: -

Age: Up-Up-Down

RGS22

0.978

Mlig455_057218 {REF} {Length: 3461} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=26.0]} {Human: ENSG00000132554, RGS22, regulator of G protein signaling 22, [RH, Score=72.4, Expect=3e-12]} {Mouse: ENSMUSG00000037627, Rgs22, regulator of G-protein signalling 22, [RH, Score=56.6, Expect=1e-07]} {Smed: dd_Smed_v6_11778_0_1, dd_Smed_v6_11778_0_1, [Score=246, Expect=4e-68]} {RNA1509_2536} {RNA1310_3477} {RNA815_616.1}