Data search


search
Exact
Search

Results for MligTC455_28372

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28372 1189 24.77 Mlig455_034299

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.243

Mlig455_034299 {REF} {Length: 2736} {TRANSSPLICED} {RNA1509_15691, RNA1509_30839, RNA1509_55383} {RNA1310_5101.1, RNA1509_15691, RNA1509_30839, RNA1509_55383} {RNA1509_15691, RNA1509_30839, RNA1509_55383, RNA815_7418.1}

Cumulative graph for MligTC455_28372

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.447 4.875 0.08472 0.63289
RegionR2 0.44 4.875 0.38213 0.77694
RegionR3 0.368 4.875 0.38694 0.91826
RegionR4 0.492 4.875 0.31543 0.63115
RegionR5 -0.217 4.875 0.62755 0.98110
RegionR6 0.523 4.875 0.21050 0.78784
RegionR7 0.959 4.875 0.04252 0.39597
RegionR8 -0.116 4.875 0.86857 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.483 4.875 0.13119 0.86336
RegenerationR2 0.411 4.875 0.31919 0.75744
RegenerationR3 0.229 4.875 0.60677 0.91130
RegenerationR4 0.136 4.875 0.77098 0.97686
RegenerationR5 0.623 4.875 0.15423 0.57390
RegenerationR6 0.067 4.875 0.88049 1.00000
RegenerationBL 0.189 4.875 0.68873 1.00000
RegenerationTP -0.095 4.875 0.86268 1.00000


Genes with expression patterns similar to MligTC455_28372

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28372 1189 24.77 Mlig455_034299

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.243

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_034299 {REF} {Length: 2736} {TRANSSPLICED} {RNA1509_15691, RNA1509_30839, RNA1509_55383} {RNA1310_5101.1, RNA1509_15691, RNA1509_30839, RNA1509_55383} {RNA1509_15691, RNA1509_30839, RNA1509_55383, RNA815_7418.1}
2. MligTC455_17264 2404 50.07 Mlig455_068018

Neo: -

Age: -

1.667 - - 0.713 0.954 - - Mlig455_068018 {REF} {Length: 1850} {TRANSSPLICED} {RNA1509_4562} {RNA1310_28355.1, RNA1509_4562} {RNA1509_4562, RNA815_12304.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA